GO:0006355

GO:0006355

regulation of transcription, DNA-dependent

Biological Process

Parent nodes

GO:0006351	transcription, DNA-dependent
GO:0045449	regulation of transcription

8 child nodes

ID	Term	Weight
GO:0000160	two-component signal transduction system (phosphorelay)	0.00000
GO:0006342	chromatin silencing	0.00000
GO:0045892	negative regulation of transcription, DNA-dependent	0.21954
GO:0045893	positive regulation of transcription, DNA-dependent	0.00000
GO:0006356	regulation of transcription from Pol I promoter	0.00000
GO:0006357	regulation of transcription from Pol II promoter	0.21954
GO:0006359	regulation of transcription from Pol III promoter	0.00000
GO:0006355a	regulation of transcription, DNA-dependent (annotated genes)	0.5609115

Performance on training data

• Error rate: 0.03704
• Performance: 0.25808
• Redundancy: 2.95226

	Sensitivity	Specificity
SQUAMOUS	0.78571	0.98347
other	0.98347	0.78571

Performance on test data

• Error rate: 0.01471
• Performance: 0.13993
• Redundancy: 3.09525

	Sensitivity	Specificity
SQUAMOUS	0.85714	1
other	1	0.85714

Predictions

	Class	SQUAMOUS	other	Predictionn
CL2001031606AA (testset)	SQUAMOUS	0.45124	0.54876	other
CL2001031607AA	other	0.04321	0.95679	other
CL2001031608AA	other	0.01946	0.98054	other
CL2001031609AA (testset)	other	0.02567	0.97433	other
CL2001031611AA	other	0.02628	0.97372	other
CL2001031612AA (testset)	other	0.14014	0.85986	other
CL2001031613AA (testset)	other	0.34911	0.65089	other
CL2001031615AA (testset)	other	0.01828	0.98172	other
CL2001031616AA	other	0.03505	0.96495	other
CL2001031618AA	other	0.02164	0.97836	other
CL2001031620AA	SQUAMOUS	0.83703	0.16297	SQUAMOUS
CL2001031621AA	SQUAMOUS	0.94329	0.05671	SQUAMOUS
CL2001031622AA	other	0.30922	0.69078	other
CL2001031625AA	other	0.01628	0.98372	other
CL2001031627AA (testset)	other	0.02223	0.97777	other
CL2001031628AA	other	0.01542	0.98458	other
CL2001031629AA	other	0.27718	0.72282	other
CL2001031630AA	other	0.01915	0.98085	other
CL2001031631AA (testset)	other	0.02481	0.97519	other
CL2001031632AA	other	0.06056	0.93944	other
CL2001031634AA	other	0.02115	0.97885	other
CL2001031635AA (testset)	other	0.01443	0.98557	other
CL2001031636AA (testset)	other	0.18614	0.81386	other
CL2001032002AA	other	0.02564	0.97436	other
CL2001032005AA	other	0.01666	0.98334	other
CL2001032008AA	other	0.06679	0.93321	other
CL2001032009AA	other	0.01468	0.98532	other
CL2001032010AA	other	0.01246	0.98754	other
CL2001032011AA	other	0.05461	0.94539	other
CL2001032012AA	other	0.01596	0.98404	other
CL2001032013AA	other	0.02014	0.97986	other
CL2001032015AA (testset)	other	0.03661	0.96339	other
CL2001032016AA (testset)	other	0.01485	0.98515	other
CL2001032019AA	other	0.04695	0.95305	other
CL2001032020AA (testset)	other	0.01412	0.98588	other
CL2001032025AA (testset)	other	0.02314	0.97686	other
CL2001032026AA	other	0.02048	0.97952	other
CL2001032027AA (testset)	other	0.05592	0.94408	other
CL2001032030AA (testset)	other	0.037	0.963	other
CL2001032031AA (testset)	other	0.02055	0.97945	other
CL2001032032AA	other	0.13112	0.86888	other
CL2001032034AA (testset)	other	0.01953	0.98047	other
CL2001032036AA	other	0.03452	0.96548	other
CL2001032041AA (testset)	other	0.02117	0.97883	other
CL2001032043AA	other	0.08465	0.91535	other
CL2001032044AA	other	0.02519	0.97481	other
CL2001032045AA (testset)	other	0.02809	0.97191	other
CL2001032046AA	other	0.01991	0.98009	other
CL2001032101AA	other	0.02073	0.97927	other
CL2001032102AA	other	0.01762	0.98238	other
CL2001032103AA	other	0.02019	0.97981	other
CL2001032104AA	other	0.02457	0.97543	other
CL2001032105AA	other	0.01464	0.98536	other
CL2001032107AA	other	0.02816	0.97184	other
CL2001032108AA (testset)	other	0.01842	0.98158	other
CL2001032109AA (testset)	other	0.01276	0.98724	other
CL2001032110AA	other	0.01754	0.98246	other
CL2001032111AA (testset)	other	0.03187	0.96813	other
CL2001032113AA	other	0.01623	0.98377	other
CL2001032114AA	other	0.01685	0.98315	other
CL2001032115AA	other	0.04931	0.95069	other
CL2001032116AA	other	0.01847	0.98153	other
CL2001032117AA (testset)	other	0.10624	0.89376	other
CL2001032121AA	other	0.03476	0.96524	other
CL2001032122AA	SQUAMOUS	0.88954	0.11046	SQUAMOUS
CL2001032124AA (testset)	other	0.01635	0.98365	other
CL2001032125AA	other	0.24338	0.75662	other
CL2001032127AA (testset)	other	0.02018	0.97982	other
CL2001032128AA (testset)	other	0.02944	0.97056	other
CL2001032129AA (testset)	SQUAMOUS	0.91046	0.08954	SQUAMOUS
CL2001032130AA	other	0.02141	0.97859	other
CL2001032132AA (testset)	other	0.01764	0.98236	other
CL2001032134AA	other	0.13601	0.86399	other
CL2001032135AA	other	0.10696	0.89304	other
CL2001032136AA (testset)	other	0.01939	0.98061	other
CL2001032138AA	other	0.01885	0.98115	other
CL2001032141AA	other	0.02988	0.97012	other
CL2001032142AA	other	0.29818	0.70182	other
CL2001032144AA	SQUAMOUS	0.84125	0.15875	SQUAMOUS
CL2001032145AA (testset)	other	0.01791	0.98209	other
CL2001032147AA (testset)	other	0.01958	0.98042	other
CL2001032149AA (testset)	other	0.13878	0.86122	other
CL2001032151AA (testset)	other	0.03354	0.96646	other
CL2001032152AA	other	0.01736	0.98264	other
CL2001032153AA (testset)	SQUAMOUS	0.75053	0.24947	SQUAMOUS
CL2001032155AA	other	0.34176	0.65824	other
CL2001032156AA	other	0.06961	0.93039	other
CL2001032202AA	other	0.02076	0.97924	other
CL2001032206AA (testset)	other	0.02302	0.97698	other
CL2001032207AA	SQUAMOUS	0.96112	0.03888	SQUAMOUS
CL2001032209AA (testset)	SQUAMOUS	0.99334	0.00666	SQUAMOUS
CL2001032210AA	other	0.01862	0.98138	other
CL2001032211AA (testset)	other	0.14828	0.85172	other
CL2001032212AA (testset)	other	0.01809	0.98191	other
CL2001032213AA	other	0.02455	0.97545	other
CL2001032214AA	other	0.1601	0.8399	other
CL2001032217AA (testset)	other	0.0393	0.9607	other
CL2001032218AA	SQUAMOUS	0.68011	0.31989	SQUAMOUS
CL2001032219AA	other	0.02422	0.97578	other
CL2001032220AA	other	0.02352	0.97648	other
CL2001032222AA	SQUAMOUS	0.79467	0.20533	SQUAMOUS
CL2001032229AA	other	0.01871	0.98129	other
CL2001032231AA	SQUAMOUS	0.49518	0.50482	other
CL2001032232AA (testset)	other	0.01516	0.98484	other
CL2001032233AA	other	0.01504	0.98496	other
CL2001032238AA (testset)	other	0.02042	0.97958	other
CL2001032239AA	SQUAMOUS	0.45954	0.54046	other
CL2001032240AA	SQUAMOUS	0.90694	0.09306	SQUAMOUS
CL2001032241AA	other	0.02179	0.97821	other
CL2001032242AA	other	0.04741	0.95259	other
CL2001032243AA (testset)	other	0.03059	0.96941	other
CL2001032248AA	other	0.17321	0.82679	other
CL2001032249AA	other	0.01885	0.98115	other
CL2001032252AA	other	0.44868	0.55132	other
CL2001032254AA (testset)	other	0.02665	0.97335	other
CL2001032255AA (testset)	other	0.0164	0.9836	other
CL2001032256AA	other	0.01484	0.98516	other
CL2001032259AA (testset)	other	0.05763	0.94237	other
CL2001032260AA (testset)	other	0.0224	0.9776	other
CL2001032301AA	other	0.05013	0.94987	other
CL2001032304AA	other	0.02363	0.97637	other
CL2001032305AA (testset)	SQUAMOUS	0.60798	0.39202	SQUAMOUS
CL2001032306AA	other	0.02709	0.97291	other
CL2001032307AA	other	0.09144	0.90856	other
CL2001032308AA	other	0.3115	0.6885	other
CL2001032309AA	other	0.02106	0.97894	other
CL2001032310AA	other	0.01533	0.98467	other
CL2001032311AA	other	0.14577	0.85423	other
CL2001032312AA	other	0.01843	0.98157	other
CL2001032313AA	other	0.01803	0.98197	other
CL2001032314AA	other	0.01725	0.98275	other
CL2001032316AA	other	0.03536	0.96464	other
CL2001032601AA	other	0.01935	0.98065	other
CL2001032602AA (testset)	other	0.01981	0.98019	other
CL2001032604AA (testset)	other	0.01829	0.98171	other
CL2001032607AA (testset)	other	0.01791	0.98209	other
CL2001032608AA	SQUAMOUS	0.86669	0.13331	SQUAMOUS
CL2001032610AA	other	0.0144	0.9856	other
CL2001032612AA	other	0.01848	0.98152	other
CL2001032613AA	other	0.01723	0.98277	other
CL2001032614AA (testset)	other	0.01797	0.98203	other
CL2001032616AA	other	0.02527	0.97473	other
CL2001032617AA	other	0.03422	0.96578	other
CL2001032620AA	other	0.02324	0.97676	other
CL2001032625AA	other	0.02167	0.97833	other
CL2001032627AA	SQUAMOUS	0.97076	0.02924	SQUAMOUS
CL2001032628AA	other	0.02054	0.97946	other
CL2001032629AA (testset)	other	0.0242	0.9758	other
CL2001032630AA (testset)	other	0.01429	0.98571	other
CL2001032632AA	other	0.02993	0.97007	other
CL2001032638AA	other	0.0195	0.9805	other
CL2001032640AA	other	0.02354	0.97646	other
CL2001032643AA	other	0.04988	0.95012	other
CL2001032644AA (testset)	SQUAMOUS	0.96977	0.03023	SQUAMOUS
CL2001032647AA	other	0.01966	0.98034	other
CL2001032701AA	other	0.01945	0.98055	other
CL2001032702AA	other	0.16227	0.83773	other
CL2001032703AA	other	0.10849	0.89151	other
CL2001032704AA	other	0.13197	0.86803	other
CL2001032706AA	other	0.02413	0.97587	other
CL2001032709AA (testset)	other	0.01908	0.98092	other
CL2001032716AA	other	0.03947	0.96053	other
CL2001032717AA (testset)	other	0.01432	0.98568	other
CL2001032718AA	other	0.0302	0.9698	other
CL2001032719AA (testset)	SQUAMOUS	0.86315	0.13685	SQUAMOUS
CL2001032720AA	other	0.02239	0.97761	other
CL2001032722AA	other	0.01729	0.98271	other
CL2001032724AA	other	0.01996	0.98004	other
CL2001032725AA (testset)	other	0.02078	0.97922	other
CL2001032727AA	other	0.02054	0.97946	other
CL2001032729AA	other	0.02387	0.97613	other
CL2001032730AA	other	0.01454	0.98546	other
CL2001032732AA	SQUAMOUS	0.04159	0.95841	other
CL2001032733AA (testset)	other	0.01751	0.98249	other
CL2001032738AA	other	0.03309	0.96691	other
CL2001032742AA (testset)	other	0.34166	0.65834	other
CL2001032746AA (testset)	other	0.04715	0.95285	other
CL2001032747AA (testset)	other	0.02158	0.97842	other
CL2001032833AA (testset)	other	0.01591	0.98409	other
CL2001032836AA	other	0.29494	0.70506	other
CL2001032838AA	other	0.02326	0.97674	other
CL2001032839AA	other	0.02284	0.97716	other
CL2001032841AA	other	0.01478	0.98522	other
CL2001032842AA	other	0.02351	0.97649	other
CL2001032843AA	other	0.02365	0.97635	other
CL2001032845AA (testset)	other	0.01039	0.98961	other
CL2001032846AA (testset)	other	0.01745	0.98255	other
CL2001032847AA (testset)	other	0.0183	0.9817	other
CL2001032848AA	other	0.03463	0.96537	other
CL2001032850AA	other	0.01816	0.98184	other
CL2001032853AA	SQUAMOUS	0.94927	0.05073	SQUAMOUS
CL2001032854AA	other	0.02139	0.97861	other
CL2001032856AA	other	0.01603	0.98397	other
CL2001032857AA	other	0.01712	0.98288	other
CL2001032860AA	other	0.02002	0.97998	other
CL2001040305AA	other	0.01391	0.98609	other
CL2001040306AA	other	0.02718	0.97282	other
CL2001041708AA (testset)	other	0.02981	0.97019	other
CL2001041711AA	other	0.02124	0.97876	other
CL2001041716AA	other	0.02289	0.97711	other
CL2001042501AA	other	0.01675	0.98325	other
CL2001042505AA (testset)	other	0.01573	0.98427	other
CL2001042506AA	other	0.04065	0.95935	other