GO:0006457

GO:0006457

protein folding (annotated genes)

Biological Process

Parent node

GO:0019538	protein metabolism

This leaf node contains 94 genes

The following 17 of these are used in classification:

	Symbol	Genename	CARCINOID score	other score
355_s_at	FKBP1B	FK506 binding protein 1B, 12.6 kDa	1.4516	-0.1666
40421_at	PIN1	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	0.6622	-0.076
33667_at	PPIA	peptidylprolyl isomerase A (cyclophilin A)	-0.601	0.069
497_at	CLN3	ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	-0.5058	0.058
442_at	TRA1	tumor rejection antigen (gp96) 1	-0.438	0.0503
33409_at	FKBP2	FK506 binding protein 2, 13kDa	0.4025	-0.0462
40850_at	FKBP8	FK506 binding protein 8, 38kDa	0.3511	-0.0403
37422_at	PPIC	peptidylprolyl isomerase C (cyclophilin C)	-0.3133	0.0359
37720_at	HSPD1	heat shock 60kDa protein 1 (chaperonin)	-0.2732	0.0314
37044_at	PDIR	for protein disulfide isomerase-related	-0.2685	0.0308
40417_at	CCT5	chaperonin containing TCP1, subunit 5 (epsilon)	-0.2264	0.026
37365_at	DNAJB2	DnaJ (Hsp40) homolog, subfamily B, member 2	0.1838	-0.0211
34365_at	PPIE	peptidylprolyl isomerase E (cyclophilin E)	0.0796	-0.0091
40354_at	APG-1	heat shock protein (hsp110 family)	0.0775	-0.0089
38632_at	DNAJB5	DnaJ (Hsp40) homolog, subfamily B, member 5	0.0562	-0.0065
40053_at	TXNDC4	thioredoxin domain containing 4 (endoplasmic reticulum)	0.0408	-0.0047
33986_r_at	HSPCB	heat shock 90kDa protein 1, beta	0.018	-0.0021

Performance on training data

• Error rate: 0
• Performance: 0.04182
• Redundancy: 4.55154

	Sensitivity	Specificity
CARCINOID	1	1
other	1	1

Performance on test data

• Error rate: 0
• Performance: 0.05705
• Redundancy: 4.51095

	Sensitivity	Specificity
CARCINOID	1	1
other	1	1

Predictions

	Class	CARCINOID	other	Predictionn
CL2001031606AA (testset)	other	0.0034	0.9966	other
CL2001031607AA	other	0.02176	0.97824	other
CL2001031608AA	other	0.00714	0.99286	other
CL2001031609AA	CARCINOID	0.9835	0.0165	CARCINOID
CL2001031611AA	other	0.00578	0.99422	other
CL2001031612AA (testset)	other	0.00046	0.99954	other
CL2001031613AA	other	0.00747	0.99253	other
CL2001031615AA	other	0.00437	0.99563	other
CL2001031616AA	other	0.00131	0.99869	other
CL2001031618AA	other	0.01865	0.98135	other
CL2001031620AA (testset)	other	0.00102	0.99898	other
CL2001031621AA	other	0.00162	0.99838	other
CL2001031622AA (testset)	other	0.00378	0.99622	other
CL2001031625AA	other	0.00183	0.99817	other
CL2001031627AA	other	0.0116	0.9884	other
CL2001031628AA	other	0.00408	0.99592	other
CL2001031629AA	other	0.00113	0.99887	other
CL2001031630AA	other	0.02836	0.97164	other
CL2001031631AA	other	0.00103	0.99897	other
CL2001031632AA	other	0.00226	0.99774	other
CL2001031634AA	other	0.01824	0.98176	other
CL2001031635AA (testset)	other	0.00589	0.99411	other
CL2001031636AA (testset)	other	0.00054	0.99946	other
CL2001032002AA (testset)	other	0.0445	0.9555	other
CL2001032005AA (testset)	other	0.01041	0.98959	other
CL2001032008AA	other	0.00831	0.99169	other
CL2001032009AA (testset)	other	0.00215	0.99785	other
CL2001032010AA	other	0.09405	0.90595	other
CL2001032011AA	other	0.01923	0.98077	other
CL2001032012AA (testset)	other	0.01711	0.98289	other
CL2001032013AA (testset)	other	0.00923	0.99077	other
CL2001032015AA	other	0.02949	0.97051	other
CL2001032016AA	other	0.01373	0.98627	other
CL2001032019AA	other	0.00227	0.99773	other
CL2001032020AA (testset)	other	0.00188	0.99812	other
CL2001032025AA	other	0.00525	0.99475	other
CL2001032026AA	other	0.02761	0.97239	other
CL2001032027AA (testset)	other	0.0032	0.9968	other
CL2001032030AA	other	0.0016	0.9984	other
CL2001032031AA	other	0.00632	0.99368	other
CL2001032032AA (testset)	other	0.03748	0.96252	other
CL2001032034AA	other	0.0066	0.9934	other
CL2001032036AA	other	0.00019	0.99981	other
CL2001032041AA	other	0.02158	0.97842	other
CL2001032043AA	other	0.03638	0.96362	other
CL2001032044AA (testset)	CARCINOID	0.99137	0.00863	CARCINOID
CL2001032045AA	other	0.03957	0.96043	other
CL2001032046AA	other	0.04952	0.95048	other
CL2001032101AA	CARCINOID	0.96023	0.03977	CARCINOID
CL2001032102AA	other	0.05153	0.94847	other
CL2001032103AA	other	0.01909	0.98091	other
CL2001032104AA	other	0.01359	0.98641	other
CL2001032105AA (testset)	other	0.00157	0.99843	other
CL2001032107AA	other	0.00752	0.99248	other
CL2001032108AA	other	0.00771	0.99229	other
CL2001032109AA (testset)	other	0.01546	0.98454	other
CL2001032110AA (testset)	other	0.01937	0.98063	other
CL2001032111AA	other	0.01117	0.98883	other
CL2001032113AA	other	0.14914	0.85086	other
CL2001032114AA	other	0.00999	0.99001	other
CL2001032115AA	other	0.04185	0.95815	other
CL2001032116AA	other	0.00265	0.99735	other
CL2001032117AA (testset)	other	0.00072	0.99928	other
CL2001032121AA (testset)	other	0.0088	0.9912	other
CL2001032122AA	other	0.00153	0.99847	other
CL2001032124AA	CARCINOID	0.99518	0.00482	CARCINOID
CL2001032125AA	other	0.00291	0.99709	other
CL2001032127AA (testset)	CARCINOID	0.60643	0.39357	CARCINOID
CL2001032128AA	other	0.0439	0.9561	other
CL2001032129AA	other	0.00327	0.99673	other
CL2001032130AA (testset)	other	2e-04	0.9998	other
CL2001032132AA (testset)	other	0.00158	0.99842	other
CL2001032134AA	other	0.00197	0.99803	other
CL2001032135AA	other	0.00096	0.99904	other
CL2001032136AA	other	0.00281	0.99719	other
CL2001032138AA	other	0.01058	0.98942	other
CL2001032141AA	other	0.00102	0.99898	other
CL2001032142AA (testset)	other	0.02032	0.97968	other
CL2001032144AA	other	0.00158	0.99842	other
CL2001032145AA (testset)	CARCINOID	0.98287	0.01713	CARCINOID
CL2001032147AA	other	0.04205	0.95795	other
CL2001032149AA	other	0.00496	0.99504	other
CL2001032151AA	CARCINOID	0.95875	0.04125	CARCINOID
CL2001032152AA (testset)	CARCINOID	0.82322	0.17678	CARCINOID
CL2001032153AA	other	0.01528	0.98472	other
CL2001032155AA (testset)	other	0.00851	0.99149	other
CL2001032156AA	other	0.00298	0.99702	other
CL2001032202AA (testset)	other	0.04122	0.95878	other
CL2001032206AA	other	0.01638	0.98362	other
CL2001032207AA (testset)	other	0.00407	0.99593	other
CL2001032209AA (testset)	other	0.00033	0.99967	other
CL2001032210AA	CARCINOID	0.98925	0.01075	CARCINOID
CL2001032211AA	other	0.00147	0.99853	other
CL2001032212AA (testset)	other	0.00509	0.99491	other
CL2001032213AA (testset)	other	0.01474	0.98526	other
CL2001032214AA	other	0.0066	0.9934	other
CL2001032217AA (testset)	other	0.06685	0.93315	other
CL2001032218AA (testset)	other	0.00161	0.99839	other
CL2001032219AA (testset)	CARCINOID	0.92894	0.07106	CARCINOID
CL2001032220AA	other	0.0911	0.9089	other
CL2001032222AA (testset)	other	0.00703	0.99297	other
CL2001032229AA (testset)	other	0.01728	0.98272	other
CL2001032231AA	other	0.0127	0.9873	other
CL2001032232AA	other	0.00075	0.99925	other
CL2001032233AA	other	0.00314	0.99686	other
CL2001032238AA	CARCINOID	0.99677	0.00323	CARCINOID
CL2001032239AA	other	0.00102	0.99898	other
CL2001032240AA	other	0.00462	0.99538	other
CL2001032241AA (testset)	other	0.00215	0.99785	other
CL2001032242AA	other	0.00086	0.99914	other
CL2001032243AA (testset)	other	0.00583	0.99417	other
CL2001032248AA	other	0.00052	0.99948	other
CL2001032249AA	other	0.00157	0.99843	other
CL2001032252AA	other	0.00681	0.99319	other
CL2001032254AA (testset)	other	0.00667	0.99333	other
CL2001032255AA	other	0.00836	0.99164	other
CL2001032256AA (testset)	other	0.00447	0.99553	other
CL2001032259AA	other	0.00704	0.99296	other
CL2001032260AA	other	0.08406	0.91594	other
CL2001032301AA	other	0.00166	0.99834	other
CL2001032304AA (testset)	other	0.01118	0.98882	other
CL2001032305AA (testset)	other	0.00453	0.99547	other
CL2001032306AA	other	0.01027	0.98973	other
CL2001032307AA	other	0.00999	0.99001	other
CL2001032308AA	other	0.00485	0.99515	other
CL2001032309AA	other	0.00343	0.99657	other
CL2001032310AA	other	0.01218	0.98782	other
CL2001032311AA	other	0.00093	0.99907	other
CL2001032312AA	other	0.00385	0.99615	other
CL2001032313AA	other	0.00705	0.99295	other
CL2001032314AA	other	0.00273	0.99727	other
CL2001032316AA (testset)	other	0.00182	0.99818	other
CL2001032601AA	other	0.01002	0.98998	other
CL2001032602AA	other	0.01437	0.98563	other
CL2001032604AA	other	0.00076	0.99924	other
CL2001032607AA	CARCINOID	0.88578	0.11422	CARCINOID
CL2001032608AA	other	0.00687	0.99313	other
CL2001032610AA (testset)	other	0.00068	0.99932	other
CL2001032612AA	other	0.00698	0.99302	other
CL2001032613AA (testset)	other	0.00123	0.99877	other
CL2001032614AA (testset)	other	0.00774	0.99226	other
CL2001032616AA	other	0.02202	0.97798	other
CL2001032617AA (testset)	other	0.00638	0.99362	other
CL2001032620AA (testset)	other	0.00784	0.99216	other
CL2001032625AA	other	0.07857	0.92143	other
CL2001032627AA (testset)	other	0.00708	0.99292	other
CL2001032628AA	other	0.00209	0.99791	other
CL2001032629AA	CARCINOID	0.94913	0.05087	CARCINOID
CL2001032630AA	CARCINOID	0.99955	0.00045	CARCINOID
CL2001032632AA	other	0.06347	0.93653	other
CL2001032638AA (testset)	other	0.00204	0.99796	other
CL2001032640AA	other	0.00385	0.99615	other
CL2001032643AA	other	0.00195	0.99805	other
CL2001032644AA (testset)	other	0.00327	0.99673	other
CL2001032647AA	other	0.00366	0.99634	other
CL2001032701AA	other	0.0091	0.9909	other
CL2001032702AA (testset)	other	0.01595	0.98405	other
CL2001032703AA	other	0.02101	0.97899	other
CL2001032704AA (testset)	other	0.00237	0.99763	other
CL2001032706AA	other	0.00222	0.99778	other
CL2001032709AA	other	0.01726	0.98274	other
CL2001032716AA	other	0.00435	0.99565	other
CL2001032717AA (testset)	other	0.00505	0.99495	other
CL2001032718AA	other	0.05224	0.94776	other
CL2001032719AA (testset)	other	0.01897	0.98103	other
CL2001032720AA	other	0.0122	0.9878	other
CL2001032722AA	CARCINOID	0.9905	0.0095	CARCINOID
CL2001032724AA	other	0.01462	0.98538	other
CL2001032725AA (testset)	other	0.10035	0.89965	other
CL2001032727AA	other	0.04228	0.95772	other
CL2001032729AA (testset)	other	0.01173	0.98827	other
CL2001032730AA	other	0.00339	0.99661	other
CL2001032732AA (testset)	other	0.00815	0.99185	other
CL2001032733AA	other	0.0033	0.9967	other
CL2001032738AA	other	0.00193	0.99807	other
CL2001032742AA	other	0.00127	0.99873	other
CL2001032746AA	other	0.01818	0.98182	other
CL2001032747AA	other	0.00288	0.99712	other
CL2001032833AA	other	0.0049	0.9951	other
CL2001032836AA	other	0.00029	0.99971	other
CL2001032838AA	other	0.01509	0.98491	other
CL2001032839AA	other	0.0028	0.9972	other
CL2001032841AA	other	0.0258	0.9742	other
CL2001032842AA (testset)	other	0.14059	0.85941	other
CL2001032843AA (testset)	other	0.0047	0.9953	other
CL2001032845AA (testset)	other	0.00932	0.99068	other
CL2001032846AA	other	0.03588	0.96412	other
CL2001032847AA	CARCINOID	0.98279	0.01721	CARCINOID
CL2001032848AA (testset)	other	0.0255	0.9745	other
CL2001032850AA	CARCINOID	0.99839	0.00161	CARCINOID
CL2001032853AA (testset)	other	0.02959	0.97041	other
CL2001032854AA	CARCINOID	0.62948	0.37052	CARCINOID
CL2001032856AA	other	0.01012	0.98988	other
CL2001032857AA (testset)	other	0.00497	0.99503	other
CL2001032860AA	CARCINOID	0.79863	0.20137	CARCINOID
CL2001040305AA	other	4e-04	0.9996	other
CL2001040306AA	other	0.01137	0.98863	other
CL2001041708AA	other	0.00306	0.99694	other
CL2001041711AA (testset)	other	0.0121	0.9879	other
CL2001041716AA	other	0.00305	0.99695	other
CL2001042501AA (testset)	CARCINOID	0.87876	0.12124	CARCINOID
CL2001042505AA	other	0.00042	0.99958	other
CL2001042506AA	other	0.00296	0.99704	other