GO:0006954


GO:0006954

inflammatory response
(annotated genes)

Biological
Process

Parent node

This leaf node contains 155 genes

The following 49 of these are used in classification:

 SymbolGenenameT-ALL scoreother score
38242_atBLNK B-cell linker-1.63820.2514
649_s_atCXCR4 chemokine (C-X-C motif) receptor 4-0.98070.1505
39402_atIL1B interleukin 1, beta-0.77250.1185
1520_s_atIL1B interleukin 1, beta-0.75150.1153
38354_atCEBPB CCAAT/enhancer binding protein (C/EBP), beta0.6998-0.1074
36690_atNR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-0.63850.098
1102_s_atNR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-0.6050.0928
38271_atHDAC4 histone deacetylase 40.5948-0.0913
38810_atHDAC5 histone deacetylase 5-0.52350.0803
35869_atLY86 lymphocyte antigen 86-0.50390.0773
33641_g_atAIF1 allograft inflammatory factor 10.4915-0.0754
706_atNR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-0.46470.0713
41096_atS100A8 S100 calcium binding protein A8 (calgranulin A)0.4503-0.0691
2094_s_atFOS v-fos FBJ murine osteosarcoma viral oncogene homolog-0.3930.0603
36412_s_atIRF7 interferon regulatory factor 7-0.38560.0592
37647_atAOAH acyloxyacyl hydrolase (neutrophil)0.3821-0.0586
32114_s_atADORA2A adenosine A2a receptor0.3801-0.0583
41471_atS100A9 S100 calcium binding protein A9 (calgranulin B)0.3497-0.0537
1916_s_atFOS v-fos FBJ murine osteosarcoma viral oncogene homolog-0.32990.0506
1915_s_atFOS v-fos FBJ murine osteosarcoma viral oncogene homolog-0.32930.0505
40822_atNFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 30.2358-0.0362
40823_s_atNFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 30.2325-0.0357
39141_atABCF1 ATP-binding cassette, sub-family F (GCN20), member 10.218-0.0335
33965_atCCL1 chemokine (C-C motif) ligand 10.1947-0.0299
250_atNFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 30.1684-0.0258
36472_atNMI N-myc (and STAT) interactor0.156-0.0239
32718_atTPST1 tyrosylprotein sulfotransferase 1-0.15330.0235
39309_atBDKRB2 bradykinin receptor B20.1521-0.0233
1097_s_atCCR7 chemokine (C-C motif) receptor 7-0.13680.021
40310_atTLR2 toll-like receptor 2-0.12840.0197
35150_atTNFRSF5 tumor necrosis factor receptor superfamily, member 5-0.10330.0158
37599_atAOX1 aldehyde oxidase 1-0.08060.0124
39994_atCCR1 chemokine (C-C motif) receptor 1-0.07850.012
1183_atCCL17 chemokine (C-C motif) ligand 17-0.07370.0113
39624_atLTB4R leukotriene B4 receptor-0.07240.0111
35149_atTNFRSF5 tumor necrosis factor receptor superfamily, member 5-0.06990.0107
35779_atVPS45A vacuolar protein sorting 45A (yeast)0.0681-0.0104
33227_atIL10RB interleukin 10 receptor, beta0.0645-0.0099
36661_s_atCD14 CD14 antigen0.0631-0.0097
40091_atBCL6 B-cell CLL/lymphoma 6 (zinc finger protein 51)0.0491-0.0075
37303_atADPRTL1 ADP-ribosyltransferase (NAD+; poly (ADP-ribose) polymerase)-like 10.0395-0.0061
32666_atCXCL12 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)0.0325-0.005
1770_atIFNA2 interferon, alpha 20.0293-0.0045
37369_s_atNFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4-0.02680.0041
37968_atNCR3 natural cytotoxicity triggering receptor 30.025-0.0038
33956_atLY96 lymphocyte antigen 960.0139-0.0021
249_atNFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4-0.01320.002
39936_atCCR2 chemokine (C-C motif) receptor 20.0099-0.0015
37370_i_atNFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4-7e-041e-04

Performance on training data

 SensitivitySpecificity
T-ALL10.99471
other0.994711

Performance on test data

 SensitivitySpecificity
T-ALL10.96842
other0.968421

Predictions

 ClassT-ALLotherPredictionn
BCR-ABL-1other0.000150.99985 other
BCR-ABL-2other0.004080.99592 other
BCR-ABL-3 (testset)other0.000220.99978 other
BCR-ABL-4other2e-050.99998 other
BCR-ABL-5other0.012650.98735 other
BCR-ABL-6 (testset)other0.000840.99916 other
BCR-ABL-7 (testset)other0.025150.97485 other
BCR-ABL-8 (testset)other0.002180.99782 other
BCR-ABL-9 (testset)other7e-050.99993 other
BCR-ABL-C1 (testset)other0.000210.99979 other
BCR-ABL-Hyperdip-10 (testset)other01 other
BCR-ABL-Hyperdip-R5other01 other
BCR-ABL-R1other0.005530.99447 other
BCR-ABL-R2other0.003160.99684 other
BCR-ABL-R3 (testset)other0.011370.98863 other
E2A-PBX1-10other0.000290.99971 other
E2A-PBX1-11other0.001870.99813 other
E2A-PBX1-12 (testset)other0.000470.99953 other
E2A-PBX1-13other1e-050.99999 other
E2A-PBX1-1other1e-050.99999 other
E2A-PBX1-2other0.000340.99966 other
E2A-PBX1-3other0.000260.99974 other
E2A-PBX1-4 (testset)other0.000410.99959 other
E2A-PBX1-5other01 other
E2A-PBX1-6other1e-050.99999 other
E2A-PBX1-7other0.000640.99936 other
E2A-PBX1-8other0.000160.99984 other
E2A-PBX1-9other1e-050.99999 other
E2A-PBX1-2M1other0.001090.99891 other
E2A-PBX1-C10other5e-050.99995 other
E2A-PBX1-C11other0.000890.99911 other
E2A-PBX1-C12other6e-050.99994 other
E2A-PBX1-C1other0.009410.99059 other
E2A-PBX1-C2other0.000110.99989 other
E2A-PBX1-C3 (testset)other0.000790.99921 other
E2A-PBX1-C4other1e-050.99999 other
E2A-PBX1-C5 (testset)other0.003880.99612 other
E2A-PBX1-C6other2e-050.99998 other
E2A-PBX1-C7other0.000370.99963 other
E2A-PBX1-C8other0.255780.74422 other
E2A-PBX1-C9other0.000160.99984 other
E2A-PBX1-R1other01 other
Hyperdip-50-10other01 other
Hyperdip-50-11 (testset)other1e-050.99999 other
Hyperdip-50-12other0.000340.99966 other
Hyperdip-50-13 (testset)other01 other
Hyperdip-50-14other01 other
Hyperdip-50-1other5e-050.99995 other
Hyperdip-50-2other01 other
Hyperdip-50-3 (testset)other01 other
Hyperdip-50-4 (testset)other2e-050.99998 other
Hyperdip-50-5 (testset)other01 other
Hyperdip-50-6other01 other
Hyperdip-50-7other3e-050.99997 other
Hyperdip-50-8 (testset)other1e-050.99999 other
Hyperdip-50-9other01 other
Hyperdip-50-2M1other2e-050.99998 other
Hyperdip-50-2M2 (testset)other0.000850.99915 other
Hyperdip-50-C10other0.000120.99988 other
Hyperdip-50-C11 (testset)other2e-050.99998 other
Hyperdip-50-C12other0.004060.99594 other
Hyperdip-50-C13other01 other
Hyperdip-50-C14other1e-050.99999 other
Hyperdip-50-C15other0.000210.99979 other
Hyperdip-50-C16other1e-050.99999 other
Hyperdip-50-C17other01 other
Hyperdip-50-C18other01 other
Hyperdip-50-C19 (testset)other01 other
Hyperdip-50-C1other2e-050.99998 other
Hyperdip-50-C20other01 other
Hyperdip-50-C21other01 other
Hyperdip-50-C22 (testset)other01 other
Hyperdip-50-C23other01 other
Hyperdip-50-C24other0.000180.99982 other
Hyperdip-50-C25other01 other
Hyperdip-50-C26other1e-050.99999 other
Hyperdip-50-C27-Nother0.00320.9968 other
Hyperdip-50-C28other1e-050.99999 other
Hyperdip-50-C29 (testset)other0.008310.99169 other
Hyperdip-50-C2 (testset)other0.000120.99988 other
Hyperdip-50-C30other01 other
Hyperdip-50-C31other01 other
Hyperdip-50-C32other01 other
Hyperdip-50-C33other0.000190.99981 other
Hyperdip-50-C34other1e-050.99999 other
Hyperdip-50-C35 (testset)other4e-050.99996 other
Hyperdip-50-C36other01 other
Hyperdip-50-C37other0.000190.99981 other
Hyperdip-50-C38other01 other
Hyperdip-50-C39 (testset)other3e-050.99997 other
Hyperdip-50-C3other0.000290.99971 other
Hyperdip-50-C40other9e-050.99991 other
Hyperdip-50-C41 (testset)other01 other
Hyperdip-50-C42 (testset)other01 other
Hyperdip-50-C43other9e-050.99991 other
Hyperdip-50-C4other01 other
Hyperdip-50-C5 (testset)other1e-040.9999 other
Hyperdip-50-C6other1e-050.99999 other
Hyperdip-50-C7 (testset)other1e-050.99999 other
Hyperdip-50-C8 (testset)other3e-050.99997 other
Hyperdip-50-C9other01 other
Hyperdip-50-R1other0.000320.99968 other
Hyperdip-50-R2 (testset)other8e-050.99992 other
Hyperdip-50-R3other0.932080.06792 T-ALL
Hyperdip-50-R4other1e-050.99999 other
Hyperdip-50-R5 (testset)other1e-050.99999 other
Hyperdip47-50-1other1e-050.99999 other
Hyperdip47-50-2other6e-050.99994 other
Hyperdip47-50-3 (testset)other6e-040.9994 other
Hyperdip47-50-2M1 (testset)other01 other
Hyperdip47-50-C10 (testset)other3e-050.99997 other
Hyperdip47-50-C11other0.070.93 other
Hyperdip47-50-C12other01 other
Hyperdip47-50-C13other01 other
Hyperdip47-50-C14-N (testset)other01 other
Hyperdip47-50-C15 (testset)other01 other
Hyperdip47-50-C16other0.000120.99988 other
Hyperdip47-50-C17other0.000250.99975 other
Hyperdip47-50-C18other01 other
Hyperdip47-50-C19other0.013680.98632 other
Hyperdip47-50-C1 (testset)other0.002430.99757 other
Hyperdip47-50-C2 (testset)other6e-040.9994 other
Hyperdip47-50-C3-N (testset)other01 other
Hyperdip47-50-C4other9e-050.99991 other
Hyperdip47-50-C5 (testset)other0.000310.99969 other
Hyperdip47-50-C6 (testset)other01 other
Hyperdip47-50-C7other0.211670.78833 other
Hyperdip47-50-C8other0.000820.99918 other
Hyperdip47-50-C9other01 other
Hypodip-1 (testset)other0.001990.99801 other
Hypodip-2other0.001620.99838 other
Hypodip-2M1 (testset)other0.007290.99271 other
Hypodip-C1other01 other
Hypodip-C2 (testset)other0.017490.98251 other
Hypodip-C3other0.000450.99955 other
Hypodip-C4other0.000270.99973 other
Hypodip-C5other4e-050.99996 other
Hypodip-C6 (testset)other01 other
MLL-1 (testset)other01 other
MLL-2other0.005470.99453 other
MLL-3 (testset)other01 other
MLL-4other01 other
MLL-5 (testset)other0.000160.99984 other
MLL-6 (testset)other0.000190.99981 other
MLL-7other0.000240.99976 other
MLL-8 (testset)other0.000410.99959 other
MLL-2M1other0.123860.87614 other
MLL-2M2 (testset)other0.000210.99979 other
MLL-C1other01 other
MLL-C2other0.004040.99596 other
MLL-C3 (testset)other0.000660.99934 other
MLL-C4other0.072320.92768 other
MLL-C5other0.013510.98649 other
MLL-C6other0.01010.9899 other
MLL-R1 (testset)other0.61820.3818 T-ALL
MLL-R2other0.002790.99721 other
MLL-R3other0.000590.99941 other
MLL-R4other0.000770.99923 other
Normal-1other3e-050.99997 other
Normal-2other5e-050.99995 other
Normal-3other1e-050.99999 other
Normal-C1-Nother0.001480.99852 other
Normal-C10other0.004490.99551 other
Normal-C11-N (testset)other0.000640.99936 other
Normal-C12 (testset)other0.564860.43514 T-ALL
Normal-C2-Nother0.000480.99952 other
Normal-C3-Nother0.010540.98946 other
Normal-C4-Nother01 other
Normal-C5other01 other
Normal-C6 (testset)other0.000430.99957 other
Normal-C7-N (testset)other0.001130.99887 other
Normal-C8other6e-050.99994 other
Normal-C9 (testset)other01 other
Normal-R1 (testset)other4e-050.99996 other
Normal-R2-Nother4e-050.99996 other
Normal-R3other0.002930.99707 other
Pseudodip-1other0.000180.99982 other
Pseudodip-2other5e-050.99995 other
Pseudodip-3other0.000190.99981 other
Pseudodip-4 (testset)other2e-050.99998 other
Pseudodip-5 (testset)other4e-050.99996 other
Pseudodip-6 (testset)other01 other
Pseudodip-7other2e-050.99998 other
Pseudodip-8-Nother01 other
Pseudodip-9other0.000210.99979 other
Pseudodip-C10 (testset)other0.000140.99986 other
Pseudodip-C11 (testset)other7e-050.99993 other
Pseudodip-C12 (testset)other0.001160.99884 other
Pseudodip-C13other1e-050.99999 other
Pseudodip-C14 (testset)other0.000990.99901 other
Pseudodip-C15other0.054830.94517 other
Pseudodip-C16-N (testset)other0.029070.97093 other
Pseudodip-C17other0.000120.99988 other
Pseudodip-C18other0.031950.96805 other
Pseudodip-C19other0.000120.99988 other
Pseudodip-C1other0.000180.99982 other
Pseudodip-C2-Nother0.037830.96217 other
Pseudodip-C3other0.000530.99947 other
Pseudodip-C4other0.212720.78728 other
Pseudodip-C5 (testset)other0.001410.99859 other
Pseudodip-C6other0.017410.98259 other
Pseudodip-C7other01 other
Pseudodip-C8other0.07870.9213 other
Pseudodip-C9other4e-050.99996 other
Pseudodip-R1-N (testset)other0.000670.99933 other
T-ALL-10 (testset)T-ALL0.999540.00046 T-ALL
T-ALL-1 (testset)T-ALL0.990830.00917 T-ALL
T-ALL-2 (testset)T-ALL0.99440.0056 T-ALL
T-ALL-3T-ALL10 T-ALL
T-ALL-4 (testset)T-ALL0.999928e-05 T-ALL
T-ALL-5 (testset)T-ALL0.999440.00056 T-ALL
T-ALL-6T-ALL0.999740.00026 T-ALL
T-ALL-7 (testset)T-ALL0.998590.00141 T-ALL
T-ALL-8 (testset)T-ALL0.999530.00047 T-ALL
T-ALL-9T-ALL0.99955e-04 T-ALL
T-ALL-2M1T-ALL0.999850.00015 T-ALL
T-ALL-C10T-ALL0.999520.00048 T-ALL
T-ALL-C11T-ALL0.99860.0014 T-ALL
T-ALL-C12T-ALL0.999560.00044 T-ALL
T-ALL-C13T-ALL0.998330.00167 T-ALL
T-ALL-C14T-ALL0.990490.00951 T-ALL
T-ALL-C15 (testset)T-ALL0.999955e-05 T-ALL
T-ALL-C16 (testset)T-ALL0.94830.0517 T-ALL
T-ALL-C17T-ALL0.932980.06702 T-ALL
T-ALL-C18T-ALL0.999850.00015 T-ALL
T-ALL-C19T-ALL0.996870.00313 T-ALL
T-ALL-C1T-ALL0.997450.00255 T-ALL
T-ALL-C20T-ALL0.999650.00035 T-ALL
T-ALL-C21T-ALL0.997770.00223 T-ALL
T-ALL-C22 (testset)T-ALL0.994030.00597 T-ALL
T-ALL-C23T-ALL0.970310.02969 T-ALL
T-ALL-C24 (testset)T-ALL0.99982e-04 T-ALL
T-ALL-C25 (testset)T-ALL0.980860.01914 T-ALL
T-ALL-C26T-ALL0.998830.00117 T-ALL
T-ALL-C2T-ALL0.999630.00037 T-ALL
T-ALL-C3T-ALL0.999690.00031 T-ALL
T-ALL-C4T-ALL0.99590.0041 T-ALL
T-ALL-C5 (testset)T-ALL0.89520.1048 T-ALL
T-ALL-C6T-ALL0.984210.01579 T-ALL
T-ALL-C7 (testset)T-ALL0.952960.04704 T-ALL
T-ALL-C8T-ALL0.998890.00111 T-ALL
T-ALL-C9T-ALL0.999964e-05 T-ALL
T-ALL-R1T-ALL0.999240.00076 T-ALL
T-ALL-R2T-ALL0.995450.00455 T-ALL
T-ALL-R3T-ALL0.999820.00018 T-ALL
T-ALL-R4T-ALL0.999973e-05 T-ALL
T-ALL-R5T-ALL0.998850.00115 T-ALL
T-ALL-R6T-ALL0.999570.00043 T-ALL
TEL-AML1-10other0.008550.99145 other
TEL-AML1-11 (testset)other0.010590.98941 other
TEL-AML1-12other0.028520.97148 other
TEL-AML1-13 (testset)other0.002540.99746 other
TEL-AML1-14other0.018850.98115 other
TEL-AML1-1other0.151660.84834 other
TEL-AML1-2other0.014520.98548 other
TEL-AML1-3other6e-050.99994 other
TEL-AML1-4other0.007190.99281 other
TEL-AML1-5 (testset)other0.014420.98558 other
TEL-AML1-6other0.150260.84974 other
TEL-AML1-7other8e-050.99992 other
TEL-AML1-8 (testset)other0.002180.99782 other
TEL-AML1-9other0.00250.9975 other
TEL-AML1-2M1 (testset)other0.000110.99989 other
TEL-AML1-2M2other0.28730.7127 other
TEL-AML1-2M3other0.103010.89699 other
TEL-AML1-2M4 (testset)other0.004360.99564 other
TEL-AML1-2M5other0.075980.92402 other
TEL-AML1-C10other0.002560.99744 other
TEL-AML1-C11other0.039310.96069 other
TEL-AML1-C12other0.000620.99938 other
TEL-AML1-C13other0.000720.99928 other
TEL-AML1-C14 (testset)other0.003250.99675 other
TEL-AML1-C15other5e-050.99995 other
TEL-AML1-C16other9e-050.99991 other
TEL-AML1-C17other0.12420.8758 other
TEL-AML1-C18other0.012920.98708 other
TEL-AML1-C19 (testset)other0.011260.98874 other
TEL-AML1-C1 (testset)other0.026990.97301 other
TEL-AML1-C20 (testset)other0.001780.99822 other
TEL-AML1-C21other0.088030.91197 other
TEL-AML1-C22other0.003190.99681 other
TEL-AML1-C23 (testset)other0.83370.1663 T-ALL
TEL-AML1-C24other0.002410.99759 other
TEL-AML1-C25other0.000380.99962 other
TEL-AML1-C26 (testset)other0.000580.99942 other
TEL-AML1-C27other0.012390.98761 other
TEL-AML1-C28 (testset)other3e-050.99997 other
TEL-AML1-C29other0.000220.99978 other
TEL-AML1-C2other0.003920.99608 other
TEL-AML1-C30other0.001720.99828 other
TEL-AML1-C31 (testset)other0.000130.99987 other
TEL-AML1-C32other01 other
TEL-AML1-C33 (testset)other0.000270.99973 other
TEL-AML1-C34other0.001890.99811 other
TEL-AML1-C35other0.004740.99526 other
TEL-AML1-C36 (testset)other0.005010.99499 other
TEL-AML1-C37other5e-050.99995 other
TEL-AML1-C38other0.000350.99965 other
TEL-AML1-C39other0.011810.98819 other
TEL-AML1-C3other0.012830.98717 other
TEL-AML1-C40other0.036290.96371 other
TEL-AML1-C41other0.033640.96636 other
TEL-AML1-C42other0.047710.95229 other
TEL-AML1-C43other0.009260.99074 other
TEL-AML1-C44other0.003820.99618 other
TEL-AML1-C45other0.213890.78611 other
TEL-AML1-C46other0.000340.99966 other
TEL-AML1-C47other0.000780.99922 other
TEL-AML1-C48other0.0010.999 other
TEL-AML1-C49 (testset)other0.009930.99007 other
TEL-AML1-C4 (testset)other0.000160.99984 other
TEL-AML1-C50other0.151990.84801 other
TEL-AML1-C51 (testset)other0.000230.99977 other
TEL-AML1-C52other0.0030.997 other
TEL-AML1-C53 (testset)other0.030270.96973 other
TEL-AML1-C54other0.000380.99962 other
TEL-AML1-C55 (testset)other0.032570.96743 other
TEL-AML1-C56other0.017770.98223 other
TEL-AML1-C57other0.000210.99979 other
TEL-AML1-C5 (testset)other4e-050.99996 other
TEL-AML1-C6other0.000520.99948 other
TEL-AML1-C7other0.003710.99629 other
TEL-AML1-C8other0.378750.62125 other
TEL-AML1-C9other0.113940.88606 other
TEL-AML1-R1 (testset)other0.015080.98492 other
TEL-AML1-R2 (testset)other0.003980.99602 other
TEL-AML1-R3other0.016780.98322 other

 


Generated by StAM on Tue Sep 7 18:29:38 2004