GO:0000004


GO:0000004

biological_process unknown
(annotated genes)

Biological
Process

Parent node

This leaf node contains 525 genes

The following 52 of these are used in classification:

 SymbolGenenameT-ALL scoreother score
39709_atSEPW1 selenoprotein W, 11.5224-0.2336
34780_atPLXNB2 plexin B2-0.65210.1001
37849_atSLIT1 slit homolog 1 (Drosophila)0.5705-0.0875
38729_atFKBP4 FK506 binding protein 4, 59kDa0.516-0.0792
35764_atOFD1 oral-facial-digital syndrome 1-0.49430.0758
33264_atHSRTSBETA rTS beta protein0.4632-0.0711
32716_atDGKA diacylglycerol kinase, alpha 80kDa0.4583-0.0703
41047_atC9orf16 chromosome 9 open reading frame 160.4092-0.0628
41233_atDNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 60.3976-0.061
35341_atTRIM38 tripartite motif-containing 38-0.38470.059
36968_s_atOIP2 Opa-interacting protein 20.3523-0.0541
37600_atECM1 extracellular matrix protein 1-0.35030.0537
35648_atAUTS2 autism susceptibility candidate 2-0.34310.0526
32602_atRAP1GDS1 RAP1, GTP-GDP dissociation stimulator 10.2967-0.0455
33641_g_atAIF1 allograft inflammatory factor 10.2873-0.0441
39345_atNPC2 Niemann-Pick disease, type C2-0.27760.0426
1252_atDP1 polyposis locus protein 1-0.26060.04
33263_atHSRTSBETA rTS beta protein0.2454-0.0377
31526_f_atUSP6 ubiquitin specific protease 6 (Tre-2 oncogene)0.2267-0.0348
824_atGSTO1 glutathione S-transferase omega 10.2197-0.0337
946_atTCTEL1 t-complex-associated-testis-expressed 1-like 1-0.21290.0327
34845_atCGI-51 CGI-51 protein0.2064-0.0317
40891_f_atDXS9879E DNA segment on chromosome X (unique) 9879 expressed sequence0.1897-0.0291
36948_atCRI1 CREBBP/EP300 inhibitory protein 10.1889-0.029
37348_s_atHMGN3 high mobility group nucleosomal binding domain 30.1856-0.0285
36491_atTMSNB thymosin, beta, identified in neuroblastoma cells0.1803-0.0277
1624_atRAP1GDS1 RAP1, GTP-GDP dissociation stimulator 10.1742-0.0267
35883_atSPIB Spi-B transcription factor (Spi-1/PU.1 related)-0.17240.0265
38759_atBTN3A2 butyrophilin, subfamily 3, member A20.1642-0.0252
41819_atFYB FYN binding protein (FYB-120/130)0.1557-0.0239
38744_atSHFM1 split hand/foot malformation (ectrodactyly) type 10.1457-0.0224
36013_atSLC30A9 solute carrier family 30 (zinc transporter), member 90.1438-0.0221
333_s_atRBMS1 RNA binding motif, single stranded interacting protein 10.1434-0.022
37023_atLCP1 lymphocyte cytosolic protein 1 (L-plastin)0.1381-0.0212
39685_atE46L like mouse brain protein E460.1285-0.0197
39081_atMT1E metallothionein 1E (functional)0.1256-0.0193
41759_atSKP1A S-phase kinase-associated protein 1A (p19A)0.1139-0.0175
32316_s_atHSPCA heat shock 90kDa protein 1, alpha0.1031-0.0158
40426_atBCL7B B-cell CLL/lymphoma 7B0.0979-0.015
181_g_atLENG4 leukocyte receptor cluster (LRC) member 40.0971-0.0149
32253_atRERE arginine-glutamic acid dipeptide (RE) repeats-0.08040.0123
37583_atJARID1D Jumonji, AT rich interactive domain 1D (RBP2-like)0.0665-0.0102
39686_g_atE46L like mouse brain protein E460.0616-0.0095
37178_atLOC91137 hypothetical protein BC0171690.0588-0.009
31600_s_atPMS2L1 postmeiotic segregation increased 2-like 10.0501-0.0077
37100_atFMNL1 formin-like 10.046-0.0071
33373_atNEXN nexilin (F actin binding protein)0.0398-0.0061
33867_s_atRBMS1 RNA binding motif, single stranded interacting protein 10.0361-0.0055
40758_atICT1 immature colon carcinoma transcript 10.0345-0.0053
38364_atTLE4 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)-0.02990.0046
41446_f_atMT1F metallothionein 1F (functional)0.0274-0.0042
31832_atKIAA0286 KIAA0286 protein0.0226-0.0035

Performance on training data

 SensitivitySpecificity
T-ALL0.896551
other10.89655

Performance on test data

 SensitivitySpecificity
T-ALL0.857141
other10.85714

Predictions

 ClassT-ALLotherPredictionn
BCR-ABL-1other0.036780.96322 other
BCR-ABL-2other0.000110.99989 other
BCR-ABL-3 (testset)other0.001070.99893 other
BCR-ABL-4other0.000580.99942 other
BCR-ABL-5other0.004540.99546 other
BCR-ABL-6 (testset)other0.00730.9927 other
BCR-ABL-7 (testset)other0.002240.99776 other
BCR-ABL-8 (testset)other0.000570.99943 other
BCR-ABL-9 (testset)other0.00220.9978 other
BCR-ABL-C1 (testset)other0.000340.99966 other
BCR-ABL-Hyperdip-10 (testset)other0.005450.99455 other
BCR-ABL-Hyperdip-R5other0.002370.99763 other
BCR-ABL-R1other0.004630.99537 other
BCR-ABL-R2other0.082140.91786 other
BCR-ABL-R3 (testset)other0.000950.99905 other
E2A-PBX1-10other0.000220.99978 other
E2A-PBX1-11other0.000190.99981 other
E2A-PBX1-12 (testset)other0.000280.99972 other
E2A-PBX1-13other0.000580.99942 other
E2A-PBX1-1other0.000460.99954 other
E2A-PBX1-2other0.000210.99979 other
E2A-PBX1-3other0.000180.99982 other
E2A-PBX1-4 (testset)other4e-050.99996 other
E2A-PBX1-5other0.001260.99874 other
E2A-PBX1-6other0.000250.99975 other
E2A-PBX1-7other8e-050.99992 other
E2A-PBX1-8other0.000110.99989 other
E2A-PBX1-9other0.001360.99864 other
E2A-PBX1-2M1other0.000790.99921 other
E2A-PBX1-C10other0.000830.99917 other
E2A-PBX1-C11other6e-040.9994 other
E2A-PBX1-C12other0.000530.99947 other
E2A-PBX1-C1other0.000150.99985 other
E2A-PBX1-C2other5e-040.9995 other
E2A-PBX1-C3 (testset)other0.000180.99982 other
E2A-PBX1-C4other0.000260.99974 other
E2A-PBX1-C5 (testset)other4e-050.99996 other
E2A-PBX1-C6other2e-050.99998 other
E2A-PBX1-C7other0.000940.99906 other
E2A-PBX1-C8other0.027420.97258 other
E2A-PBX1-C9other1e-040.9999 other
E2A-PBX1-R1other5e-040.9995 other
Hyperdip-50-10other0.001470.99853 other
Hyperdip-50-11 (testset)other0.00110.9989 other
Hyperdip-50-12other0.000370.99963 other
Hyperdip-50-13 (testset)other0.003920.99608 other
Hyperdip-50-14other0.003590.99641 other
Hyperdip-50-1other0.000250.99975 other
Hyperdip-50-2other0.016980.98302 other
Hyperdip-50-3 (testset)other0.000150.99985 other
Hyperdip-50-4 (testset)other0.028190.97181 other
Hyperdip-50-5 (testset)other0.001060.99894 other
Hyperdip-50-6other0.000920.99908 other
Hyperdip-50-7other0.000110.99989 other
Hyperdip-50-8 (testset)other0.000740.99926 other
Hyperdip-50-9other3e-050.99997 other
Hyperdip-50-2M1other0.001330.99867 other
Hyperdip-50-2M2 (testset)other0.000180.99982 other
Hyperdip-50-C10other7e-050.99993 other
Hyperdip-50-C11 (testset)other0.001090.99891 other
Hyperdip-50-C12other5e-050.99995 other
Hyperdip-50-C13other0.002420.99758 other
Hyperdip-50-C14other0.000510.99949 other
Hyperdip-50-C15other0.000180.99982 other
Hyperdip-50-C16other0.000250.99975 other
Hyperdip-50-C17other0.021680.97832 other
Hyperdip-50-C18other0.017920.98208 other
Hyperdip-50-C19 (testset)other9e-050.99991 other
Hyperdip-50-C1other0.000240.99976 other
Hyperdip-50-C20other0.003340.99666 other
Hyperdip-50-C21other0.057130.94287 other
Hyperdip-50-C22 (testset)other0.002240.99776 other
Hyperdip-50-C23other0.001010.99899 other
Hyperdip-50-C24other0.000150.99985 other
Hyperdip-50-C25other0.013220.98678 other
Hyperdip-50-C26other0.000480.99952 other
Hyperdip-50-C27-Nother0.000810.99919 other
Hyperdip-50-C28other7e-050.99993 other
Hyperdip-50-C29 (testset)other7e-040.9993 other
Hyperdip-50-C2 (testset)other0.000870.99913 other
Hyperdip-50-C30other0.000650.99935 other
Hyperdip-50-C31other7e-050.99993 other
Hyperdip-50-C32other0.001810.99819 other
Hyperdip-50-C33other3e-050.99997 other
Hyperdip-50-C34other0.000210.99979 other
Hyperdip-50-C35 (testset)other0.000250.99975 other
Hyperdip-50-C36other0.005050.99495 other
Hyperdip-50-C37other0.000720.99928 other
Hyperdip-50-C38other0.020910.97909 other
Hyperdip-50-C39 (testset)other0.001810.99819 other
Hyperdip-50-C3other0.000190.99981 other
Hyperdip-50-C40other0.000180.99982 other
Hyperdip-50-C41 (testset)other0.05960.9404 other
Hyperdip-50-C42 (testset)other0.01580.9842 other
Hyperdip-50-C43other9e-050.99991 other
Hyperdip-50-C4other0.000210.99979 other
Hyperdip-50-C5 (testset)other0.002170.99783 other
Hyperdip-50-C6other0.001050.99895 other
Hyperdip-50-C7 (testset)other0.000110.99989 other
Hyperdip-50-C8 (testset)other0.000230.99977 other
Hyperdip-50-C9other0.001510.99849 other
Hyperdip-50-R1other0.002340.99766 other
Hyperdip-50-R2 (testset)other0.000460.99954 other
Hyperdip-50-R3other5e-050.99995 other
Hyperdip-50-R4other8e-040.9992 other
Hyperdip-50-R5 (testset)other0.000240.99976 other
Hyperdip47-50-1other0.001290.99871 other
Hyperdip47-50-2other0.00290.9971 other
Hyperdip47-50-3 (testset)other0.011950.98805 other
Hyperdip47-50-2M1 (testset)other0.000160.99984 other
Hyperdip47-50-C10 (testset)other0.000340.99966 other
Hyperdip47-50-C11other0.000110.99989 other
Hyperdip47-50-C12other0.112890.88711 other
Hyperdip47-50-C13other0.057020.94298 other
Hyperdip47-50-C14-N (testset)other0.040740.95926 other
Hyperdip47-50-C15 (testset)other0.000570.99943 other
Hyperdip47-50-C16other3e-040.9997 other
Hyperdip47-50-C17other0.002190.99781 other
Hyperdip47-50-C18other0.000820.99918 other
Hyperdip47-50-C19other0.001760.99824 other
Hyperdip47-50-C1 (testset)other0.001660.99834 other
Hyperdip47-50-C2 (testset)other0.005160.99484 other
Hyperdip47-50-C3-N (testset)other0.0030.997 other
Hyperdip47-50-C4other0.000110.99989 other
Hyperdip47-50-C5 (testset)other0.010240.98976 other
Hyperdip47-50-C6 (testset)other0.018050.98195 other
Hyperdip47-50-C7other2e-050.99998 other
Hyperdip47-50-C8other0.004870.99513 other
Hyperdip47-50-C9other5e-050.99995 other
Hypodip-1 (testset)other0.000440.99956 other
Hypodip-2other0.005510.99449 other
Hypodip-2M1 (testset)other0.000130.99987 other
Hypodip-C1other0.011060.98894 other
Hypodip-C2 (testset)other0.000880.99912 other
Hypodip-C3other0.000370.99963 other
Hypodip-C4other1e-050.99999 other
Hypodip-C5other0.004640.99536 other
Hypodip-C6 (testset)other0.000570.99943 other
MLL-1 (testset)other2e-040.9998 other
MLL-2other0.000310.99969 other
MLL-3 (testset)other0.017740.98226 other
MLL-4other0.003180.99682 other
MLL-5 (testset)other0.000570.99943 other
MLL-6 (testset)other0.001880.99812 other
MLL-7other0.000390.99961 other
MLL-8 (testset)other0.000780.99922 other
MLL-2M1other0.000640.99936 other
MLL-2M2 (testset)other0.000750.99925 other
MLL-C1other0.002590.99741 other
MLL-C2other0.019920.98008 other
MLL-C3 (testset)other0.016830.98317 other
MLL-C4other0.000780.99922 other
MLL-C5other0.014880.98512 other
MLL-C6other0.006890.99311 other
MLL-R1 (testset)other0.000140.99986 other
MLL-R2other0.000280.99972 other
MLL-R3other0.003730.99627 other
MLL-R4other0.000310.99969 other
Normal-1other1e-050.99999 other
Normal-2other0.002340.99766 other
Normal-3other0.000230.99977 other
Normal-C1-Nother0.000260.99974 other
Normal-C10other0.000120.99988 other
Normal-C11-N (testset)other0.000450.99955 other
Normal-C12 (testset)other2e-050.99998 other
Normal-C2-Nother0.003980.99602 other
Normal-C3-Nother0.000210.99979 other
Normal-C4-Nother0.038120.96188 other
Normal-C5other0.000170.99983 other
Normal-C6 (testset)other7e-050.99993 other
Normal-C7-N (testset)other0.000110.99989 other
Normal-C8other0.003920.99608 other
Normal-C9 (testset)other0.000240.99976 other
Normal-R1 (testset)other1e-040.9999 other
Normal-R2-Nother0.003690.99631 other
Normal-R3other0.003140.99686 other
Pseudodip-1other8e-050.99992 other
Pseudodip-2other0.035480.96452 other
Pseudodip-3other0.000340.99966 other
Pseudodip-4 (testset)other0.000160.99984 other
Pseudodip-5 (testset)other0.000260.99974 other
Pseudodip-6 (testset)other0.000670.99933 other
Pseudodip-7other0.011260.98874 other
Pseudodip-8-Nother0.022640.97736 other
Pseudodip-9other0.000720.99928 other
Pseudodip-C10 (testset)other0.032660.96734 other
Pseudodip-C11 (testset)other0.000420.99958 other
Pseudodip-C12 (testset)other0.000860.99914 other
Pseudodip-C13other0.003320.99668 other
Pseudodip-C14 (testset)other0.004490.99551 other
Pseudodip-C15other2e-050.99998 other
Pseudodip-C16-N (testset)other0.002250.99775 other
Pseudodip-C17other0.000130.99987 other
Pseudodip-C18other9e-050.99991 other
Pseudodip-C19other0.004510.99549 other
Pseudodip-C1other0.000490.99951 other
Pseudodip-C2-Nother0.000530.99947 other
Pseudodip-C3other0.001540.99846 other
Pseudodip-C4other8e-050.99992 other
Pseudodip-C5 (testset)other5e-050.99995 other
Pseudodip-C6other0.000340.99966 other
Pseudodip-C7other4e-040.9996 other
Pseudodip-C8other0.000110.99989 other
Pseudodip-C9other0.000120.99988 other
Pseudodip-R1-N (testset)other7e-040.9993 other
T-ALL-10 (testset)T-ALL0.976250.02375 T-ALL
T-ALL-1 (testset)T-ALL10 T-ALL
T-ALL-2 (testset)T-ALL0.001270.99873 other
T-ALL-3T-ALL0.999982e-05 T-ALL
T-ALL-4 (testset)T-ALL0.999710.00029 T-ALL
T-ALL-5 (testset)T-ALL10 T-ALL
T-ALL-6T-ALL10 T-ALL
T-ALL-7 (testset)T-ALL0.999991e-05 T-ALL
T-ALL-8 (testset)T-ALL0.99991e-04 T-ALL
T-ALL-9T-ALL0.999190.00081 T-ALL
T-ALL-2M1T-ALL0.999955e-05 T-ALL
T-ALL-C10T-ALL10 T-ALL
T-ALL-C11T-ALL10 T-ALL
T-ALL-C12T-ALL10 T-ALL
T-ALL-C13T-ALL0.999090.00091 T-ALL
T-ALL-C14T-ALL0.012830.98717 other
T-ALL-C15 (testset)T-ALL0.999991e-05 T-ALL
T-ALL-C16 (testset)T-ALL0.164150.83585 other
T-ALL-C17T-ALL0.485820.51418 other
T-ALL-C18T-ALL0.948040.05196 T-ALL
T-ALL-C19T-ALL0.999750.00025 T-ALL
T-ALL-C1T-ALL0.506190.49381 T-ALL
T-ALL-C20T-ALL10 T-ALL
T-ALL-C21T-ALL0.999740.00026 T-ALL
T-ALL-C22 (testset)T-ALL0.999890.00011 T-ALL
T-ALL-C23T-ALL0.869420.13058 T-ALL
T-ALL-C24 (testset)T-ALL0.948410.05159 T-ALL
T-ALL-C25 (testset)T-ALL10 T-ALL
T-ALL-C26T-ALL0.968450.03155 T-ALL
T-ALL-C2T-ALL0.998090.00191 T-ALL
T-ALL-C3T-ALL0.999919e-05 T-ALL
T-ALL-C4T-ALL0.999490.00051 T-ALL
T-ALL-C5 (testset)T-ALL0.846480.15352 T-ALL
T-ALL-C6T-ALL0.999964e-05 T-ALL
T-ALL-C7 (testset)T-ALL0.997160.00284 T-ALL
T-ALL-C8T-ALL0.023520.97648 other
T-ALL-C9T-ALL0.999220.00078 T-ALL
T-ALL-R1T-ALL0.999160.00084 T-ALL
T-ALL-R2T-ALL0.999928e-05 T-ALL
T-ALL-R3T-ALL0.999570.00043 T-ALL
T-ALL-R4T-ALL10 T-ALL
T-ALL-R5T-ALL0.909120.09088 T-ALL
T-ALL-R6T-ALL0.999610.00039 T-ALL
TEL-AML1-10other0.082110.91789 other
TEL-AML1-11 (testset)other0.001780.99822 other
TEL-AML1-12other0.001490.99851 other
TEL-AML1-13 (testset)other0.015640.98436 other
TEL-AML1-14other0.01440.9856 other
TEL-AML1-1other0.002650.99735 other
TEL-AML1-2other0.000430.99957 other
TEL-AML1-3other0.006060.99394 other
TEL-AML1-4other0.005830.99417 other
TEL-AML1-5 (testset)other0.000210.99979 other
TEL-AML1-6other8e-050.99992 other
TEL-AML1-7other0.083960.91604 other
TEL-AML1-8 (testset)other0.002990.99701 other
TEL-AML1-9other0.011040.98896 other
TEL-AML1-2M1 (testset)other0.382650.61735 other
TEL-AML1-2M2other0.002830.99717 other
TEL-AML1-2M3other0.001320.99868 other
TEL-AML1-2M4 (testset)other0.004570.99543 other
TEL-AML1-2M5other0.003450.99655 other
TEL-AML1-C10other0.002050.99795 other
TEL-AML1-C11other0.000590.99941 other
TEL-AML1-C12other0.004040.99596 other
TEL-AML1-C13other0.000380.99962 other
TEL-AML1-C14 (testset)other0.003010.99699 other
TEL-AML1-C15other0.017130.98287 other
TEL-AML1-C16other0.00390.9961 other
TEL-AML1-C17other0.000510.99949 other
TEL-AML1-C18other0.003380.99662 other
TEL-AML1-C19 (testset)other0.001150.99885 other
TEL-AML1-C1 (testset)other0.001730.99827 other
TEL-AML1-C20 (testset)other0.003130.99687 other
TEL-AML1-C21other9e-040.9991 other
TEL-AML1-C22other0.007380.99262 other
TEL-AML1-C23 (testset)other2e-050.99998 other
TEL-AML1-C24other0.072580.92742 other
TEL-AML1-C25other0.054710.94529 other
TEL-AML1-C26 (testset)other0.058580.94142 other
TEL-AML1-C27other0.065710.93429 other
TEL-AML1-C28 (testset)other0.015190.98481 other
TEL-AML1-C29other0.029870.97013 other
TEL-AML1-C2other0.004010.99599 other
TEL-AML1-C30other0.025990.97401 other
TEL-AML1-C31 (testset)other0.047360.95264 other
TEL-AML1-C32other0.040670.95933 other
TEL-AML1-C33 (testset)other0.006540.99346 other
TEL-AML1-C34other0.034930.96507 other
TEL-AML1-C35other0.046440.95356 other
TEL-AML1-C36 (testset)other0.001440.99856 other
TEL-AML1-C37other0.258940.74106 other
TEL-AML1-C38other0.008320.99168 other
TEL-AML1-C39other0.001210.99879 other
TEL-AML1-C3other0.000730.99927 other
TEL-AML1-C40other0.0040.996 other
TEL-AML1-C41other0.000280.99972 other
TEL-AML1-C42other0.002370.99763 other
TEL-AML1-C43other0.000430.99957 other
TEL-AML1-C44other0.00590.9941 other
TEL-AML1-C45other0.000370.99963 other
TEL-AML1-C46other0.014930.98507 other
TEL-AML1-C47other0.002940.99706 other
TEL-AML1-C48other0.462930.53707 other
TEL-AML1-C49 (testset)other0.001030.99897 other
TEL-AML1-C4 (testset)other0.007370.99263 other
TEL-AML1-C50other0.002630.99737 other
TEL-AML1-C51 (testset)other0.004080.99592 other
TEL-AML1-C52other0.094360.90564 other
TEL-AML1-C53 (testset)other0.01370.9863 other
TEL-AML1-C54other0.02950.9705 other
TEL-AML1-C55 (testset)other0.012450.98755 other
TEL-AML1-C56other0.017550.98245 other
TEL-AML1-C57other0.013360.98664 other
TEL-AML1-C5 (testset)other0.01040.9896 other
TEL-AML1-C6other0.001340.99866 other
TEL-AML1-C7other0.01360.9864 other
TEL-AML1-C8other0.000110.99989 other
TEL-AML1-C9other0.000610.99939 other
TEL-AML1-R1 (testset)other0.001160.99884 other
TEL-AML1-R2 (testset)other0.02930.9707 other
TEL-AML1-R3other0.000580.99942 other

 


Generated by StAM on Tue Sep 7 18:30:35 2004