GO:0045898

GO:0045898

regulation of transcriptional preinitiation complex formation (annotated genes)

Biological Process

Parent node

GO:0006357	regulation of transcription from Pol II promoter

This leaf node contains 3 genes

The following 2 of these are used in classification:

	Symbol	Genename	E2A-PBX1 score	other score
32063_at	PBX1	pre-B-cell leukemia transcription factor 1	0.6018	-0.0542
33355_at	PBX1	pre-B-cell leukemia transcription factor 1	0.4825	-0.0434

Performance on training data

• Error rate: 0
• Performance: 0.09919
• Redundancy: 2.75822

	Sensitivity	Specificity
E2A-PBX1	1	1
other	1	1

Performance on test data

• Error rate: 0.01835
• Performance: 0.11838
• Redundancy: 2.79575

	Sensitivity	Specificity
E2A-PBX1	0.77778	1
other	1	0.77778

Predictions

	Class	E2A-PBX1	other	Predictionn
BCR-ABL-1	other	0.03744	0.96256	other
BCR-ABL-2	other	0.03862	0.96138	other
BCR-ABL-3 (testset)	other	0.02821	0.97179	other
BCR-ABL-4	other	0.0397	0.9603	other
BCR-ABL-5	other	0.04711	0.95289	other
BCR-ABL-6	other	0.03537	0.96463	other
BCR-ABL-7	other	0.03832	0.96168	other
BCR-ABL-8	other	0.03012	0.96988	other
BCR-ABL-9	other	0.04533	0.95467	other
BCR-ABL-C1	other	0.04093	0.95907	other
BCR-ABL-Hyperdip-10	other	0.04222	0.95778	other
BCR-ABL-Hyperdip-R5	other	0.03615	0.96385	other
BCR-ABL-R1	other	0.02279	0.97721	other
BCR-ABL-R2 (testset)	other	0.0417	0.9583	other
BCR-ABL-R3	other	0.04351	0.95649	other
E2A-PBX1-10	E2A-PBX1	0.87109	0.12891	E2A-PBX1
E2A-PBX1-11 (testset)	E2A-PBX1	0.71418	0.28582	E2A-PBX1
E2A-PBX1-12	E2A-PBX1	0.8062	0.1938	E2A-PBX1
E2A-PBX1-13 (testset)	E2A-PBX1	0.96548	0.03452	E2A-PBX1
E2A-PBX1-1	E2A-PBX1	0.96724	0.03276	E2A-PBX1
E2A-PBX1-2	E2A-PBX1	0.762	0.238	E2A-PBX1
E2A-PBX1-3	E2A-PBX1	0.87586	0.12414	E2A-PBX1
E2A-PBX1-4 (testset)	E2A-PBX1	0.74087	0.25913	E2A-PBX1
E2A-PBX1-5 (testset)	E2A-PBX1	0.90379	0.09621	E2A-PBX1
E2A-PBX1-6	E2A-PBX1	0.96369	0.03631	E2A-PBX1
E2A-PBX1-7	E2A-PBX1	0.76608	0.23392	E2A-PBX1
E2A-PBX1-8	E2A-PBX1	0.91833	0.08167	E2A-PBX1
E2A-PBX1-9	E2A-PBX1	0.90683	0.09317	E2A-PBX1
E2A-PBX1-2M1	E2A-PBX1	0.91933	0.08067	E2A-PBX1
E2A-PBX1-C10 (testset)	E2A-PBX1	0.98871	0.01129	E2A-PBX1
E2A-PBX1-C11 (testset)	E2A-PBX1	0.4758	0.5242	other
E2A-PBX1-C12	E2A-PBX1	0.97319	0.02681	E2A-PBX1
E2A-PBX1-C1 (testset)	E2A-PBX1	0.47364	0.52636	other
E2A-PBX1-C2	E2A-PBX1	0.94392	0.05608	E2A-PBX1
E2A-PBX1-C3	E2A-PBX1	0.93436	0.06564	E2A-PBX1
E2A-PBX1-C4 (testset)	E2A-PBX1	0.96769	0.03231	E2A-PBX1
E2A-PBX1-C5	E2A-PBX1	0.82405	0.17595	E2A-PBX1
E2A-PBX1-C6	E2A-PBX1	0.87874	0.12126	E2A-PBX1
E2A-PBX1-C7	E2A-PBX1	0.96388	0.03612	E2A-PBX1
E2A-PBX1-C8	E2A-PBX1	0.95208	0.04792	E2A-PBX1
E2A-PBX1-C9 (testset)	E2A-PBX1	0.87398	0.12602	E2A-PBX1
E2A-PBX1-R1	E2A-PBX1	0.93864	0.06136	E2A-PBX1
Hyperdip-50-10 (testset)	other	0.04516	0.95484	other
Hyperdip-50-11 (testset)	other	0.02406	0.97594	other
Hyperdip-50-12	other	0.02423	0.97577	other
Hyperdip-50-13 (testset)	other	0.01959	0.98041	other
Hyperdip-50-14	other	0.03203	0.96797	other
Hyperdip-50-1 (testset)	other	0.03505	0.96495	other
Hyperdip-50-2 (testset)	other	0.02022	0.97978	other
Hyperdip-50-3	other	0.03475	0.96525	other
Hyperdip-50-4 (testset)	other	0.03209	0.96791	other
Hyperdip-50-5	other	0.05079	0.94921	other
Hyperdip-50-6	other	0.04137	0.95863	other
Hyperdip-50-7	other	0.05912	0.94088	other
Hyperdip-50-8 (testset)	other	0.03024	0.96976	other
Hyperdip-50-9	other	0.02484	0.97516	other
Hyperdip-50-2M1 (testset)	other	0.04216	0.95784	other
Hyperdip-50-2M2 (testset)	other	0.07543	0.92457	other
Hyperdip-50-C10	other	0.03478	0.96522	other
Hyperdip-50-C11	other	0.03529	0.96471	other
Hyperdip-50-C12	other	0.03921	0.96079	other
Hyperdip-50-C13	other	0.04478	0.95522	other
Hyperdip-50-C14	other	0.035	0.965	other
Hyperdip-50-C15	other	0.06175	0.93825	other
Hyperdip-50-C16 (testset)	other	0.02297	0.97703	other
Hyperdip-50-C17	other	0.02851	0.97149	other
Hyperdip-50-C18	other	0.03868	0.96132	other
Hyperdip-50-C19 (testset)	other	0.0216	0.9784	other
Hyperdip-50-C1	other	0.03822	0.96178	other
Hyperdip-50-C20	other	0.03118	0.96882	other
Hyperdip-50-C21	other	0.035	0.965	other
Hyperdip-50-C22	other	0.06073	0.93927	other
Hyperdip-50-C23	other	0.01812	0.98188	other
Hyperdip-50-C24 (testset)	other	0.02613	0.97387	other
Hyperdip-50-C25	other	0.03045	0.96955	other
Hyperdip-50-C26 (testset)	other	0.05173	0.94827	other
Hyperdip-50-C27-N (testset)	other	0.02486	0.97514	other
Hyperdip-50-C28	other	0.0462	0.9538	other
Hyperdip-50-C29	other	0.03838	0.96162	other
Hyperdip-50-C2 (testset)	other	0.06884	0.93116	other
Hyperdip-50-C30	other	0.02907	0.97093	other
Hyperdip-50-C31	other	0.03326	0.96674	other
Hyperdip-50-C32 (testset)	other	0.03332	0.96668	other
Hyperdip-50-C33	other	0.04946	0.95054	other
Hyperdip-50-C34	other	0.03082	0.96918	other
Hyperdip-50-C35 (testset)	other	0.04848	0.95152	other
Hyperdip-50-C36	other	0.03809	0.96191	other
Hyperdip-50-C37	other	0.054	0.946	other
Hyperdip-50-C38 (testset)	other	0.01794	0.98206	other
Hyperdip-50-C39	other	0.02722	0.97278	other
Hyperdip-50-C3	other	0.04808	0.95192	other
Hyperdip-50-C40 (testset)	other	0.04995	0.95005	other
Hyperdip-50-C41	other	0.05477	0.94523	other
Hyperdip-50-C42	other	0.02931	0.97069	other
Hyperdip-50-C43 (testset)	other	0.06773	0.93227	other
Hyperdip-50-C4	other	0.05114	0.94886	other
Hyperdip-50-C5 (testset)	other	0.03532	0.96468	other
Hyperdip-50-C6	other	0.04666	0.95334	other
Hyperdip-50-C7	other	0.03601	0.96399	other
Hyperdip-50-C8	other	0.02681	0.97319	other
Hyperdip-50-C9	other	0.04293	0.95707	other
Hyperdip-50-R1	other	0.03061	0.96939	other
Hyperdip-50-R2	other	0.03627	0.96373	other
Hyperdip-50-R3	other	0.10623	0.89377	other
Hyperdip-50-R4 (testset)	other	0.02548	0.97452	other
Hyperdip-50-R5 (testset)	other	0.0535	0.9465	other
Hyperdip47-50-1	other	0.04966	0.95034	other
Hyperdip47-50-2 (testset)	other	0.02278	0.97722	other
Hyperdip47-50-3	other	0.02517	0.97483	other
Hyperdip47-50-2M1 (testset)	other	0.02462	0.97538	other
Hyperdip47-50-C10	other	0.03971	0.96029	other
Hyperdip47-50-C11	other	0.03804	0.96196	other
Hyperdip47-50-C12	other	0.03331	0.96669	other
Hyperdip47-50-C13 (testset)	other	0.0275	0.9725	other
Hyperdip47-50-C14-N	other	0.02638	0.97362	other
Hyperdip47-50-C15 (testset)	other	0.0274	0.9726	other
Hyperdip47-50-C16 (testset)	other	0.04218	0.95782	other
Hyperdip47-50-C17	other	0.05464	0.94536	other
Hyperdip47-50-C18 (testset)	other	0.03441	0.96559	other
Hyperdip47-50-C19	other	0.0467	0.9533	other
Hyperdip47-50-C1	other	0.0371	0.9629	other
Hyperdip47-50-C2	other	0.04697	0.95303	other
Hyperdip47-50-C3-N	other	0.03472	0.96528	other
Hyperdip47-50-C4	other	0.05432	0.94568	other
Hyperdip47-50-C5 (testset)	other	0.04317	0.95683	other
Hyperdip47-50-C6	other	0.02968	0.97032	other
Hyperdip47-50-C7 (testset)	other	0.04053	0.95947	other
Hyperdip47-50-C8	other	0.04656	0.95344	other
Hyperdip47-50-C9 (testset)	other	0.03346	0.96654	other
Hypodip-1 (testset)	other	0.02491	0.97509	other
Hypodip-2 (testset)	other	0.06934	0.93066	other
Hypodip-2M1	other	0.07384	0.92616	other
Hypodip-C1	other	0.03095	0.96905	other
Hypodip-C2	other	0.08059	0.91941	other
Hypodip-C3	other	0.05526	0.94474	other
Hypodip-C4	other	0.03445	0.96555	other
Hypodip-C5	other	0.04209	0.95791	other
Hypodip-C6	other	0.03778	0.96222	other
MLL-1	other	0.02821	0.97179	other
MLL-2	other	0.02664	0.97336	other
MLL-3 (testset)	other	0.04646	0.95354	other
MLL-4	other	0.02374	0.97626	other
MLL-5	other	0.02453	0.97547	other
MLL-6	other	0.06164	0.93836	other
MLL-7 (testset)	other	0.03384	0.96616	other
MLL-8	other	0.05203	0.94797	other
MLL-2M1	other	0.04897	0.95103	other
MLL-2M2	other	0.03006	0.96994	other
MLL-C1	other	0.02057	0.97943	other
MLL-C2 (testset)	other	0.02692	0.97308	other
MLL-C3 (testset)	other	0.03585	0.96415	other
MLL-C4	other	0.03876	0.96124	other
MLL-C5	other	0.05717	0.94283	other
MLL-C6 (testset)	other	0.05679	0.94321	other
MLL-R1	other	0.06531	0.93469	other
MLL-R2 (testset)	other	0.04353	0.95647	other
MLL-R3 (testset)	other	0.03879	0.96121	other
MLL-R4 (testset)	other	0.03482	0.96518	other
Normal-1	other	0.05703	0.94297	other
Normal-2	other	0.02973	0.97027	other
Normal-3	other	0.03997	0.96003	other
Normal-C1-N	other	0.0514	0.9486	other
Normal-C10	other	0.07163	0.92837	other
Normal-C11-N (testset)	other	0.0415	0.9585	other
Normal-C12 (testset)	other	0.02404	0.97596	other
Normal-C2-N	other	0.0467	0.9533	other
Normal-C3-N	other	0.05986	0.94014	other
Normal-C4-N	other	0.04068	0.95932	other
Normal-C5 (testset)	other	0.02918	0.97082	other
Normal-C6	other	0.0618	0.9382	other
Normal-C7-N	other	0.10637	0.89363	other
Normal-C8	other	0.02875	0.97125	other
Normal-C9 (testset)	other	0.03359	0.96641	other
Normal-R1	other	0.04255	0.95745	other
Normal-R2-N	other	0.03994	0.96006	other
Normal-R3 (testset)	other	0.03982	0.96018	other
Pseudodip-1 (testset)	other	0.03484	0.96516	other
Pseudodip-2	other	0.04392	0.95608	other
Pseudodip-3	other	0.03848	0.96152	other
Pseudodip-4	other	0.02055	0.97945	other
Pseudodip-5	other	0.03045	0.96955	other
Pseudodip-6	other	0.04136	0.95864	other
Pseudodip-7 (testset)	other	0.03778	0.96222	other
Pseudodip-8-N (testset)	other	0.03042	0.96958	other
Pseudodip-9	other	0.03958	0.96042	other
Pseudodip-C10	other	0.02805	0.97195	other
Pseudodip-C11	other	0.0238	0.9762	other
Pseudodip-C12	other	0.06818	0.93182	other
Pseudodip-C13	other	0.05177	0.94823	other
Pseudodip-C14 (testset)	other	0.0404	0.9596	other
Pseudodip-C15	other	0.03185	0.96815	other
Pseudodip-C16-N (testset)	other	0.03048	0.96952	other
Pseudodip-C17 (testset)	other	0.02196	0.97804	other
Pseudodip-C18	other	0.04376	0.95624	other
Pseudodip-C19	other	0.03151	0.96849	other
Pseudodip-C1	other	0.05341	0.94659	other
Pseudodip-C2-N (testset)	other	0.04676	0.95324	other
Pseudodip-C3	other	0.05276	0.94724	other
Pseudodip-C4	other	0.11181	0.88819	other
Pseudodip-C5 (testset)	other	0.05104	0.94896	other
Pseudodip-C6	other	0.0585	0.9415	other
Pseudodip-C7 (testset)	other	0.05289	0.94711	other
Pseudodip-C8 (testset)	other	0.02584	0.97416	other
Pseudodip-C9	other	0.03302	0.96698	other
Pseudodip-R1-N	other	0.02635	0.97365	other
T-ALL-10	other	0.03284	0.96716	other
T-ALL-1	other	0.04375	0.95625	other
T-ALL-2	other	0.0577	0.9423	other
T-ALL-3	other	0.01975	0.98025	other
T-ALL-4 (testset)	other	0.04035	0.95965	other
T-ALL-5	other	0.0272	0.9728	other
T-ALL-6	other	0.02298	0.97702	other
T-ALL-7 (testset)	other	0.02818	0.97182	other
T-ALL-8	other	0.02075	0.97925	other
T-ALL-9 (testset)	other	0.02941	0.97059	other
T-ALL-2M1	other	0.02858	0.97142	other
T-ALL-C10	other	0.05044	0.94956	other
T-ALL-C11	other	0.03054	0.96946	other
T-ALL-C12	other	0.05634	0.94366	other
T-ALL-C13	other	0.04595	0.95405	other
T-ALL-C14	other	0.04753	0.95247	other
T-ALL-C15 (testset)	other	0.02737	0.97263	other
T-ALL-C16	other	0.04315	0.95685	other
T-ALL-C17	other	0.05563	0.94437	other
T-ALL-C18 (testset)	other	0.03651	0.96349	other
T-ALL-C19 (testset)	other	0.03588	0.96412	other
T-ALL-C1 (testset)	other	0.08056	0.91944	other
T-ALL-C20	other	0.05621	0.94379	other
T-ALL-C21	other	0.05178	0.94822	other
T-ALL-C22	other	0.05717	0.94283	other
T-ALL-C23	other	0.04333	0.95667	other
T-ALL-C24	other	0.02535	0.97465	other
T-ALL-C25	other	0.02703	0.97297	other
T-ALL-C26 (testset)	other	0.06009	0.93991	other
T-ALL-C2 (testset)	other	0.0227	0.9773	other
T-ALL-C3	other	0.03711	0.96289	other
T-ALL-C4 (testset)	other	0.05485	0.94515	other
T-ALL-C5 (testset)	other	0.04062	0.95938	other
T-ALL-C6 (testset)	other	0.02828	0.97172	other
T-ALL-C7	other	0.06419	0.93581	other
T-ALL-C8	other	0.09557	0.90443	other
T-ALL-C9	other	0.04218	0.95782	other
T-ALL-R1	other	0.04375	0.95625	other
T-ALL-R2	other	0.02455	0.97545	other
T-ALL-R3	other	0.03167	0.96833	other
T-ALL-R4	other	0.0303	0.9697	other
T-ALL-R5 (testset)	other	0.03771	0.96229	other
T-ALL-R6	other	0.023	0.977	other
TEL-AML1-10 (testset)	other	0.02958	0.97042	other
TEL-AML1-11	other	0.02424	0.97576	other
TEL-AML1-12 (testset)	other	0.03817	0.96183	other
TEL-AML1-13	other	0.04366	0.95634	other
TEL-AML1-14	other	0.03783	0.96217	other
TEL-AML1-1 (testset)	other	0.03103	0.96897	other
TEL-AML1-2	other	0.0387	0.9613	other
TEL-AML1-3 (testset)	other	0.04318	0.95682	other
TEL-AML1-4	other	0.02098	0.97902	other
TEL-AML1-5	other	0.05532	0.94468	other
TEL-AML1-6 (testset)	other	0.03785	0.96215	other
TEL-AML1-7 (testset)	other	0.03197	0.96803	other
TEL-AML1-8	other	0.04279	0.95721	other
TEL-AML1-9	other	0.03878	0.96122	other
TEL-AML1-2M1 (testset)	other	0.02373	0.97627	other
TEL-AML1-2M2	other	0.04509	0.95491	other
TEL-AML1-2M3	other	0.04334	0.95666	other
TEL-AML1-2M4 (testset)	other	0.04996	0.95004	other
TEL-AML1-2M5	other	0.03331	0.96669	other
TEL-AML1-C10 (testset)	other	0.05787	0.94213	other
TEL-AML1-C11	other	0.03498	0.96502	other
TEL-AML1-C12 (testset)	other	0.09209	0.90791	other
TEL-AML1-C13 (testset)	other	0.02883	0.97117	other
TEL-AML1-C14	other	0.0452	0.9548	other
TEL-AML1-C15	other	0.04432	0.95568	other
TEL-AML1-C16	other	0.04908	0.95092	other
TEL-AML1-C17 (testset)	other	0.05582	0.94418	other
TEL-AML1-C18 (testset)	other	0.04687	0.95313	other
TEL-AML1-C19	other	0.05473	0.94527	other
TEL-AML1-C1	other	0.06134	0.93866	other
TEL-AML1-C20	other	0.05493	0.94507	other
TEL-AML1-C21	other	0.06136	0.93864	other
TEL-AML1-C22	other	0.07554	0.92446	other
TEL-AML1-C23	other	0.07517	0.92483	other
TEL-AML1-C24	other	0.02404	0.97596	other
TEL-AML1-C25 (testset)	other	0.05668	0.94332	other
TEL-AML1-C26	other	0.0247	0.9753	other
TEL-AML1-C27 (testset)	other	0.04998	0.95002	other
TEL-AML1-C28	other	0.03561	0.96439	other
TEL-AML1-C29 (testset)	other	0.03286	0.96714	other
TEL-AML1-C2	other	0.05912	0.94088	other
TEL-AML1-C30	other	0.02684	0.97316	other
TEL-AML1-C31 (testset)	other	0.02837	0.97163	other
TEL-AML1-C32	other	0.03565	0.96435	other
TEL-AML1-C33	other	0.05165	0.94835	other
TEL-AML1-C34 (testset)	other	0.0267	0.9733	other
TEL-AML1-C35	other	0.03254	0.96746	other
TEL-AML1-C36	other	0.04827	0.95173	other
TEL-AML1-C37	other	0.04454	0.95546	other
TEL-AML1-C38 (testset)	other	0.02709	0.97291	other
TEL-AML1-C39	other	0.03647	0.96353	other
TEL-AML1-C3 (testset)	other	0.03191	0.96809	other
TEL-AML1-C40 (testset)	other	0.01934	0.98066	other
TEL-AML1-C41	other	0.06125	0.93875	other
TEL-AML1-C42 (testset)	other	0.04903	0.95097	other
TEL-AML1-C43	other	0.04021	0.95979	other
TEL-AML1-C44 (testset)	other	0.04159	0.95841	other
TEL-AML1-C45	other	0.05415	0.94585	other
TEL-AML1-C46 (testset)	other	0.03437	0.96563	other
TEL-AML1-C47	other	0.04174	0.95826	other
TEL-AML1-C48	other	0.03169	0.96831	other
TEL-AML1-C49	other	0.04825	0.95175	other
TEL-AML1-C4	other	0.0421	0.9579	other
TEL-AML1-C50	other	0.06081	0.93919	other
TEL-AML1-C51	other	0.04671	0.95329	other
TEL-AML1-C52	other	0.02474	0.97526	other
TEL-AML1-C53	other	0.05252	0.94748	other
TEL-AML1-C54	other	0.04259	0.95741	other
TEL-AML1-C55	other	0.07251	0.92749	other
TEL-AML1-C56	other	0.07461	0.92539	other
TEL-AML1-C57 (testset)	other	0.04735	0.95265	other
TEL-AML1-C5 (testset)	other	0.05127	0.94873	other
TEL-AML1-C6	other	0.03592	0.96408	other
TEL-AML1-C7	other	0.04903	0.95097	other
TEL-AML1-C8	other	0.03725	0.96275	other
TEL-AML1-C9 (testset)	other	0.08314	0.91686	other
TEL-AML1-R1	other	0.07235	0.92765	other
TEL-AML1-R2	other	0.02898	0.97102	other
TEL-AML1-R3 (testset)	other	0.06012	0.93988	other