GO:0000004

GO:0000004

biological_process unknown (annotated genes)

Biological Process

Parent node

GO:0008150	biological_process

This leaf node contains 525 genes

The following 25 of these are used in classification:

	Symbol	Genename	BCR-ABL score	other score
37600_at	ECM1	extracellular matrix protein 1	1.2352	-0.0594
40196_at	CTDSPL	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like	0.5535	-0.0266
32253_at	RERE	arginine-glutamic acid dipeptide (RE) repeats	0.5	-0.024
35912_at	MUC4	mucin 4, tracheobronchial	0.4666	-0.0224
34780_at	PLXNB2	plexin B2	0.3935	-0.0189
39634_at	SLIT2	slit homolog 2 (Drosophila)	0.3631	-0.0175
38704_at	MACF1	microtubule-actin crosslinking factor 1	0.2681	-0.0129
31508_at	TXNIP	thioredoxin interacting protein	0.2675	-0.0129
37326_at	LMO6	LIM domain only 6	0.2565	-0.0123
41202_s_at	CTDSP2	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	0.1641	-0.0079
181_g_at	LENG4	leukocyte receptor cluster (LRC) member 4	0.1492	-0.0072
38364_at	TLE4	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.1311	-0.0063
33385_g_at	CAST	calpastatin	0.13	-0.0062
31623_f_at	MT1A	metallothionein 1A (functional)	0.1076	-0.0052
41320_s_at	LRRFIP1	leucine rich repeat (in FLII) interacting protein 1	0.1047	-0.005
40234_at	DGCR6	DiGeorge syndrome critical region gene 6	0.0884	-0.0043
37690_at	ILVBL	ilvB (bacterial acetolactate synthase)-like	0.0518	-0.0025
946_at	TCTEL1	t-complex-associated-testis-expressed 1-like 1	0.051	-0.0025
180_at	LENG4	leukocyte receptor cluster (LRC) member 4	0.0472	-0.0023
40692_at	TLE4	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.0438	-0.0021
333_s_at	RBMS1	RNA binding motif, single stranded interacting protein 1	-0.0387	0.0019
40045_g_at	C18orf1	chromosome 18 open reading frame 1	0.0367	-0.0018
40424_at	PROSC	proline synthetase co-transcribed homolog (bacterial)	0.0335	-0.0016
37026_at	COPEB	core promoter element binding protein	0.0197	-9e-04
36790_at	TPM1	tropomyosin 1 (alpha)	-0.0146	7e-04

Performance on training data

• Error rate: 0.02752
• Performance: 0.15767
• Redundancy: 3.72405

	Sensitivity	Specificity
BCR-ABL	0.6	0.99038
other	0.99038	0.6

Performance on test data

• Error rate: 0.01835
• Performance: 0.1734
• Redundancy: 3.54852

	Sensitivity	Specificity
BCR-ABL	0.6	1
other	1	0.6

Predictions

	Class	BCR-ABL	other	Predictionn
BCR-ABL-1	BCR-ABL	0.17304	0.82696	other
BCR-ABL-2 (testset)	BCR-ABL	0.53381	0.46619	BCR-ABL
BCR-ABL-3 (testset)	BCR-ABL	0.61006	0.38994	BCR-ABL
BCR-ABL-4	BCR-ABL	0.91471	0.08529	BCR-ABL
BCR-ABL-5 (testset)	BCR-ABL	0.07958	0.92042	other
BCR-ABL-6	BCR-ABL	0.97266	0.02734	BCR-ABL
BCR-ABL-7	BCR-ABL	0.4912	0.5088	other
BCR-ABL-8	BCR-ABL	0.95526	0.04474	BCR-ABL
BCR-ABL-9	BCR-ABL	0.32477	0.67523	other
BCR-ABL-C1 (testset)	BCR-ABL	0.55924	0.44076	BCR-ABL
BCR-ABL-Hyperdip-10	BCR-ABL	0.56335	0.43665	BCR-ABL
BCR-ABL-Hyperdip-R5	BCR-ABL	0.20294	0.79706	other
BCR-ABL-R1	BCR-ABL	0.73092	0.26908	BCR-ABL
BCR-ABL-R2	BCR-ABL	0.86639	0.13361	BCR-ABL
BCR-ABL-R3 (testset)	BCR-ABL	0.44079	0.55921	other
E2A-PBX1-10	other	0.00127	0.99873	other
E2A-PBX1-11	other	7e-04	0.9993	other
E2A-PBX1-12	other	0.00041	0.99959	other
E2A-PBX1-13	other	0.00705	0.99295	other
E2A-PBX1-1 (testset)	other	0.00264	0.99736	other
E2A-PBX1-2	other	0.00249	0.99751	other
E2A-PBX1-3	other	0.00212	0.99788	other
E2A-PBX1-4	other	0.00464	0.99536	other
E2A-PBX1-5	other	0.00327	0.99673	other
E2A-PBX1-6	other	0.00282	0.99718	other
E2A-PBX1-7	other	0.00226	0.99774	other
E2A-PBX1-8	other	0.00382	0.99618	other
E2A-PBX1-9	other	0.00167	0.99833	other
E2A-PBX1-2M1	other	0.00193	0.99807	other
E2A-PBX1-C10 (testset)	other	0.01834	0.98166	other
E2A-PBX1-C11 (testset)	other	0.00106	0.99894	other
E2A-PBX1-C12	other	0.0085	0.9915	other
E2A-PBX1-C1	other	0.00277	0.99723	other
E2A-PBX1-C2	other	0.00125	0.99875	other
E2A-PBX1-C3	other	0.00261	0.99739	other
E2A-PBX1-C4	other	0.00239	0.99761	other
E2A-PBX1-C5 (testset)	other	0.00071	0.99929	other
E2A-PBX1-C6	other	0.00233	0.99767	other
E2A-PBX1-C7	other	0.00127	0.99873	other
E2A-PBX1-C8	other	0.00785	0.99215	other
E2A-PBX1-C9	other	0.00099	0.99901	other
E2A-PBX1-R1	other	0.00076	0.99924	other
Hyperdip-50-10	other	0.02323	0.97677	other
Hyperdip-50-11	other	0.00888	0.99112	other
Hyperdip-50-12 (testset)	other	0.01383	0.98617	other
Hyperdip-50-13	other	0.00916	0.99084	other
Hyperdip-50-14 (testset)	other	0.1265	0.8735	other
Hyperdip-50-1	other	0.05004	0.94996	other
Hyperdip-50-2	other	0.03823	0.96177	other
Hyperdip-50-3 (testset)	other	0.03891	0.96109	other
Hyperdip-50-4 (testset)	other	0.12856	0.87144	other
Hyperdip-50-5	other	0.01765	0.98235	other
Hyperdip-50-6	other	0.04719	0.95281	other
Hyperdip-50-7	other	0.02456	0.97544	other
Hyperdip-50-8	other	0.03047	0.96953	other
Hyperdip-50-9	other	0.00158	0.99842	other
Hyperdip-50-2M1	other	0.0145	0.9855	other
Hyperdip-50-2M2 (testset)	other	0.00071	0.99929	other
Hyperdip-50-C10 (testset)	other	0.00589	0.99411	other
Hyperdip-50-C11	other	0.0311	0.9689	other
Hyperdip-50-C12	other	0.01246	0.98754	other
Hyperdip-50-C13 (testset)	other	0.02993	0.97007	other
Hyperdip-50-C14 (testset)	other	0.01243	0.98757	other
Hyperdip-50-C15 (testset)	other	0.00582	0.99418	other
Hyperdip-50-C16	other	0.01151	0.98849	other
Hyperdip-50-C17	other	0.02623	0.97377	other
Hyperdip-50-C18 (testset)	other	0.15491	0.84509	other
Hyperdip-50-C19	other	0.24421	0.75579	other
Hyperdip-50-C1 (testset)	other	0.04066	0.95934	other
Hyperdip-50-C20	other	0.08372	0.91628	other
Hyperdip-50-C21	other	0.2142	0.7858	other
Hyperdip-50-C22	other	0.0348	0.9652	other
Hyperdip-50-C23	other	0.00945	0.99055	other
Hyperdip-50-C24 (testset)	other	0.04687	0.95313	other
Hyperdip-50-C25	other	0.04359	0.95641	other
Hyperdip-50-C26	other	0.00572	0.99428	other
Hyperdip-50-C27-N	other	0.00365	0.99635	other
Hyperdip-50-C28	other	0.03191	0.96809	other
Hyperdip-50-C29	other	0.0085	0.9915	other
Hyperdip-50-C2	other	0.00372	0.99628	other
Hyperdip-50-C30	other	0.03076	0.96924	other
Hyperdip-50-C31	other	0.11122	0.88878	other
Hyperdip-50-C32	other	0.40397	0.59603	other
Hyperdip-50-C33 (testset)	other	0.00075	0.99925	other
Hyperdip-50-C34	other	0.6344	0.3656	BCR-ABL
Hyperdip-50-C35	other	0.01794	0.98206	other
Hyperdip-50-C36	other	0.19972	0.80028	other
Hyperdip-50-C37	other	0.04289	0.95711	other
Hyperdip-50-C38	other	0.24631	0.75369	other
Hyperdip-50-C39	other	0.03907	0.96093	other
Hyperdip-50-C3	other	0.00265	0.99735	other
Hyperdip-50-C40 (testset)	other	0.0157	0.9843	other
Hyperdip-50-C41	other	0.04249	0.95751	other
Hyperdip-50-C42 (testset)	other	0.13362	0.86638	other
Hyperdip-50-C43	other	0.0013	0.9987	other
Hyperdip-50-C4	other	0.04442	0.95558	other
Hyperdip-50-C5 (testset)	other	0.00383	0.99617	other
Hyperdip-50-C6	other	0.00734	0.99266	other
Hyperdip-50-C7	other	0.04913	0.95087	other
Hyperdip-50-C8 (testset)	other	0.13909	0.86091	other
Hyperdip-50-C9	other	0.01137	0.98863	other
Hyperdip-50-R1	other	0.08262	0.91738	other
Hyperdip-50-R2	other	0.01481	0.98519	other
Hyperdip-50-R3	other	0.00109	0.99891	other
Hyperdip-50-R4 (testset)	other	0.00936	0.99064	other
Hyperdip-50-R5 (testset)	other	0.01364	0.98636	other
Hyperdip47-50-1 (testset)	other	0.2648	0.7352	other
Hyperdip47-50-2 (testset)	other	0.05508	0.94492	other
Hyperdip47-50-3	other	0.03804	0.96196	other
Hyperdip47-50-2M1	other	0.36316	0.63684	other
Hyperdip47-50-C10 (testset)	other	0.06037	0.93963	other
Hyperdip47-50-C11	other	0.01308	0.98692	other
Hyperdip47-50-C12	other	0.18184	0.81816	other
Hyperdip47-50-C13	other	0.01908	0.98092	other
Hyperdip47-50-C14-N	other	0.01244	0.98756	other
Hyperdip47-50-C15	other	0.0266	0.9734	other
Hyperdip47-50-C16	other	0.00204	0.99796	other
Hyperdip47-50-C17 (testset)	other	0.10318	0.89682	other
Hyperdip47-50-C18 (testset)	other	0.02878	0.97122	other
Hyperdip47-50-C19	other	0.006	0.994	other
Hyperdip47-50-C1	other	0.00154	0.99846	other
Hyperdip47-50-C2 (testset)	other	0.00588	0.99412	other
Hyperdip47-50-C3-N (testset)	other	0.00695	0.99305	other
Hyperdip47-50-C4	other	0.00305	0.99695	other
Hyperdip47-50-C5	other	0.00407	0.99593	other
Hyperdip47-50-C6	other	0.17686	0.82314	other
Hyperdip47-50-C7	other	7e-04	0.9993	other
Hyperdip47-50-C8	other	0.01581	0.98419	other
Hyperdip47-50-C9	other	0.88799	0.11201	BCR-ABL
Hypodip-1	other	0.06303	0.93697	other
Hypodip-2 (testset)	other	0.00893	0.99107	other
Hypodip-2M1	other	0.10227	0.89773	other
Hypodip-C1 (testset)	other	0.19825	0.80175	other
Hypodip-C2	other	0.00492	0.99508	other
Hypodip-C3 (testset)	other	0.04008	0.95992	other
Hypodip-C4	other	0.04353	0.95647	other
Hypodip-C5	other	0.03367	0.96633	other
Hypodip-C6	other	0.07346	0.92654	other
MLL-1 (testset)	other	0.00151	0.99849	other
MLL-2 (testset)	other	0.00117	0.99883	other
MLL-3 (testset)	other	0.03722	0.96278	other
MLL-4	other	0.01127	0.98873	other
MLL-5	other	0.00421	0.99579	other
MLL-6 (testset)	other	0.02339	0.97661	other
MLL-7	other	0.00306	0.99694	other
MLL-8	other	0.00998	0.99002	other
MLL-2M1	other	0.00432	0.99568	other
MLL-2M2 (testset)	other	0.00936	0.99064	other
MLL-C1	other	0.02556	0.97444	other
MLL-C2	other	0.03576	0.96424	other
MLL-C3	other	0.00548	0.99452	other
MLL-C4 (testset)	other	0.00223	0.99777	other
MLL-C5	other	0.01382	0.98618	other
MLL-C6 (testset)	other	0.00258	0.99742	other
MLL-R1 (testset)	other	0.00063	0.99937	other
MLL-R2	other	0.00484	0.99516	other
MLL-R3	other	0.01175	0.98825	other
MLL-R4 (testset)	other	0.00381	0.99619	other
Normal-1	other	0.00065	0.99935	other
Normal-2 (testset)	other	0.24274	0.75726	other
Normal-3 (testset)	other	0.46347	0.53653	other
Normal-C1-N	other	0.0046	0.9954	other
Normal-C10 (testset)	other	0.00632	0.99368	other
Normal-C11-N	other	0.00176	0.99824	other
Normal-C12 (testset)	other	0.00032	0.99968	other
Normal-C2-N (testset)	other	0.01116	0.98884	other
Normal-C3-N	other	0.00126	0.99874	other
Normal-C4-N	other	0.00382	0.99618	other
Normal-C5 (testset)	other	0.03834	0.96166	other
Normal-C6 (testset)	other	0.02419	0.97581	other
Normal-C7-N	other	0.00202	0.99798	other
Normal-C8 (testset)	other	0.04067	0.95933	other
Normal-C9 (testset)	other	0.05627	0.94373	other
Normal-R1	other	0.21149	0.78851	other
Normal-R2-N	other	0.02792	0.97208	other
Normal-R3 (testset)	other	0.00349	0.99651	other
Pseudodip-1 (testset)	other	0.34721	0.65279	other
Pseudodip-2	other	0.05714	0.94286	other
Pseudodip-3 (testset)	other	0.05417	0.94583	other
Pseudodip-4	other	0.25929	0.74071	other
Pseudodip-5	other	0.34289	0.65711	other
Pseudodip-6	other	0.04937	0.95063	other
Pseudodip-7	other	0.19715	0.80285	other
Pseudodip-8-N (testset)	other	0.00982	0.99018	other
Pseudodip-9	other	0.24223	0.75777	other
Pseudodip-C10	other	0.02545	0.97455	other
Pseudodip-C11	other	0.46615	0.53385	other
Pseudodip-C12	other	0.03131	0.96869	other
Pseudodip-C13	other	0.01305	0.98695	other
Pseudodip-C14 (testset)	other	0.17542	0.82458	other
Pseudodip-C15	other	0.0032	0.9968	other
Pseudodip-C16-N	other	0.00427	0.99573	other
Pseudodip-C17	other	0.02088	0.97912	other
Pseudodip-C18 (testset)	other	0.0109	0.9891	other
Pseudodip-C19	other	0.08203	0.91797	other
Pseudodip-C1	other	0.08107	0.91893	other
Pseudodip-C2-N	other	0.00282	0.99718	other
Pseudodip-C3 (testset)	other	0.00377	0.99623	other
Pseudodip-C4	other	0.00049	0.99951	other
Pseudodip-C5 (testset)	other	0.01069	0.98931	other
Pseudodip-C6	other	0.01915	0.98085	other
Pseudodip-C7	other	0.21112	0.78888	other
Pseudodip-C8	other	0.00476	0.99524	other
Pseudodip-C9	other	0.0572	0.9428	other
Pseudodip-R1-N (testset)	other	0.02112	0.97888	other
T-ALL-10 (testset)	other	0.00038	0.99962	other
T-ALL-1	other	0.00135	0.99865	other
T-ALL-2	other	0.00012	0.99988	other
T-ALL-3 (testset)	other	0.00751	0.99249	other
T-ALL-4	other	0.00055	0.99945	other
T-ALL-5 (testset)	other	0.00078	0.99922	other
T-ALL-6	other	0.00704	0.99296	other
T-ALL-7	other	0.00066	0.99934	other
T-ALL-8	other	0.00051	0.99949	other
T-ALL-9 (testset)	other	0.02556	0.97444	other
T-ALL-2M1	other	0.00219	0.99781	other
T-ALL-C10	other	0.00093	0.99907	other
T-ALL-C11	other	0.00231	0.99769	other
T-ALL-C12 (testset)	other	0.00188	0.99812	other
T-ALL-C13 (testset)	other	0.00142	0.99858	other
T-ALL-C14 (testset)	other	0.00032	0.99968	other
T-ALL-C15	other	0.00166	0.99834	other
T-ALL-C16	other	1e-04	0.9999	other
T-ALL-C17	other	0.00682	0.99318	other
T-ALL-C18 (testset)	other	0.0029	0.9971	other
T-ALL-C19	other	0.00076	0.99924	other
T-ALL-C1	other	9e-04	0.9991	other
T-ALL-C20 (testset)	other	0.00154	0.99846	other
T-ALL-C21	other	0.00285	0.99715	other
T-ALL-C22 (testset)	other	0.0036	0.9964	other
T-ALL-C23	other	0.0025	0.9975	other
T-ALL-C24	other	0.00055	0.99945	other
T-ALL-C25	other	0.00113	0.99887	other
T-ALL-C26	other	2e-04	0.9998	other
T-ALL-C2	other	0.00044	0.99956	other
T-ALL-C3 (testset)	other	0.00202	0.99798	other
T-ALL-C4	other	0.00045	0.99955	other
T-ALL-C5	other	0.00573	0.99427	other
T-ALL-C6	other	0.00426	0.99574	other
T-ALL-C7 (testset)	other	0.00892	0.99108	other
T-ALL-C8	other	0.00068	0.99932	other
T-ALL-C9	other	0.00159	0.99841	other
T-ALL-R1	other	0.00084	0.99916	other
T-ALL-R2 (testset)	other	0.04666	0.95334	other
T-ALL-R3	other	0.00064	0.99936	other
T-ALL-R4	other	0.00117	0.99883	other
T-ALL-R5 (testset)	other	0.07293	0.92707	other
T-ALL-R6	other	0.00794	0.99206	other
TEL-AML1-10	other	0.01586	0.98414	other
TEL-AML1-11	other	0.0021	0.9979	other
TEL-AML1-12 (testset)	other	0.015	0.985	other
TEL-AML1-13	other	0.0034	0.9966	other
TEL-AML1-14	other	0.00683	0.99317	other
TEL-AML1-1 (testset)	other	0.002	0.998	other
TEL-AML1-2	other	0.00815	0.99185	other
TEL-AML1-3	other	0.07462	0.92538	other
TEL-AML1-4	other	0.00725	0.99275	other
TEL-AML1-5 (testset)	other	0.00101	0.99899	other
TEL-AML1-6	other	0.00095	0.99905	other
TEL-AML1-7 (testset)	other	0.01286	0.98714	other
TEL-AML1-8	other	0.00109	0.99891	other
TEL-AML1-9 (testset)	other	0.00532	0.99468	other
TEL-AML1-2M1 (testset)	other	0.02989	0.97011	other
TEL-AML1-2M2	other	0.00714	0.99286	other
TEL-AML1-2M3 (testset)	other	0.0013	0.9987	other
TEL-AML1-2M4 (testset)	other	0.00687	0.99313	other
TEL-AML1-2M5	other	0.01377	0.98623	other
TEL-AML1-C10	other	0.00578	0.99422	other
TEL-AML1-C11	other	0.01439	0.98561	other
TEL-AML1-C12	other	0.00411	0.99589	other
TEL-AML1-C13	other	0.00809	0.99191	other
TEL-AML1-C14	other	0.00463	0.99537	other
TEL-AML1-C15 (testset)	other	0.01384	0.98616	other
TEL-AML1-C16 (testset)	other	0.04185	0.95815	other
TEL-AML1-C17 (testset)	other	0.00063	0.99937	other
TEL-AML1-C18	other	0.01989	0.98011	other
TEL-AML1-C19 (testset)	other	0.00656	0.99344	other
TEL-AML1-C1	other	0.00425	0.99575	other
TEL-AML1-C20	other	0.01033	0.98967	other
TEL-AML1-C21	other	0.00261	0.99739	other
TEL-AML1-C22	other	0.00806	0.99194	other
TEL-AML1-C23	other	0.00133	0.99867	other
TEL-AML1-C24	other	0.02072	0.97928	other
TEL-AML1-C25 (testset)	other	0.00376	0.99624	other
TEL-AML1-C26 (testset)	other	0.0506	0.9494	other
TEL-AML1-C27	other	0.00338	0.99662	other
TEL-AML1-C28	other	0.04003	0.95997	other
TEL-AML1-C29	other	0.01651	0.98349	other
TEL-AML1-C2	other	0.00987	0.99013	other
TEL-AML1-C30	other	0.04201	0.95799	other
TEL-AML1-C31 (testset)	other	0.01457	0.98543	other
TEL-AML1-C32 (testset)	other	0.02723	0.97277	other
TEL-AML1-C33	other	0.00231	0.99769	other
TEL-AML1-C34 (testset)	other	0.01179	0.98821	other
TEL-AML1-C35 (testset)	other	0.03912	0.96088	other
TEL-AML1-C36 (testset)	other	0.01677	0.98323	other
TEL-AML1-C37	other	0.02	0.98	other
TEL-AML1-C38 (testset)	other	0.00887	0.99113	other
TEL-AML1-C39 (testset)	other	0.001	0.999	other
TEL-AML1-C3 (testset)	other	0.01139	0.98861	other
TEL-AML1-C40	other	0.00638	0.99362	other
TEL-AML1-C41	other	0.00833	0.99167	other
TEL-AML1-C42	other	0.00394	0.99606	other
TEL-AML1-C43	other	0.00335	0.99665	other
TEL-AML1-C44	other	0.00572	0.99428	other
TEL-AML1-C45	other	0.00135	0.99865	other
TEL-AML1-C46	other	0.00711	0.99289	other
TEL-AML1-C47	other	0.01058	0.98942	other
TEL-AML1-C48	other	0.02924	0.97076	other
TEL-AML1-C49 (testset)	other	0.00528	0.99472	other
TEL-AML1-C4 (testset)	other	0.01309	0.98691	other
TEL-AML1-C50	other	0.00315	0.99685	other
TEL-AML1-C51	other	0.0121	0.9879	other
TEL-AML1-C52 (testset)	other	0.04931	0.95069	other
TEL-AML1-C53	other	0.02341	0.97659	other
TEL-AML1-C54 (testset)	other	0.01046	0.98954	other
TEL-AML1-C55	other	0.00409	0.99591	other
TEL-AML1-C56	other	0.00873	0.99127	other
TEL-AML1-C57 (testset)	other	0.01483	0.98517	other
TEL-AML1-C5	other	0.01503	0.98497	other
TEL-AML1-C6	other	0.00537	0.99463	other
TEL-AML1-C7	other	0.00883	0.99117	other
TEL-AML1-C8	other	0.00026	0.99974	other
TEL-AML1-C9 (testset)	other	0.00249	0.99751	other
TEL-AML1-R1	other	0.02135	0.97865	other
TEL-AML1-R2 (testset)	other	0.03865	0.96135	other
TEL-AML1-R3 (testset)	other	0.0055	0.9945	other