GO:0008283


GO:0008283

cell proliferation
(annotated genes)

Biological
Process

Parent node

This leaf node contains 293 genes

The following 42 of these are used in classification:

 SymbolGenenameNORMAL scoreSQUAMOUS score
39631_atEMP2 epithelial membrane protein 21.1462-0.9279
1884_s_atPCNA proliferating cell nuclear antigen-0.73410.5943
37168_atLAMP3 lysosomal-associated membrane protein 30.7137-0.5777
39109_atTPX2 TPX2, microtubule-associated protein homolog (Xenopus laevis)-0.59290.48
1597_atGAS6 growth arrest-specific 60.5274-0.4269
39182_atEMP3 epithelial membrane protein 30.5257-0.4255
37658_atGAS6 growth arrest-specific 60.479-0.3877
914_g_atERG v-ets erythroblastosis virus E26 oncogene like (avian)0.4539-0.3674
1958_atFIGF c-fos induced growth factor (vascular endothelial growth factor D)0.4144-0.3355
33323_r_atSFN stratifin-0.38030.3078
36446_s_atHDGF hepatoma-derived growth factor (high-mobility group protein 1-like)-0.37430.303
33322_i_atSFN stratifin-0.36690.297
1598_g_atGAS6 growth arrest-specific 60.3357-0.2717
479_atDAB2 disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)0.2983-0.2415
560_s_atTAL1 T-cell acute lymphocytic leukemia 10.2946-0.2385
33562_g_atCOL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)0.2827-0.2288
36194_atLRPAP1 low density lipoprotein receptor-related protein associated protein 10.2005-0.1623
37406_atMAPRE2 microtubule-associated protein, RP/EB family, member 20.2-0.1619
1824_s_atPCNA proliferating cell nuclear antigen-0.19550.1583
36837_atKIF2C kinesin family member 2C-0.18190.1473
33561_atCOL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)0.1626-0.1316
1507_s_atEDNRA endothelin receptor type A0.1507-0.122
38124_atMDK midkine (neurite growth-promoting factor 2)-0.14020.1135
38804_atCSE1L CSE1 chromosome segregation 1-like (yeast)-0.1370.1109
39781_atIGFBP4 insulin-like growth factor binding protein 40.1289-0.1044
577_atMDK midkine (neurite growth-promoting factor 2)-0.12640.1023
38772_atCYR61 cysteine-rich, angiogenic inducer, 610.1254-0.1015
41198_atGRN granulin0.1254-0.1015
615_s_atPTHLH parathyroid hormone-like hormone-0.12160.0984
33563_s_atCOL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)0.1193-0.0966
38299_atIL6 interleukin 6 (interferon, beta 2)0.0975-0.0789
41547_atBUB3 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)-0.08910.0721
35869_atLY86 lymphocyte antigen 860.0762-0.0616
37989_atPTHLH parathyroid hormone-like hormone-0.07380.0598
32588_s_atZFP36L2 zinc finger protein 36, C3H type-like 20.073-0.0591
38779_r_atHDGF hepatoma-derived growth factor (high-mobility group protein 1-like)-0.0570.0462
39208_i_atPPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)0.0551-0.0446
835_atPDAP1 PDGFA associated protein 1-0.04750.0385
1737_s_atIGFBP4 insulin-like growth factor binding protein 40.0363-0.0294
38775_atLRP1 low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor)0.0307-0.0249
33943_atFTH1 ferritin, heavy polypeptide 10.0221-0.0179
34561_atMS4A2 membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)0.0073-0.0059

Performance on training data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Performance on test data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Predictions

 ClassNORMALSQUAMOUSPredictionn
CL2001031606AA (testset)SQUAMOUS01 SQUAMOUS
CL2001031620AA (testset)SQUAMOUS01 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032122AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032129AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032144AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032153AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032207AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032209AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032218AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032222AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032231AA (testset)SQUAMOUS0.001190.99881 SQUAMOUS
CL2001032239AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032240AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032305AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032608AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032627AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032644AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032719AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032732AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032853AA (testset)SQUAMOUS01 SQUAMOUS
CL2001032010AA (testset)NORMAL10 NORMAL
CL2001032041AA (testset)NORMAL10 NORMAL
CL2001032043AA (testset)NORMAL10 NORMAL
CL2001032045AA (testset)NORMAL10 NORMAL
CL2001032046AA (testset)NORMAL10 NORMAL
CL2001032102AA (testset)NORMAL10 NORMAL
CL2001032128AA (testset)NORMAL10 NORMAL
CL2001032147AA (testset)NORMAL10 NORMAL
CL2001032202AA (testset)NORMAL10 NORMAL
CL2001032206AA (testset)NORMAL10 NORMAL
CL2001032220AA (testset)NORMAL10 NORMAL
CL2001032256AA (testset)NORMAL0.997860.00214 NORMAL
CL2001032304AA (testset)NORMAL10 NORMAL
CL2001032718AA (testset)NORMAL10 NORMAL
CL2001032724AA (testset)NORMAL10 NORMAL
CL2001032725AA (testset)NORMAL10 NORMAL
CL2001032727AA (testset)NORMAL10 NORMAL

 


Generated by StAM on Tue Sep 7 18:16:15 2004