GO:0007204

GO:0007204

cytosolic calcium ion concentration elevation (annotated genes)

Biological Process

Parent node

GO:0007200	G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

This leaf node contains 41 genes

The following 17 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
37983_at	AGTR1	angiotensin II receptor, type 1	0.7532	-0.6097
1507_s_at	EDNRA	endothelin receptor type A	0.5705	-0.4618
39994_at	CCR1	chemokine (C-C motif) receptor 1	0.5605	-0.4537
346_s_at	AGTR1	angiotensin II receptor, type 1	0.2828	-0.229
40330_at	PLCE1	phospholipase C, epsilon 1	0.2586	-0.2094
1128_s_at	CCR1	chemokine (C-C motif) receptor 1	0.2295	-0.1858
32068_at	C3AR1	complement component 3a receptor 1	0.2276	-0.1843
39936_at	CCR2	chemokine (C-C motif) receptor 2	0.1622	-0.1313
33602_at	EDG6	endothelial differentiation, G-protein-coupled receptor 6	0.1579	-0.1278
37149_s_at	CCR2	chemokine (C-C motif) receptor 2	-0.1533	0.1241
458_at	CCR6	chemokine (C-C motif) receptor 6	0.1474	-0.1193
33549_at	BDKRB1	bradykinin receptor B1	-0.1242	0.1006
39309_at	BDKRB2	bradykinin receptor B2	0.1149	-0.093
41104_at	CXCL13	chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)	-0.0941	0.0762
34077_at	CXCR3	chemokine (C-X-C motif) receptor 3	-0.0703	0.0569
36345_g_at	F2RL1	coagulation factor II (thrombin) receptor-like 1	-0.066	0.0534
38247_at	F2RL1	coagulation factor II (thrombin) receptor-like 1	-0.0222	0.018

Performance on training data

• Error rate: 0
• Performance: 0.07943
• Redundancy: 3.78192

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0
• Performance: 0.07943
• Redundancy: 3.89107

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA (testset)	SQUAMOUS	0.06344	0.93656	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0.00231	0.99769	SQUAMOUS
CL2001031621AA (testset)	SQUAMOUS	0.00167	0.99833	SQUAMOUS
CL2001032122AA (testset)	SQUAMOUS	0.00365	0.99635	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0.03293	0.96707	SQUAMOUS
CL2001032144AA (testset)	SQUAMOUS	0.00218	0.99782	SQUAMOUS
CL2001032153AA (testset)	SQUAMOUS	0.01382	0.98618	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.00844	0.99156	SQUAMOUS
CL2001032209AA (testset)	SQUAMOUS	0.00907	0.99093	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0.02412	0.97588	SQUAMOUS
CL2001032222AA (testset)	SQUAMOUS	0.01118	0.98882	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.16319	0.83681	SQUAMOUS
CL2001032239AA (testset)	SQUAMOUS	0.05313	0.94687	SQUAMOUS
CL2001032240AA (testset)	SQUAMOUS	0.0054	0.9946	SQUAMOUS
CL2001032305AA (testset)	SQUAMOUS	0.05649	0.94351	SQUAMOUS
CL2001032608AA (testset)	SQUAMOUS	0.00811	0.99189	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0.00656	0.99344	SQUAMOUS
CL2001032644AA (testset)	SQUAMOUS	0.00566	0.99434	SQUAMOUS
CL2001032719AA (testset)	SQUAMOUS	0.16011	0.83989	SQUAMOUS
CL2001032732AA (testset)	SQUAMOUS	0.00255	0.99745	SQUAMOUS
CL2001032853AA (testset)	SQUAMOUS	0.16497	0.83503	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.98353	0.01647	NORMAL
CL2001032041AA (testset)	NORMAL	0.99139	0.00861	NORMAL
CL2001032043AA (testset)	NORMAL	0.99671	0.00329	NORMAL
CL2001032045AA (testset)	NORMAL	0.95935	0.04065	NORMAL
CL2001032046AA (testset)	NORMAL	0.98608	0.01392	NORMAL
CL2001032102AA (testset)	NORMAL	0.99796	0.00204	NORMAL
CL2001032128AA (testset)	NORMAL	0.99568	0.00432	NORMAL
CL2001032147AA (testset)	NORMAL	0.99643	0.00357	NORMAL
CL2001032202AA (testset)	NORMAL	0.97889	0.02111	NORMAL
CL2001032206AA (testset)	NORMAL	0.97903	0.02097	NORMAL
CL2001032220AA (testset)	NORMAL	0.83988	0.16012	NORMAL
CL2001032256AA (testset)	NORMAL	0.99652	0.00348	NORMAL
CL2001032304AA (testset)	NORMAL	0.97125	0.02875	NORMAL
CL2001032718AA (testset)	NORMAL	0.98872	0.01128	NORMAL
CL2001032724AA (testset)	NORMAL	0.92476	0.07524	NORMAL
CL2001032725AA (testset)	NORMAL	0.91272	0.08728	NORMAL
CL2001032727AA (testset)	NORMAL	0.96674	0.03326	NORMAL