GO:0007154


GO:0007154

cell communication
(annotated genes)

Biological
Process

Parent node

This leaf node contains 15 genes

The following 11 of these are used in classification:

 SymbolGenenameNORMAL scoreSQUAMOUS score
40687_atGJA4 gap junction protein, alpha 4, 37kDa (connexin 37)0.9281-0.7513
41076_atGJB3 gap junction protein, beta 3, 31kDa (connexin 31)-0.66060.5348
38903_atGJB5 gap junction protein, beta 5 (connexin 31.1)-0.63810.5165
35414_s_atJAG1 jagged 1 (Alagille syndrome)-0.6330.5125
33178_atJAG1 jagged 1 (Alagille syndrome)-0.52410.4243
37474_atOIP5 Opa-interacting protein 5-0.45230.3661
357_atDNM1L dynamin 1-like-0.35350.2861
38167_atPPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4-0.0750.0607
39504_atGJA12 gap junction protein, alpha 12, 47kDa0.0519-0.042
41201_atDNM1L dynamin 1-like-0.01980.016
39505_atGJA12 gap junction protein, alpha 12, 47kDa-0.00390.0032

Performance on training data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Performance on test data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Predictions

 ClassNORMALSQUAMOUSPredictionn
CL2001031606AA (testset)SQUAMOUS0.154060.84594 SQUAMOUS
CL2001031620AA (testset)SQUAMOUS0.003160.99684 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS0.001810.99819 SQUAMOUS
CL2001032122AA (testset)SQUAMOUS0.002750.99725 SQUAMOUS
CL2001032129AA (testset)SQUAMOUS0.00360.9964 SQUAMOUS
CL2001032144AA (testset)SQUAMOUS8e-050.99992 SQUAMOUS
CL2001032153AA (testset)SQUAMOUS0.038260.96174 SQUAMOUS
CL2001032207AA (testset)SQUAMOUS0.001470.99853 SQUAMOUS
CL2001032209AA (testset)SQUAMOUS3e-050.99997 SQUAMOUS
CL2001032218AA (testset)SQUAMOUS0.000380.99962 SQUAMOUS
CL2001032222AA (testset)SQUAMOUS0.010040.98996 SQUAMOUS
CL2001032231AA (testset)SQUAMOUS0.017790.98221 SQUAMOUS
CL2001032239AA (testset)SQUAMOUS0.067450.93255 SQUAMOUS
CL2001032240AA (testset)SQUAMOUS0.005260.99474 SQUAMOUS
CL2001032305AA (testset)SQUAMOUS0.110720.88928 SQUAMOUS
CL2001032608AA (testset)SQUAMOUS0.006740.99326 SQUAMOUS
CL2001032627AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032644AA (testset)SQUAMOUS0.082020.91798 SQUAMOUS
CL2001032719AA (testset)SQUAMOUS0.000210.99979 SQUAMOUS
CL2001032732AA (testset)SQUAMOUS0.285430.71457 SQUAMOUS
CL2001032853AA (testset)SQUAMOUS0.058030.94197 SQUAMOUS
CL2001032010AA (testset)NORMAL0.969390.03061 NORMAL
CL2001032041AA (testset)NORMAL0.996750.00325 NORMAL
CL2001032043AA (testset)NORMAL0.998470.00153 NORMAL
CL2001032045AA (testset)NORMAL0.978510.02149 NORMAL
CL2001032046AA (testset)NORMAL0.993640.00636 NORMAL
CL2001032102AA (testset)NORMAL0.991420.00858 NORMAL
CL2001032128AA (testset)NORMAL0.999290.00071 NORMAL
CL2001032147AA (testset)NORMAL0.926770.07323 NORMAL
CL2001032202AA (testset)NORMAL0.997360.00264 NORMAL
CL2001032206AA (testset)NORMAL0.993310.00669 NORMAL
CL2001032220AA (testset)NORMAL0.996340.00366 NORMAL
CL2001032256AA (testset)NORMAL0.983260.01674 NORMAL
CL2001032304AA (testset)NORMAL0.997180.00282 NORMAL
CL2001032718AA (testset)NORMAL0.98820.0118 NORMAL
CL2001032724AA (testset)NORMAL0.99180.0082 NORMAL
CL2001032725AA (testset)NORMAL0.998930.00107 NORMAL
CL2001032727AA (testset)NORMAL0.991470.00853 NORMAL

 


Generated by StAM on Tue Sep 7 18:16:16 2004