GO:0006959


GO:0006959

humoral immune response
(annotated genes)

Biological
Process

Parent node

This leaf node contains 36 genes

The following 30 of these are used in classification:

 SymbolGenenameNORMAL scoreSQUAMOUS score
39122_atGPI glucose phosphate isomerase-0.84150.6812
875_g_atCCL2 chemokine (C-C motif) ligand 20.7855-0.6359
34375_atCCL2 chemokine (C-C motif) ligand 20.7428-0.6013
266_s_atCD24 CD24 antigen (small cell lung carcinoma cluster 4 antigen)-0.65810.5328
38299_atIL6 interleukin 6 (interferon, beta 2)0.6445-0.5217
35869_atLY86 lymphocyte antigen 860.6411-0.519
34561_atMS4A2 membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)0.5693-0.4609
37536_atCD83 CD83 antigen (activated B lymphocytes, immunoglobulin superfamily)0.4788-0.3876
874_atCCL2 chemokine (C-C motif) ligand 20.3686-0.2984
36239_atPOU2AF1 POU domain, class 2, associating factor 1-0.34290.2776
32675_atBST1 bone marrow stromal cell antigen 10.3243-0.2625
37417_atPOU2F2 POU domain, class 2, transcription factor 2-0.30250.2448
458_atCCR6 chemokine (C-C motif) receptor 60.2937-0.2378
38242_atBLNK B-cell linker-0.19980.1618
384_atPSMB10 proteasome (prosome, macropain) subunit, beta type, 100.1715-0.1389
39061_atBST2 bone marrow stromal cell antigen 20.1508-0.122
864_atHLXB9 homeo box HB9-0.12620.1021
37418_atPOU2F2 POU domain, class 2, transcription factor 20.111-0.0898
37419_g_atPOU2F2 POU domain, class 2, transcription factor 20.1101-0.0892
1909_atBCL2 B-cell CLL/lymphoma 2-0.08570.0694
41352_atSIAT1 sialyltransferase 1 (beta-galactoside alpha-2,6-sialyltransferase)0.0723-0.0585
386_g_atPSMB10 proteasome (prosome, macropain) subunit, beta type, 100.0633-0.0513
1847_s_atBCL2 B-cell CLL/lymphoma 2-0.05630.0456
2060_atBCL2 B-cell CLL/lymphoma 2-0.0430.0348
1910_s_atBCL2 B-cell CLL/lymphoma 2-0.04260.0345
41630_atIL7 interleukin 70.0386-0.0312
385_atPSMB10 proteasome (prosome, macropain) subunit, beta type, 100.0252-0.0204
2038_g_atBCL2 B-cell CLL/lymphoma 2-0.020.0162
37396_atRFXANK regulatory factor X-associated ankyrin-containing protein-0.01850.015
33553_r_atCCR6 chemokine (C-C motif) receptor 60.008-0.0065

Performance on training data

 SensitivitySpecificity
NORMAL0.941181
SQUAMOUS10.94118

Performance on test data

 SensitivitySpecificity
NORMAL0.941181
SQUAMOUS10.94118

Predictions

 ClassNORMALSQUAMOUSPredictionn
CL2001031606AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001031620AA (testset)SQUAMOUS0.000140.99986 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS0.000460.99954 SQUAMOUS
CL2001032122AA (testset)SQUAMOUS3e-050.99997 SQUAMOUS
CL2001032129AA (testset)SQUAMOUS0.000270.99973 SQUAMOUS
CL2001032144AA (testset)SQUAMOUS7e-050.99993 SQUAMOUS
CL2001032153AA (testset)SQUAMOUS0.000350.99965 SQUAMOUS
CL2001032207AA (testset)SQUAMOUS0.0060.994 SQUAMOUS
CL2001032209AA (testset)SQUAMOUS0.010430.98957 SQUAMOUS
CL2001032218AA (testset)SQUAMOUS0.000230.99977 SQUAMOUS
CL2001032222AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032231AA (testset)SQUAMOUS0.003150.99685 SQUAMOUS
CL2001032239AA (testset)SQUAMOUS0.001690.99831 SQUAMOUS
CL2001032240AA (testset)SQUAMOUS0.000110.99989 SQUAMOUS
CL2001032305AA (testset)SQUAMOUS0.001450.99855 SQUAMOUS
CL2001032608AA (testset)SQUAMOUS0.000150.99985 SQUAMOUS
CL2001032627AA (testset)SQUAMOUS0.000390.99961 SQUAMOUS
CL2001032644AA (testset)SQUAMOUS0.001950.99805 SQUAMOUS
CL2001032719AA (testset)SQUAMOUS0.000770.99923 SQUAMOUS
CL2001032732AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032853AA (testset)SQUAMOUS0.000720.99928 SQUAMOUS
CL2001032010AA (testset)NORMAL0.99982e-04 NORMAL
CL2001032041AA (testset)NORMAL0.999973e-05 NORMAL
CL2001032043AA (testset)NORMAL0.994090.00591 NORMAL
CL2001032045AA (testset)NORMAL0.986520.01348 NORMAL
CL2001032046AA (testset)NORMAL0.990920.00908 NORMAL
CL2001032102AA (testset)NORMAL0.999982e-05 NORMAL
CL2001032128AA (testset)NORMAL0.999964e-05 NORMAL
CL2001032147AA (testset)NORMAL0.999710.00029 NORMAL
CL2001032202AA (testset)NORMAL0.999540.00046 NORMAL
CL2001032206AA (testset)NORMAL10 NORMAL
CL2001032220AA (testset)NORMAL0.999946e-05 NORMAL
CL2001032256AA (testset)NORMAL0.999790.00021 NORMAL
CL2001032304AA (testset)NORMAL0.998540.00146 NORMAL
CL2001032718AA (testset)NORMAL0.99310.0069 NORMAL
CL2001032724AA (testset)NORMAL0.904590.09541 NORMAL
CL2001032725AA (testset)NORMAL0.299670.70033 SQUAMOUS
CL2001032727AA (testset)NORMAL10 NORMAL

 


Generated by StAM on Tue Sep 7 18:16:07 2004