GO:0006935


GO:0006935

chemotaxis
(annotated genes)

Biological
Process

Parent node

This leaf node contains 109 genes

The following 32 of these are used in classification:

 SymbolGenenameNORMAL scoreSQUAMOUS score
33158_atKAL1 Kallmann syndrome 1 sequence0.6171-0.4995
37187_atCXCL2 chemokine (C-X-C motif) ligand 20.5687-0.4604
875_g_atCCL2 chemokine (C-C motif) ligand 20.5075-0.4108
34375_atCCL2 chemokine (C-C motif) ligand 20.4636-0.3753
39994_atCCR1 chemokine (C-C motif) receptor 10.4173-0.3378
41123_s_atENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)0.409-0.3311
38772_atCYR61 cysteine-rich, angiogenic inducer, 610.3981-0.3222
39208_i_atPPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)0.3246-0.2628
41124_r_atENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)0.3141-0.2542
37095_r_atFPRL1 formyl peptide receptor-like 10.2952-0.2389
40646_atCX3CR1 chemokine (C-X3-C motif) receptor 10.2866-0.232
1590_s_atHRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog-0.27070.2192
32666_atCXCL12 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)0.2672-0.2163
36798_g_atSPN sialophorin (gpL115, leukosialin, CD43)0.26-0.2105
37310_atPLAU plasminogen activator, urokinase-0.21910.1773
36503_atCCL21 chemokine (C-C motif) ligand 210.1971-0.1595
1353_g_atIL8RA interleukin 8 receptor, alpha0.1868-0.1512
37816_atC5 complement component 50.1703-0.1378
32128_atCCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)0.1614-0.1307
35701_atHRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog-0.13450.1089
37454_atCCL13 chemokine (C-C motif) ligand 130.1212-0.0981
40599_atIL16 interleukin 16 (lymphocyte chemoattractant factor)0.0933-0.0755
32068_atC3AR1 complement component 3a receptor 10.0861-0.0697
1128_s_atCCR1 chemokine (C-C motif) receptor 10.0819-0.0663
874_atCCL2 chemokine (C-C motif) ligand 20.0816-0.066
37149_s_atCCR2 chemokine (C-C motif) receptor 2-0.0530.0429
39936_atCCR2 chemokine (C-C motif) receptor 20.023-0.0186
189_s_atPLAUR plasminogen activator, urokinase receptor0.0205-0.0166
36674_atCCL4 chemokine (C-C motif) ligand 40.0179-0.0145
823_atCX3CL1 chemokine (C-X3-C motif) ligand 10.0115-0.0093
458_atCCR6 chemokine (C-C motif) receptor 60.0091-0.0074
1056_s_atIL16 interleukin 16 (lymphocyte chemoattractant factor)0.0028-0.0023

Performance on training data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Performance on test data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Predictions

 ClassNORMALSQUAMOUSPredictionn
CL2001031606AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001031620AA (testset)SQUAMOUS0.000490.99951 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS0.002110.99789 SQUAMOUS
CL2001032122AA (testset)SQUAMOUS4e-050.99996 SQUAMOUS
CL2001032129AA (testset)SQUAMOUS0.000230.99977 SQUAMOUS
CL2001032144AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032153AA (testset)SQUAMOUS0.00350.9965 SQUAMOUS
CL2001032207AA (testset)SQUAMOUS0.001640.99836 SQUAMOUS
CL2001032209AA (testset)SQUAMOUS0.000840.99916 SQUAMOUS
CL2001032218AA (testset)SQUAMOUS0.000160.99984 SQUAMOUS
CL2001032222AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032231AA (testset)SQUAMOUS0.021910.97809 SQUAMOUS
CL2001032239AA (testset)SQUAMOUS0.079170.92083 SQUAMOUS
CL2001032240AA (testset)SQUAMOUS0.000190.99981 SQUAMOUS
CL2001032305AA (testset)SQUAMOUS0.003250.99675 SQUAMOUS
CL2001032608AA (testset)SQUAMOUS0.000750.99925 SQUAMOUS
CL2001032627AA (testset)SQUAMOUS1e-050.99999 SQUAMOUS
CL2001032644AA (testset)SQUAMOUS0.003040.99696 SQUAMOUS
CL2001032719AA (testset)SQUAMOUS0.014080.98592 SQUAMOUS
CL2001032732AA (testset)SQUAMOUS3e-050.99997 SQUAMOUS
CL2001032853AA (testset)SQUAMOUS0.003770.99623 SQUAMOUS
CL2001032010AA (testset)NORMAL0.999620.00038 NORMAL
CL2001032041AA (testset)NORMAL0.999720.00028 NORMAL
CL2001032043AA (testset)NORMAL0.996380.00362 NORMAL
CL2001032045AA (testset)NORMAL0.843960.15604 NORMAL
CL2001032046AA (testset)NORMAL0.998950.00105 NORMAL
CL2001032102AA (testset)NORMAL0.999630.00037 NORMAL
CL2001032128AA (testset)NORMAL0.999928e-05 NORMAL
CL2001032147AA (testset)NORMAL0.999982e-05 NORMAL
CL2001032202AA (testset)NORMAL0.999720.00028 NORMAL
CL2001032206AA (testset)NORMAL10 NORMAL
CL2001032220AA (testset)NORMAL0.99860.0014 NORMAL
CL2001032256AA (testset)NORMAL10 NORMAL
CL2001032304AA (testset)NORMAL0.999840.00016 NORMAL
CL2001032718AA (testset)NORMAL0.999982e-05 NORMAL
CL2001032724AA (testset)NORMAL0.896940.10306 NORMAL
CL2001032725AA (testset)NORMAL0.781620.21838 NORMAL
CL2001032727AA (testset)NORMAL10 NORMAL

 


Generated by StAM on Tue Sep 7 18:16:08 2004