GO:0006915

GO:0006915

apoptosis (annotated genes)

Biological Process

Parent node

GO:0006915	apoptosis

This leaf node contains 200 genes

The following 18 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
31791_at	TP73L	tumor protein p73-like	-0.5756	0.466
40926_at	BCAP31	B-cell receptor-associated protein 31	-0.5212	0.422
1461_at	NFKBIA	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.3814	-0.3088
35832_at	SULF1	sulfatase 1	-0.3299	0.2671
40049_at	DAPK1	death-associated protein kinase 1	0.2732	-0.2211
1558_g_at	PAK1	p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)	-0.2051	0.1661
37543_at	ARHGEF6	Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.1749	-0.1416
38158_at	ESPL1	extra spindle poles like 1 (S. cerevisiae)	-0.1422	0.1151
41193_at	DUSP6	dual specificity phosphatase 6	0.126	-0.102
37028_at	PPP1R15A	protein phosphatase 1, regulatory (inhibitor) subunit 15A	0.1185	-0.0959
41763_g_at	TIAL1	TIA1 cytotoxic granule-associated RNA binding protein-like 1	-0.093	0.0753
33357_at	NCKAP1	NCK-associated protein 1	-0.0841	0.0681
1557_at	PAK1	p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)	-0.0612	0.0496
1998_i_at	BAX	BCL2-associated X protein	0.0521	-0.0422
33813_at	TNFRSF1B	tumor necrosis factor receptor superfamily, member 1B	0.0306	-0.0248
38804_at	CSE1L	CSE1 chromosome segregation 1-like (yeast)	-0.0298	0.0241
34912_at	DAPK2	death-associated protein kinase 2	0.0181	-0.0146
33390_at	STK17B	serine/threonine kinase 17b (apoptosis-inducing)	0.0146	-0.0118

Performance on training data

• Error rate: 0
• Performance: 0.04486
• Redundancy: 4.69346

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0
• Performance: 0.04486
• Redundancy: 4.81842

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA (testset)	SQUAMOUS	0.02964	0.97036	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0.00305	0.99695	SQUAMOUS
CL2001031621AA (testset)	SQUAMOUS	0.00178	0.99822	SQUAMOUS
CL2001032122AA (testset)	SQUAMOUS	0.01279	0.98721	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0.00304	0.99696	SQUAMOUS
CL2001032144AA (testset)	SQUAMOUS	0.00429	0.99571	SQUAMOUS
CL2001032153AA (testset)	SQUAMOUS	0.01282	0.98718	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.00159	0.99841	SQUAMOUS
CL2001032209AA (testset)	SQUAMOUS	0.00032	0.99968	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0.00313	0.99687	SQUAMOUS
CL2001032222AA (testset)	SQUAMOUS	0.01864	0.98136	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.0718	0.9282	SQUAMOUS
CL2001032239AA (testset)	SQUAMOUS	0.02554	0.97446	SQUAMOUS
CL2001032240AA (testset)	SQUAMOUS	0.00204	0.99796	SQUAMOUS
CL2001032305AA (testset)	SQUAMOUS	0.02573	0.97427	SQUAMOUS
CL2001032608AA (testset)	SQUAMOUS	0.00063	0.99937	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0.00011	0.99989	SQUAMOUS
CL2001032644AA (testset)	SQUAMOUS	0.00125	0.99875	SQUAMOUS
CL2001032719AA (testset)	SQUAMOUS	0.03541	0.96459	SQUAMOUS
CL2001032732AA (testset)	SQUAMOUS	0.22227	0.77773	SQUAMOUS
CL2001032853AA (testset)	SQUAMOUS	0.00021	0.99979	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.99199	0.00801	NORMAL
CL2001032041AA (testset)	NORMAL	0.9983	0.0017	NORMAL
CL2001032043AA (testset)	NORMAL	0.99852	0.00148	NORMAL
CL2001032045AA (testset)	NORMAL	0.99309	0.00691	NORMAL
CL2001032046AA (testset)	NORMAL	0.99823	0.00177	NORMAL
CL2001032102AA (testset)	NORMAL	0.99846	0.00154	NORMAL
CL2001032128AA (testset)	NORMAL	0.99559	0.00441	NORMAL
CL2001032147AA (testset)	NORMAL	0.99756	0.00244	NORMAL
CL2001032202AA (testset)	NORMAL	0.99849	0.00151	NORMAL
CL2001032206AA (testset)	NORMAL	0.99609	0.00391	NORMAL
CL2001032220AA (testset)	NORMAL	0.99872	0.00128	NORMAL
CL2001032256AA (testset)	NORMAL	0.98844	0.01156	NORMAL
CL2001032304AA (testset)	NORMAL	0.96993	0.03007	NORMAL
CL2001032718AA (testset)	NORMAL	0.99805	0.00195	NORMAL
CL2001032724AA (testset)	NORMAL	0.98746	0.01254	NORMAL
CL2001032725AA (testset)	NORMAL	0.99553	0.00447	NORMAL
CL2001032727AA (testset)	NORMAL	0.99934	0.00066	NORMAL