GO:0000074 | regulation of cell cycle | Biological Process |
| GO:0000074 | regulation of cell cycle |
|---|
The following 27 of these are used in classification:
| Symbol | Genename | NORMAL score | SQUAMOUS score | |
|---|---|---|---|---|
| 1884_s_at | PCNA | proliferating cell nuclear antigen | -0.5865 | 0.4748 |
| 32263_at | CCNB2 | cyclin B2 | -0.477 | 0.3861 |
| 38708_at | RAN | RAN, member RAS oncogene family | -0.4018 | 0.3253 |
| 1958_at | FIGF | c-fos induced growth factor (vascular endothelial growth factor D) | 0.2575 | -0.2084 |
| 1257_s_at | QSCN6 | quiescin Q6 | 0.2538 | -0.2054 |
| 33323_r_at | SFN | stratifin | -0.2511 | 0.2033 |
| 1795_g_at | CCND3 | cyclin D3 | 0.2429 | -0.1966 |
| 1840_g_at | RAN | RAN, member RAS oncogene family | -0.2387 | 0.1932 |
| 33322_i_at | SFN | stratifin | -0.2386 | 0.1932 |
| 1794_at | CCND3 | cyclin D3 | 0.2371 | -0.1919 |
| 1942_s_at | CDK4 | cyclin-dependent kinase 4 | -0.2368 | 0.1917 |
| 1839_at | RAN | RAN, member RAS oncogene family | -0.221 | 0.1789 |
| 32530_at | YWHAQ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide | -0.183 | 0.1481 |
| 1945_at | CCNB1 | cyclin B1 | -0.1744 | 0.1412 |
| 1854_at | MYBL2 | v-myb myeloblastosis viral oncogene homolog (avian)-like 2 | -0.1178 | 0.0954 |
| 34736_at | CCNB1 | cyclin B1 | -0.1173 | 0.0949 |
| 40575_at | DLG5 | discs, large homolog 5 (Drosophila) | -0.1043 | 0.0844 |
| 38158_at | ESPL1 | extra spindle poles like 1 (S. cerevisiae) | -0.1016 | 0.0822 |
| 41193_at | DUSP6 | dual specificity phosphatase 6 | 0.1009 | -0.0817 |
| 409_at | YWHAQ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide | -0.0993 | 0.0804 |
| 982_at | MCM5 | MCM5 minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) | -0.0851 | 0.0689 |
| 38326_at | G0S2 | putative lymphocyte G0/G1 switch gene | 0.0773 | -0.0625 |
| 1824_s_at | PCNA | proliferating cell nuclear antigen | -0.0517 | 0.0418 |
| 37574_at | NEDD9 | neural precursor cell expressed, developmentally down-regulated 9 | 0.039 | -0.0316 |
| 37228_at | PLK1 | polo-like kinase 1 (Drosophila) | -0.02 | 0.0162 |
| 38124_at | MDK | midkine (neurite growth-promoting factor 2) | -0.0091 | 0.0074 |
| 35759_at | CCT2 | chaperonin containing TCP1, subunit 2 (beta) | -0.0057 | 0.0046 |
| Sensitivity | Specificity | |
|---|---|---|
| NORMAL | 1 | 1 |
| SQUAMOUS | 1 | 1 |
| Sensitivity | Specificity | |
|---|---|---|
| NORMAL | 1 | 1 |
| SQUAMOUS | 1 | 1 |
| Class | NORMAL | SQUAMOUS | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 3e-05 | 0.99997 | SQUAMOUS |
| CL2001031620AA (testset) | SQUAMOUS | 0.00038 | 0.99962 | SQUAMOUS |
| CL2001031621AA (testset) | SQUAMOUS | 1e-05 | 0.99999 | SQUAMOUS |
| CL2001032122AA (testset) | SQUAMOUS | 0.00056 | 0.99944 | SQUAMOUS |
| CL2001032129AA (testset) | SQUAMOUS | 0.00012 | 0.99988 | SQUAMOUS |
| CL2001032144AA (testset) | SQUAMOUS | 0.00026 | 0.99974 | SQUAMOUS |
| CL2001032153AA (testset) | SQUAMOUS | 0.02337 | 0.97663 | SQUAMOUS |
| CL2001032207AA (testset) | SQUAMOUS | 7e-05 | 0.99993 | SQUAMOUS |
| CL2001032209AA (testset) | SQUAMOUS | 0 | 1 | SQUAMOUS |
| CL2001032218AA (testset) | SQUAMOUS | 0.00662 | 0.99338 | SQUAMOUS |
| CL2001032222AA (testset) | SQUAMOUS | 1e-05 | 0.99999 | SQUAMOUS |
| CL2001032231AA (testset) | SQUAMOUS | 0.34409 | 0.65591 | SQUAMOUS |
| CL2001032239AA (testset) | SQUAMOUS | 6e-05 | 0.99994 | SQUAMOUS |
| CL2001032240AA (testset) | SQUAMOUS | 0.00186 | 0.99814 | SQUAMOUS |
| CL2001032305AA (testset) | SQUAMOUS | 0.0048 | 0.9952 | SQUAMOUS |
| CL2001032608AA (testset) | SQUAMOUS | 0.03167 | 0.96833 | SQUAMOUS |
| CL2001032627AA (testset) | SQUAMOUS | 2e-05 | 0.99998 | SQUAMOUS |
| CL2001032644AA (testset) | SQUAMOUS | 0.00049 | 0.99951 | SQUAMOUS |
| CL2001032719AA (testset) | SQUAMOUS | 2e-05 | 0.99998 | SQUAMOUS |
| CL2001032732AA (testset) | SQUAMOUS | 0.00693 | 0.99307 | SQUAMOUS |
| CL2001032853AA (testset) | SQUAMOUS | 0.00888 | 0.99112 | SQUAMOUS |
| CL2001032010AA (testset) | NORMAL | 0.99937 | 0.00063 | NORMAL |
| CL2001032041AA (testset) | NORMAL | 0.99966 | 0.00034 | NORMAL |
| CL2001032043AA (testset) | NORMAL | 0.9999 | 1e-04 | NORMAL |
| CL2001032045AA (testset) | NORMAL | 0.99996 | 4e-05 | NORMAL |
| CL2001032046AA (testset) | NORMAL | 0.99998 | 2e-05 | NORMAL |
| CL2001032102AA (testset) | NORMAL | 0.99997 | 3e-05 | NORMAL |
| CL2001032128AA (testset) | NORMAL | 0.99972 | 0.00028 | NORMAL |
| CL2001032147AA (testset) | NORMAL | 0.99973 | 0.00027 | NORMAL |
| CL2001032202AA (testset) | NORMAL | 0.99993 | 7e-05 | NORMAL |
| CL2001032206AA (testset) | NORMAL | 0.99943 | 0.00057 | NORMAL |
| CL2001032220AA (testset) | NORMAL | 0.99998 | 2e-05 | NORMAL |
| CL2001032256AA (testset) | NORMAL | 0.93661 | 0.06339 | NORMAL |
| CL2001032304AA (testset) | NORMAL | 0.98148 | 0.01852 | NORMAL |
| CL2001032718AA (testset) | NORMAL | 0.9991 | 9e-04 | NORMAL |
| CL2001032724AA (testset) | NORMAL | 0.99989 | 0.00011 | NORMAL |
| CL2001032725AA (testset) | NORMAL | 0.99999 | 1e-05 | NORMAL |
| CL2001032727AA (testset) | NORMAL | 0.99998 | 2e-05 | NORMAL |