GO:0000004

GO:0000004

biological_process unknown (annotated genes)

Biological Process

Parent node

GO:0008150	biological_process

This leaf node contains 525 genes

The following 19 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
38404_at	TGM2	transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)	0.8199	-0.6637
2027_at	S100A2	S100 calcium binding protein A2	-0.5287	0.428
35726_at	S100A2	S100 calcium binding protein A2	-0.5052	0.409
39634_at	SLIT2	slit homolog 2 (Drosophila)	0.386	-0.3125
32527_at	APM2	adipose specific 2	0.3831	-0.3102
38704_at	MACF1	microtubule-actin crosslinking factor 1	0.3548	-0.2872
36987_at	LMNB2	lamin B2	-0.2606	0.211
39345_at	NPC2	Niemann-Pick disease, type C2	0.2247	-0.1819
32971_at	C9orf61	chromosome 9 open reading frame 61	0.1651	-0.1336
231_at	TGM2	transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)	0.1541	-0.1247
37026_at	COPEB	core promoter element binding protein	0.1137	-0.092
39220_at	SCGB1A1	secretoglobin, family 1A, member 1 (uteroglobin)	0.1136	-0.0919
38744_at	SHFM1	split hand/foot malformation (ectrodactyly) type 1	-0.1054	0.0853
35704_at	HRASLS3	HRAS-like suppressor 3	0.0536	-0.0434
41868_at	GGT1	gamma-glutamyltransferase 1	0.0518	-0.0419
35844_at	SDC4	syndecan 4 (amphiglycan, ryudocan)	0.0354	-0.0286
1252_at	DP1	polyposis locus protein 1	0.0341	-0.0276
38729_at	FKBP4	FK506 binding protein 4, 59kDa	-0.007	0.0056
39081_at	MT1E	metallothionein 1E (functional)	0.0062	-0.005

Performance on training data

• Error rate: 0
• Performance: 0.00345
• Redundancy: 6.36258

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0
• Performance: 0.00345
• Redundancy: 6.51318

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA (testset)	SQUAMOUS	6e-04	0.9994	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	7e-05	0.99993	SQUAMOUS
CL2001031621AA (testset)	SQUAMOUS	4e-05	0.99996	SQUAMOUS
CL2001032122AA (testset)	SQUAMOUS	1e-05	0.99999	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	5e-05	0.99995	SQUAMOUS
CL2001032144AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001032153AA (testset)	SQUAMOUS	0.01092	0.98908	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.00012	0.99988	SQUAMOUS
CL2001032209AA (testset)	SQUAMOUS	3e-04	0.9997	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	1e-05	0.99999	SQUAMOUS
CL2001032222AA (testset)	SQUAMOUS	7e-05	0.99993	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.00446	0.99554	SQUAMOUS
CL2001032239AA (testset)	SQUAMOUS	0.01828	0.98172	SQUAMOUS
CL2001032240AA (testset)	SQUAMOUS	0.00015	0.99985	SQUAMOUS
CL2001032305AA (testset)	SQUAMOUS	0.0012	0.9988	SQUAMOUS
CL2001032608AA (testset)	SQUAMOUS	4e-05	0.99996	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	2e-05	0.99998	SQUAMOUS
CL2001032644AA (testset)	SQUAMOUS	1e-05	0.99999	SQUAMOUS
CL2001032719AA (testset)	SQUAMOUS	0.00186	0.99814	SQUAMOUS
CL2001032732AA (testset)	SQUAMOUS	5e-04	0.9995	SQUAMOUS
CL2001032853AA (testset)	SQUAMOUS	0.00029	0.99971	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.99784	0.00216	NORMAL
CL2001032041AA (testset)	NORMAL	0.99999	1e-05	NORMAL
CL2001032043AA (testset)	NORMAL	1	0	NORMAL
CL2001032045AA (testset)	NORMAL	0.9989	0.0011	NORMAL
CL2001032046AA (testset)	NORMAL	0.99966	0.00034	NORMAL
CL2001032102AA (testset)	NORMAL	0.99999	1e-05	NORMAL
CL2001032128AA (testset)	NORMAL	0.99996	4e-05	NORMAL
CL2001032147AA (testset)	NORMAL	0.99996	4e-05	NORMAL
CL2001032202AA (testset)	NORMAL	1	0	NORMAL
CL2001032206AA (testset)	NORMAL	0.99982	0.00018	NORMAL
CL2001032220AA (testset)	NORMAL	1	0	NORMAL
CL2001032256AA (testset)	NORMAL	0.99983	0.00017	NORMAL
CL2001032304AA (testset)	NORMAL	0.99965	0.00035	NORMAL
CL2001032718AA (testset)	NORMAL	0.99999	1e-05	NORMAL
CL2001032724AA (testset)	NORMAL	0.99743	0.00257	NORMAL
CL2001032725AA (testset)	NORMAL	0.99997	3e-05	NORMAL
CL2001032727AA (testset)	NORMAL	0.99981	0.00019	NORMAL