GO:0007585

GO:0007585

respiratory gaseous exchange (annotated genes)

Biological Process

Parent node

GO:0007582	physiological process

This leaf node contains 20 genes

The following 19 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
38691_s_at	SFTPC	surfactant, pulmonary-associated protein C	1.6867	-1.3253
31775_at	SFTPD	surfactant, pulmonary-associated protein D	1.6553	-1.3006
33383_f_at	SFTPB	surfactant, pulmonary-associated protein B	1.3094	-1.0288
37004_at	SFTPB	surfactant, pulmonary-associated protein B	1.2638	-0.993
37493_at	CSF2RB	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.7456	-0.5859
39921_at	COX5B	cytochrome c oxidase subunit Vb	-0.7018	0.5514
39443_s_at	COX5B	cytochrome c oxidase subunit Vb	-0.6217	0.4885
336_at	TBXA2R	thromboxane A2 receptor	0.3154	-0.2478
36816_s_at	CFTR	cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)	0.2598	-0.2041
31345_at	HAT	airway trypsin-like protease	-0.2329	0.183
37604_at	HNMT	histamine N-methyltransferase	0.1952	-0.1534
34422_r_at	UCP3	uncoupling protein 3 (mitochondrial, proton carrier)	0.1733	-0.1361
34420_at	UCP3	uncoupling protein 3 (mitochondrial, proton carrier)	0.1297	-0.1019
34723_at	COX11	COX11 homolog, cytochrome c oxidase assembly protein (yeast)	-0.1139	0.0895
37494_at	CSF2RB	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.0774	-0.0608
36817_at	CFTR	cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)	0.0699	-0.0549
1086_at	CSF2RB	colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.0338	-0.0266
31331_at	SPAR	surfactant protein A binding protein	0.0093	-0.0073
34421_g_at	UCP3	uncoupling protein 3 (mitochondrial, proton carrier)	0.0084	-0.0066

Performance on training data

• Error rate: 0
• Performance: 0.02102
• Redundancy: 5.82805

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0.07692
• Performance: 1.00481
• Redundancy: 4.82814

	Sensitivity	Specificity
NORMAL	1	0.85714
SQUAMOUS	0.85714	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA	SQUAMOUS	0	1	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001031621AA	SQUAMOUS	0.0035	0.9965	SQUAMOUS
CL2001032122AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001032144AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032153AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.03681	0.96319	SQUAMOUS
CL2001032209AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001032222AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.99806	0.00194	NORMAL
CL2001032239AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001032240AA	SQUAMOUS	0.22793	0.77207	SQUAMOUS
CL2001032305AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032608AA	SQUAMOUS	8e-05	0.99992	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0	1	SQUAMOUS
CL2001032644AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032719AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032732AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032853AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032010AA (testset)	NORMAL	1	0	NORMAL
CL2001032041AA	NORMAL	1	0	NORMAL
CL2001032043AA	NORMAL	1	0	NORMAL
CL2001032045AA (testset)	NORMAL	1	0	NORMAL
CL2001032046AA	NORMAL	1	0	NORMAL
CL2001032102AA	NORMAL	1	0	NORMAL
CL2001032128AA (testset)	NORMAL	1	0	NORMAL
CL2001032147AA	NORMAL	1	0	NORMAL
CL2001032202AA (testset)	NORMAL	1	0	NORMAL
CL2001032206AA	NORMAL	1	0	NORMAL
CL2001032220AA	NORMAL	1	0	NORMAL
CL2001032256AA	NORMAL	0.9995	5e-04	NORMAL
CL2001032304AA	NORMAL	1	0	NORMAL
CL2001032718AA	NORMAL	1	0	NORMAL
CL2001032724AA (testset)	NORMAL	1	0	NORMAL
CL2001032725AA	NORMAL	1	0	NORMAL
CL2001032727AA (testset)	NORMAL	1	0	NORMAL