GO:0006869

GO:0006869

lipid transport (annotated genes)

Biological Process

Parent node

GO:0006869	lipid transport

This leaf node contains 39 genes

The following 8 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
37919_at	SLCO2A1	solute carrier organic anion transporter family, member 2A1	1.0128	-0.7958
32855_at	LDLR	low density lipoprotein receptor (familial hypercholesterolemia)	0.3759	-0.2953
41362_at	ABCG1	ATP-binding cassette, sub-family G (WHITE), member 1	0.2591	-0.2035
32398_s_at	LRP8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	-0.2132	0.1675
36795_at	PSAP	prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)	0.1118	-0.0878
41764_at	APOC1	apolipoprotein C-I	0.0538	-0.0423
40012_at	LRP8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	-0.0423	0.0332
40598_at	STARD5	START domain containing 5	-0.0134	0.0105

Performance on training data

• Error rate: 0
• Performance: 0.09341
• Redundancy: 3.22168

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0.15385
• Performance: 1.27992
• Redundancy: 2.30505

	Sensitivity	Specificity
NORMAL	1	0.71429
SQUAMOUS	0.71429	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA	SQUAMOUS	0.0039	0.9961	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0.78981	0.21019	NORMAL
CL2001031621AA	SQUAMOUS	0.06047	0.93953	SQUAMOUS
CL2001032122AA	SQUAMOUS	0.06784	0.93216	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0.10488	0.89512	SQUAMOUS
CL2001032144AA	SQUAMOUS	0.01953	0.98047	SQUAMOUS
CL2001032153AA	SQUAMOUS	0.04638	0.95362	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.00979	0.99021	SQUAMOUS
CL2001032209AA	SQUAMOUS	0.02151	0.97849	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0.05291	0.94709	SQUAMOUS
CL2001032222AA	SQUAMOUS	0.02223	0.97777	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.14596	0.85404	SQUAMOUS
CL2001032239AA (testset)	SQUAMOUS	0.99606	0.00394	NORMAL
CL2001032240AA	SQUAMOUS	0.01868	0.98132	SQUAMOUS
CL2001032305AA	SQUAMOUS	0.01223	0.98777	SQUAMOUS
CL2001032608AA	SQUAMOUS	0.03867	0.96133	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0.05209	0.94791	SQUAMOUS
CL2001032644AA	SQUAMOUS	0.05406	0.94594	SQUAMOUS
CL2001032719AA	SQUAMOUS	0.06468	0.93532	SQUAMOUS
CL2001032732AA	SQUAMOUS	0.006	0.994	SQUAMOUS
CL2001032853AA	SQUAMOUS	0.03518	0.96482	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.96461	0.03539	NORMAL
CL2001032041AA	NORMAL	0.87273	0.12727	NORMAL
CL2001032043AA	NORMAL	0.98417	0.01583	NORMAL
CL2001032045AA (testset)	NORMAL	0.81188	0.18812	NORMAL
CL2001032046AA	NORMAL	0.71407	0.28593	NORMAL
CL2001032102AA	NORMAL	0.99554	0.00446	NORMAL
CL2001032128AA (testset)	NORMAL	0.93898	0.06102	NORMAL
CL2001032147AA	NORMAL	0.9915	0.0085	NORMAL
CL2001032202AA (testset)	NORMAL	0.99256	0.00744	NORMAL
CL2001032206AA	NORMAL	0.96046	0.03954	NORMAL
CL2001032220AA	NORMAL	0.98353	0.01647	NORMAL
CL2001032256AA	NORMAL	0.98521	0.01479	NORMAL
CL2001032304AA	NORMAL	0.94136	0.05864	NORMAL
CL2001032718AA	NORMAL	0.97803	0.02197	NORMAL
CL2001032724AA (testset)	NORMAL	0.7952	0.2048	NORMAL
CL2001032725AA	NORMAL	0.97205	0.02795	NORMAL
CL2001032727AA (testset)	NORMAL	0.98078	0.01922	NORMAL