GO:0006812

GO:0006812

cation transport (annotated genes)

Biological Process

Parent node

GO:0006812	cation transport

This leaf node contains 107 genes

The following 15 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
33267_at	ATP8A1	ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1	0.7497	-0.589
755_at	ITPR1	inositol 1,4,5-triphosphate receptor, type 1	0.4318	-0.3393
36365_at	TRPC6	transient receptor potential cation channel, subfamily C, member 6	0.3445	-0.2706
32778_at	ITPR1	inositol 1,4,5-triphosphate receptor, type 1	0.3376	-0.2653
34857_at	AFURS1	ATPase family homolog up-regulated in senescence cells	-0.2779	0.2184
40913_at	ATP2B4	ATPase, Ca++ transporting, plasma membrane 4	0.2268	-0.1782
36635_at	ATP11B	ATPase, Class VI, type 11B	-0.2262	0.1777
40914_s_at	ATP2B4	ATPase, Ca++ transporting, plasma membrane 4	0.1337	-0.1051
40527_at	KCNQ1	potassium voltage-gated channel, KQT-like subfamily, member 1	0.1329	-0.1044
38684_at	ATP2C1	ATPase, Ca++ transporting, type 2C, member 1	-0.1208	0.0949
39124_r_at	TRPC1	transient receptor potential cation channel, subfamily C, member 1	0.1169	-0.0918
39276_g_at	CACNA1D	calcium channel, voltage-dependent, L type, alpha 1D subunit	0.1104	-0.0867
39275_at	CACNA1D	calcium channel, voltage-dependent, L type, alpha 1D subunit	0.064	-0.0503
33634_at	ATP8B1	ATPase, Class I, type 8B, member 1	-0.0464	0.0364
34981_at	KCNA5	potassium voltage-gated channel, shaker-related subfamily, member 5	0.0125	-0.0098

Performance on training data

• Error rate: 0
• Performance: 0.07604
• Redundancy: 3.59505

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0.07692
• Performance: 0.16413
• Redundancy: 3.19012

	Sensitivity	Specificity
NORMAL	1	0.85714
SQUAMOUS	0.85714	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA	SQUAMOUS	0.002	0.998	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0.03332	0.96668	SQUAMOUS
CL2001031621AA	SQUAMOUS	0.0118	0.9882	SQUAMOUS
CL2001032122AA	SQUAMOUS	0.08958	0.91042	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0.0328	0.9672	SQUAMOUS
CL2001032144AA	SQUAMOUS	0.08558	0.91442	SQUAMOUS
CL2001032153AA	SQUAMOUS	0.00595	0.99405	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.02068	0.97932	SQUAMOUS
CL2001032209AA	SQUAMOUS	0.00289	0.99711	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0.04519	0.95481	SQUAMOUS
CL2001032222AA	SQUAMOUS	0.00581	0.99419	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.50587	0.49413	NORMAL
CL2001032239AA (testset)	SQUAMOUS	0.01788	0.98212	SQUAMOUS
CL2001032240AA	SQUAMOUS	0.00509	0.99491	SQUAMOUS
CL2001032305AA	SQUAMOUS	0.04046	0.95954	SQUAMOUS
CL2001032608AA	SQUAMOUS	0.09625	0.90375	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0.00743	0.99257	SQUAMOUS
CL2001032644AA	SQUAMOUS	0.03184	0.96816	SQUAMOUS
CL2001032719AA	SQUAMOUS	0.16124	0.83876	SQUAMOUS
CL2001032732AA	SQUAMOUS	0.00511	0.99489	SQUAMOUS
CL2001032853AA	SQUAMOUS	0.01092	0.98908	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.88905	0.11095	NORMAL
CL2001032041AA	NORMAL	0.9828	0.0172	NORMAL
CL2001032043AA	NORMAL	0.99648	0.00352	NORMAL
CL2001032045AA (testset)	NORMAL	0.9814	0.0186	NORMAL
CL2001032046AA	NORMAL	0.98855	0.01145	NORMAL
CL2001032102AA	NORMAL	0.98398	0.01602	NORMAL
CL2001032128AA (testset)	NORMAL	0.99351	0.00649	NORMAL
CL2001032147AA	NORMAL	0.99393	0.00607	NORMAL
CL2001032202AA (testset)	NORMAL	0.98062	0.01938	NORMAL
CL2001032206AA	NORMAL	0.98124	0.01876	NORMAL
CL2001032220AA	NORMAL	0.99671	0.00329	NORMAL
CL2001032256AA	NORMAL	0.91025	0.08975	NORMAL
CL2001032304AA	NORMAL	0.85874	0.14126	NORMAL
CL2001032718AA	NORMAL	0.98732	0.01268	NORMAL
CL2001032724AA (testset)	NORMAL	0.99182	0.00818	NORMAL
CL2001032725AA	NORMAL	0.96975	0.03025	NORMAL
CL2001032727AA (testset)	NORMAL	0.99507	0.00493	NORMAL