GO:0006811

GO:0006811

ion transport (annotated genes)

Biological Process

Parent node

GO:0006811	ion transport

This leaf node contains 134 genes

The following 15 of these are used in classification:

	Symbol	Genename	NORMAL score	SQUAMOUS score
41325_at	KCNK3	potassium channel, subfamily K, member 3	1.1298	-0.8877
32109_at	FXYD1	FXYD domain containing ion transport regulator 1 (phospholemman)	1.095	-0.8603
37684_at	SLCO2B1	solute carrier organic anion transporter family, member 2B1	0.4911	-0.3859
39682_at	SCNN1B	sodium channel, nonvoltage-gated 1, beta (Liddle syndrome)	0.453	-0.3559
41689_at	TM4SF11	transmembrane 4 superfamily member 11 (plasmolipin)	0.3057	-0.2402
41688_at	TM4SF11	transmembrane 4 superfamily member 11 (plasmolipin)	0.2726	-0.2142
39521_at	SLC12A4	solute carrier family 12 (potassium/chloride transporters), member 4	0.2272	-0.1785
31901_at	KCNAB2	potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.2183	-0.1715
34428_at	KCNJ8	potassium inwardly-rectifying channel, subfamily J, member 8	0.1502	-0.118
38625_g_at	SLC12A4	solute carrier family 12 (potassium/chloride transporters), member 4	0.1127	-0.0885
34280_at	GABRE	gamma-aminobutyric acid (GABA) A receptor, epsilon	-0.0528	0.0415
33891_at	CLIC4	chloride intracellular channel 4	0.045	-0.0354
35472_at	KCNJ15	potassium inwardly-rectifying channel, subfamily J, member 15	0.0201	-0.0158
37552_at	KCNK1	potassium channel, subfamily K, member 1	-0.0149	0.0117
40335_at	CLCN4	chloride channel 4	0.0116	-0.0092

Performance on training data

• Error rate: 0
• Performance: 0.00849
• Redundancy: 5.55546

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Performance on test data

• Error rate: 0
• Performance: 0.04807
• Redundancy: 4.45343

	Sensitivity	Specificity
NORMAL	1	1
SQUAMOUS	1	1

Predictions

	Class	NORMAL	SQUAMOUS	Predictionn
CL2001031606AA	SQUAMOUS	0	1	SQUAMOUS
CL2001031620AA (testset)	SQUAMOUS	0.00038	0.99962	SQUAMOUS
CL2001031621AA	SQUAMOUS	0.00026	0.99974	SQUAMOUS
CL2001032122AA	SQUAMOUS	0.00011	0.99989	SQUAMOUS
CL2001032129AA (testset)	SQUAMOUS	0.00027	0.99973	SQUAMOUS
CL2001032144AA	SQUAMOUS	7e-05	0.99993	SQUAMOUS
CL2001032153AA	SQUAMOUS	0.00106	0.99894	SQUAMOUS
CL2001032207AA (testset)	SQUAMOUS	0.00019	0.99981	SQUAMOUS
CL2001032209AA	SQUAMOUS	3e-05	0.99997	SQUAMOUS
CL2001032218AA (testset)	SQUAMOUS	0.00174	0.99826	SQUAMOUS
CL2001032222AA	SQUAMOUS	0.00015	0.99985	SQUAMOUS
CL2001032231AA (testset)	SQUAMOUS	0.23006	0.76994	SQUAMOUS
CL2001032239AA (testset)	SQUAMOUS	0.00102	0.99898	SQUAMOUS
CL2001032240AA	SQUAMOUS	0.00031	0.99969	SQUAMOUS
CL2001032305AA	SQUAMOUS	0.00545	0.99455	SQUAMOUS
CL2001032608AA	SQUAMOUS	0.00024	0.99976	SQUAMOUS
CL2001032627AA (testset)	SQUAMOUS	0.00082	0.99918	SQUAMOUS
CL2001032644AA	SQUAMOUS	0.00043	0.99957	SQUAMOUS
CL2001032719AA	SQUAMOUS	0.0012	0.9988	SQUAMOUS
CL2001032732AA	SQUAMOUS	0	1	SQUAMOUS
CL2001032853AA	SQUAMOUS	0.00484	0.99516	SQUAMOUS
CL2001032010AA (testset)	NORMAL	0.97274	0.02726	NORMAL
CL2001032041AA	NORMAL	0.9993	7e-04	NORMAL
CL2001032043AA	NORMAL	1	0	NORMAL
CL2001032045AA (testset)	NORMAL	0.99937	0.00063	NORMAL
CL2001032046AA	NORMAL	0.99989	0.00011	NORMAL
CL2001032102AA	NORMAL	1	0	NORMAL
CL2001032128AA (testset)	NORMAL	0.99999	1e-05	NORMAL
CL2001032147AA	NORMAL	0.99997	3e-05	NORMAL
CL2001032202AA (testset)	NORMAL	0.99915	0.00085	NORMAL
CL2001032206AA	NORMAL	0.99958	0.00042	NORMAL
CL2001032220AA	NORMAL	0.99995	5e-05	NORMAL
CL2001032256AA	NORMAL	0.91528	0.08472	NORMAL
CL2001032304AA	NORMAL	0.99849	0.00151	NORMAL
CL2001032718AA	NORMAL	0.99945	0.00055	NORMAL
CL2001032724AA (testset)	NORMAL	0.99637	0.00363	NORMAL
CL2001032725AA	NORMAL	1	0	NORMAL
CL2001032727AA (testset)	NORMAL	0.99504	0.00496	NORMAL