GO:0005975


GO:0005975

carbohydrate metabolism
(annotated genes)

Biological
Process

Parent node

This leaf node contains 124 genes

The following 13 of these are used in classification:

 SymbolGenenameNORMAL scoreSQUAMOUS score
37042_atHYAL2 hyaluronoglucosaminidase 20.6441-0.5061
1546_atHYAL1 hyaluronoglucosaminidase 10.5173-0.4065
32747_atALDH2 aldehyde dehydrogenase 2 family (mitochondrial)0.5075-0.3987
37176_atHYAL1 hyaluronoglucosaminidase 10.4635-0.3642
39432_atB4GALT4 UDP-Gal-0.44490.3495
37686_s_atUNG uracil-DNA glycosylase-0.33650.2644
38394_atKIAA0089 KIAA0089 protein0.3309-0.26
39122_atGPI glucose phosphate isomerase-0.19940.1567
39369_atKIAA0935 mannosidase alpha class 2B member 20.1195-0.0939
36680_atAMY2B amylase, alpha 2B; pancreatic0.0929-0.073
40031_atALDH3A1 aldehyde dehydrogenase 3 family, memberA1-0.0530.0416
32574_atSMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal (acid sphingomyelinase)0.0398-0.0313
37895_atSLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A10.0096-0.0075

Performance on training data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Performance on test data

 SensitivitySpecificity
NORMAL11
SQUAMOUS11

Predictions

 ClassNORMALSQUAMOUSPredictionn
CL2001031606AASQUAMOUS0.000270.99973 SQUAMOUS
CL2001031620AA (testset)SQUAMOUS0.031880.96812 SQUAMOUS
CL2001031621AASQUAMOUS0.001580.99842 SQUAMOUS
CL2001032122AASQUAMOUS0.193840.80616 SQUAMOUS
CL2001032129AA (testset)SQUAMOUS0.021810.97819 SQUAMOUS
CL2001032144AASQUAMOUS0.001860.99814 SQUAMOUS
CL2001032153AASQUAMOUS0.001960.99804 SQUAMOUS
CL2001032207AA (testset)SQUAMOUS0.002220.99778 SQUAMOUS
CL2001032209AASQUAMOUS0.000340.99966 SQUAMOUS
CL2001032218AA (testset)SQUAMOUS0.001940.99806 SQUAMOUS
CL2001032222AASQUAMOUS0.001520.99848 SQUAMOUS
CL2001032231AA (testset)SQUAMOUS0.063370.93663 SQUAMOUS
CL2001032239AA (testset)SQUAMOUS0.001080.99892 SQUAMOUS
CL2001032240AASQUAMOUS0.002590.99741 SQUAMOUS
CL2001032305AASQUAMOUS0.000610.99939 SQUAMOUS
CL2001032608AASQUAMOUS0.000460.99954 SQUAMOUS
CL2001032627AA (testset)SQUAMOUS0.006890.99311 SQUAMOUS
CL2001032644AASQUAMOUS0.000240.99976 SQUAMOUS
CL2001032719AASQUAMOUS0.005020.99498 SQUAMOUS
CL2001032732AASQUAMOUS0.003640.99636 SQUAMOUS
CL2001032853AASQUAMOUS0.000460.99954 SQUAMOUS
CL2001032010AA (testset)NORMAL0.996360.00364 NORMAL
CL2001032041AANORMAL0.977680.02232 NORMAL
CL2001032043AANORMAL0.999919e-05 NORMAL
CL2001032045AA (testset)NORMAL0.999020.00098 NORMAL
CL2001032046AANORMAL0.998730.00127 NORMAL
CL2001032102AANORMAL0.999928e-05 NORMAL
CL2001032128AA (testset)NORMAL0.993940.00606 NORMAL
CL2001032147AANORMAL0.999760.00024 NORMAL
CL2001032202AA (testset)NORMAL0.999740.00026 NORMAL
CL2001032206AANORMAL0.972490.02751 NORMAL
CL2001032220AANORMAL0.999280.00072 NORMAL
CL2001032256AANORMAL0.963040.03696 NORMAL
CL2001032304AANORMAL0.992920.00708 NORMAL
CL2001032718AANORMAL0.999982e-05 NORMAL
CL2001032724AA (testset)NORMAL0.99928e-04 NORMAL
CL2001032725AANORMAL0.999946e-05 NORMAL
CL2001032727AA (testset)NORMAL0.991360.00864 NORMAL

 


Generated by StAM on Tue Sep 7 18:07:25 2004