GO:0030154 | cell differentiation | Biological Process |
| GO:0030154 | cell differentiation |
|---|
The following 40 of these are used in classification:
| Symbol | Genename | SQUAMOUS score | other score | |
|---|---|---|---|---|
| 38750_at | NOTCH3 | Notch homolog 3 (Drosophila) | 0.8397 | -0.0969 |
| 38156_at | MDFI | MyoD family inhibitor | 0.7787 | -0.0899 |
| 41401_at | CSRP2 | cysteine and glycine-rich protein 2 | 0.6841 | -0.0789 |
| 33139_s_at | MLF1 | myeloid leukemia factor 1 | 0.553 | -0.0638 |
| 32137_at | JAG2 | jagged 2 | 0.5353 | -0.0618 |
| 38512_r_at | ELAVL3 | ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) | -0.4715 | 0.0544 |
| 39154_at | GADD45G | growth arrest and DNA-damage-inducible, gamma | -0.4586 | 0.0529 |
| 40500_at | NDRG4 | NDRG family member 4 | 0.3701 | -0.0427 |
| 38063_at | PBXIP1 | pre-B-cell leukemia transcription factor interacting protein 1 | -0.2811 | 0.0324 |
| 37504_at | SMURF1 | E3 ubiquitin ligase SMURF1 | 0.278 | -0.0321 |
| 35081_at | FGF9 | fibroblast growth factor 9 (glia-activating factor) | -0.2695 | 0.0311 |
| 1148_s_at | NRG1 | neuregulin 1 | 0.2145 | -0.0248 |
| 560_s_at | TAL1 | T-cell acute lymphocytic leukemia 1 | -0.196 | 0.0226 |
| 40118_at | ZNF3 | zinc finger protein 3 (A8-51) | 0.1739 | -0.0201 |
| 32719_at | NRG1 | neuregulin 1 | 0.1693 | -0.0195 |
| 40544_g_at | ASCL1 | achaete-scute complex-like 1 (Drosophila) | -0.1612 | 0.0186 |
| 1866_g_at | SKIL | SKI-like | 0.1357 | -0.0157 |
| 39712_at | S100A13 | S100 calcium binding protein A13 | -0.1334 | 0.0154 |
| 38616_at | NDRG2 | NDRG family member 2 | -0.1273 | 0.0147 |
| 1616_at | FGF9 | fibroblast growth factor 9 (glia-activating factor) | -0.1198 | 0.0138 |
| 1743_s_at | SKIL | SKI-like | 0.1191 | -0.0137 |
| 33653_at | MYF5 | myogenic factor 5 | -0.117 | 0.0135 |
| 31355_at | ASCL2 | achaete-scute complex-like 2 (Drosophila) | 0.1169 | -0.0135 |
| 32542_at | FHL1 | four and a half LIM domains 1 | -0.1027 | 0.0119 |
| 1918_at | SKI | v-ski sarcoma viral oncogene homolog (avian) | -0.0927 | 0.0107 |
| 40543_at | ASCL1 | achaete-scute complex-like 1 (Drosophila) | -0.0855 | 0.0099 |
| 38205_at | NEUROD2 | neurogenic differentiation 2 | -0.0796 | 0.0092 |
| 882_at | CSF1 | colony stimulating factor 1 (macrophage) | 0.0766 | -0.0088 |
| 39935_at | SKIL | SKI-like | 0.0712 | -0.0082 |
| 39508_at | NDRG2 | NDRG family member 2 | -0.0564 | 0.0065 |
| 41499_at | SKI | v-ski sarcoma viral oncogene homolog (avian) | 0.0546 | -0.0063 |
| 40542_at | ASCL1 | achaete-scute complex-like 1 (Drosophila) | -0.0524 | 0.006 |
| 887_at | GDF1 | growth differentiation factor 1 | 0.0399 | -0.0046 |
| 32549_at | PAPPA | pregnancy-associated plasma protein A | -0.0399 | 0.0046 |
| 39048_at | NOTCH4 | Notch homolog 4 (Drosophila) | -0.0357 | 0.0041 |
| 37425_g_at | C6orf18 | chromosome 6 open reading frame 18 | 0.0355 | -0.0041 |
| 37139_at | ED1 | ectodermal dysplasia 1, anhidrotic | -0.034 | 0.0039 |
| 40357_at | INHBA | inhibin, beta A (activin A, activin AB alpha polypeptide) | 0.0306 | -0.0035 |
| 38544_at | INHA | inhibin, alpha | -0.026 | 0.003 |
| 38545_at | INHBB | inhibin, beta B (activin AB beta polypeptide) | -0.024 | 0.0028 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.71429 | 0.98352 |
| other | 0.98352 | 0.71429 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.71429 | 0.98352 |
| other | 0.98352 | 0.71429 |
| Class | SQUAMOUS | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 0.40094 | 0.59906 | other |
| CL2001031607AA (testset) | other | 0.00396 | 0.99604 | other |
| CL2001031608AA (testset) | other | 0.00381 | 0.99619 | other |
| CL2001031609AA (testset) | other | 0.00337 | 0.99663 | other |
| CL2001031611AA (testset) | other | 0.0287 | 0.9713 | other |
| CL2001031612AA (testset) | other | 0.02502 | 0.97498 | other |
| CL2001031613AA (testset) | other | 0.10569 | 0.89431 | other |
| CL2001031615AA (testset) | other | 0.05785 | 0.94215 | other |
| CL2001031616AA (testset) | other | 0.20497 | 0.79503 | other |
| CL2001031618AA (testset) | other | 0.00204 | 0.99796 | other |
| CL2001031620AA (testset) | SQUAMOUS | 0.61856 | 0.38144 | SQUAMOUS |
| CL2001031621AA (testset) | SQUAMOUS | 0.75876 | 0.24124 | SQUAMOUS |
| CL2001031622AA (testset) | other | 0.40748 | 0.59252 | other |
| CL2001031625AA (testset) | other | 0.00762 | 0.99238 | other |
| CL2001031627AA (testset) | other | 0.01238 | 0.98762 | other |
| CL2001031628AA (testset) | other | 0.01106 | 0.98894 | other |
| CL2001031629AA (testset) | other | 0.44009 | 0.55991 | other |
| CL2001031630AA (testset) | other | 0.00441 | 0.99559 | other |
| CL2001031631AA (testset) | other | 0.07467 | 0.92533 | other |
| CL2001031632AA (testset) | other | 0.16549 | 0.83451 | other |
| CL2001031634AA (testset) | other | 0.01031 | 0.98969 | other |
| CL2001031635AA (testset) | other | 0.00319 | 0.99681 | other |
| CL2001031636AA (testset) | other | 0.02974 | 0.97026 | other |
| CL2001032002AA (testset) | other | 0.00096 | 0.99904 | other |
| CL2001032005AA (testset) | other | 0.00141 | 0.99859 | other |
| CL2001032008AA (testset) | other | 0.09471 | 0.90529 | other |
| CL2001032009AA (testset) | other | 0.00034 | 0.99966 | other |
| CL2001032010AA (testset) | other | 0.00753 | 0.99247 | other |
| CL2001032011AA (testset) | other | 0.02786 | 0.97214 | other |
| CL2001032012AA (testset) | other | 0.00108 | 0.99892 | other |
| CL2001032013AA (testset) | other | 0.03143 | 0.96857 | other |
| CL2001032015AA (testset) | other | 0.18489 | 0.81511 | other |
| CL2001032016AA (testset) | other | 0.00687 | 0.99313 | other |
| CL2001032019AA (testset) | other | 0.02787 | 0.97213 | other |
| CL2001032020AA (testset) | other | 0.10018 | 0.89982 | other |
| CL2001032025AA (testset) | other | 0.00082 | 0.99918 | other |
| CL2001032026AA (testset) | other | 0.00663 | 0.99337 | other |
| CL2001032027AA (testset) | other | 0.01914 | 0.98086 | other |
| CL2001032030AA (testset) | other | 0.01045 | 0.98955 | other |
| CL2001032031AA (testset) | other | 0.02478 | 0.97522 | other |
| CL2001032032AA (testset) | other | 0.00072 | 0.99928 | other |
| CL2001032034AA (testset) | other | 0.00515 | 0.99485 | other |
| CL2001032036AA (testset) | other | 0.59412 | 0.40588 | SQUAMOUS |
| CL2001032041AA (testset) | other | 0.0253 | 0.9747 | other |
| CL2001032043AA (testset) | other | 0.0043 | 0.9957 | other |
| CL2001032044AA (testset) | other | 0.00072 | 0.99928 | other |
| CL2001032045AA (testset) | other | 0.00164 | 0.99836 | other |
| CL2001032046AA (testset) | other | 0.00375 | 0.99625 | other |
| CL2001032101AA (testset) | other | 0.01719 | 0.98281 | other |
| CL2001032102AA (testset) | other | 0.0057 | 0.9943 | other |
| CL2001032103AA (testset) | other | 0.00476 | 0.99524 | other |
| CL2001032104AA (testset) | other | 0.16601 | 0.83399 | other |
| CL2001032105AA (testset) | other | 0.00606 | 0.99394 | other |
| CL2001032107AA (testset) | other | 0.00191 | 0.99809 | other |
| CL2001032108AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032109AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032110AA (testset) | other | 0.00759 | 0.99241 | other |
| CL2001032111AA (testset) | other | 0.00558 | 0.99442 | other |
| CL2001032113AA (testset) | other | 0.01066 | 0.98934 | other |
| CL2001032114AA (testset) | other | 0.0091 | 0.9909 | other |
| CL2001032115AA (testset) | other | 0.00039 | 0.99961 | other |
| CL2001032116AA (testset) | other | 0.02531 | 0.97469 | other |
| CL2001032117AA (testset) | other | 0.12279 | 0.87721 | other |
| CL2001032121AA (testset) | other | 0.01494 | 0.98506 | other |
| CL2001032122AA (testset) | SQUAMOUS | 0.57498 | 0.42502 | SQUAMOUS |
| CL2001032124AA (testset) | other | 0.0038 | 0.9962 | other |
| CL2001032125AA (testset) | other | 0.1387 | 0.8613 | other |
| CL2001032127AA (testset) | other | 0.00166 | 0.99834 | other |
| CL2001032128AA (testset) | other | 0.01076 | 0.98924 | other |
| CL2001032129AA (testset) | SQUAMOUS | 0.9819 | 0.0181 | SQUAMOUS |
| CL2001032130AA (testset) | other | 0.12334 | 0.87666 | other |
| CL2001032132AA (testset) | other | 0.02569 | 0.97431 | other |
| CL2001032134AA (testset) | other | 0.07063 | 0.92937 | other |
| CL2001032135AA (testset) | other | 0.0626 | 0.9374 | other |
| CL2001032136AA (testset) | other | 0.14035 | 0.85965 | other |
| CL2001032138AA (testset) | other | 0.04276 | 0.95724 | other |
| CL2001032141AA (testset) | other | 0.22184 | 0.77816 | other |
| CL2001032142AA (testset) | other | 0.17274 | 0.82726 | other |
| CL2001032144AA (testset) | SQUAMOUS | 0.89611 | 0.10389 | SQUAMOUS |
| CL2001032145AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032147AA (testset) | other | 0.01025 | 0.98975 | other |
| CL2001032149AA (testset) | other | 0.12449 | 0.87551 | other |
| CL2001032151AA (testset) | other | 0.00054 | 0.99946 | other |
| CL2001032152AA (testset) | other | 0.00017 | 0.99983 | other |
| CL2001032153AA (testset) | SQUAMOUS | 0.36854 | 0.63146 | other |
| CL2001032155AA (testset) | other | 0.04016 | 0.95984 | other |
| CL2001032156AA (testset) | other | 0.06529 | 0.93471 | other |
| CL2001032202AA (testset) | other | 0.02301 | 0.97699 | other |
| CL2001032206AA (testset) | other | 0.01768 | 0.98232 | other |
| CL2001032207AA (testset) | SQUAMOUS | 0.93026 | 0.06974 | SQUAMOUS |
| CL2001032209AA (testset) | SQUAMOUS | 0.98858 | 0.01142 | SQUAMOUS |
| CL2001032210AA (testset) | other | 0.00315 | 0.99685 | other |
| CL2001032211AA (testset) | other | 0.15717 | 0.84283 | other |
| CL2001032212AA (testset) | other | 0.01279 | 0.98721 | other |
| CL2001032213AA (testset) | other | 0.01516 | 0.98484 | other |
| CL2001032214AA (testset) | other | 0.03216 | 0.96784 | other |
| CL2001032217AA (testset) | other | 0.00048 | 0.99952 | other |
| CL2001032218AA (testset) | SQUAMOUS | 0.58646 | 0.41354 | SQUAMOUS |
| CL2001032219AA (testset) | other | 0.00201 | 0.99799 | other |
| CL2001032220AA (testset) | other | 0.00247 | 0.99753 | other |
| CL2001032222AA (testset) | SQUAMOUS | 0.17263 | 0.82737 | other |
| CL2001032229AA (testset) | other | 0.00795 | 0.99205 | other |
| CL2001032231AA (testset) | SQUAMOUS | 0.36621 | 0.63379 | other |
| CL2001032232AA (testset) | other | 0.00754 | 0.99246 | other |
| CL2001032233AA (testset) | other | 0.03176 | 0.96824 | other |
| CL2001032238AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001032239AA (testset) | SQUAMOUS | 0.72011 | 0.27989 | SQUAMOUS |
| CL2001032240AA (testset) | SQUAMOUS | 0.85357 | 0.14643 | SQUAMOUS |
| CL2001032241AA (testset) | other | 0.00818 | 0.99182 | other |
| CL2001032242AA (testset) | other | 0.04879 | 0.95121 | other |
| CL2001032243AA (testset) | other | 0.00157 | 0.99843 | other |
| CL2001032248AA (testset) | other | 0.01518 | 0.98482 | other |
| CL2001032249AA (testset) | other | 0.02585 | 0.97415 | other |
| CL2001032252AA (testset) | other | 0.84835 | 0.15165 | SQUAMOUS |
| CL2001032254AA (testset) | other | 0.01443 | 0.98557 | other |
| CL2001032255AA (testset) | other | 0.05416 | 0.94584 | other |
| CL2001032256AA (testset) | other | 0.01856 | 0.98144 | other |
| CL2001032259AA (testset) | other | 0.00233 | 0.99767 | other |
| CL2001032260AA (testset) | other | 0.0502 | 0.9498 | other |
| CL2001032301AA (testset) | other | 0.03553 | 0.96447 | other |
| CL2001032304AA (testset) | other | 0.02511 | 0.97489 | other |
| CL2001032305AA (testset) | SQUAMOUS | 0.06105 | 0.93895 | other |
| CL2001032306AA (testset) | other | 0.06771 | 0.93229 | other |
| CL2001032307AA (testset) | other | 0.02949 | 0.97051 | other |
| CL2001032308AA (testset) | other | 0.06381 | 0.93619 | other |
| CL2001032309AA (testset) | other | 0.00084 | 0.99916 | other |
| CL2001032310AA (testset) | other | 0.00219 | 0.99781 | other |
| CL2001032311AA (testset) | other | 0.63874 | 0.36126 | SQUAMOUS |
| CL2001032312AA (testset) | other | 0.0159 | 0.9841 | other |
| CL2001032313AA (testset) | other | 0.01799 | 0.98201 | other |
| CL2001032314AA (testset) | other | 0.00167 | 0.99833 | other |
| CL2001032316AA (testset) | other | 0.00081 | 0.99919 | other |
| CL2001032601AA (testset) | other | 0.01276 | 0.98724 | other |
| CL2001032602AA (testset) | other | 0.00277 | 0.99723 | other |
| CL2001032604AA (testset) | other | 0.01021 | 0.98979 | other |
| CL2001032607AA (testset) | other | 0.00705 | 0.99295 | other |
| CL2001032608AA (testset) | SQUAMOUS | 0.99412 | 0.00588 | SQUAMOUS |
| CL2001032610AA (testset) | other | 0.00561 | 0.99439 | other |
| CL2001032612AA (testset) | other | 0.00763 | 0.99237 | other |
| CL2001032613AA (testset) | other | 0.00717 | 0.99283 | other |
| CL2001032614AA (testset) | other | 0.02063 | 0.97937 | other |
| CL2001032616AA (testset) | other | 0.00183 | 0.99817 | other |
| CL2001032617AA (testset) | other | 0.24905 | 0.75095 | other |
| CL2001032620AA (testset) | other | 0.01639 | 0.98361 | other |
| CL2001032625AA (testset) | other | 0.00123 | 0.99877 | other |
| CL2001032627AA (testset) | SQUAMOUS | 0.97253 | 0.02747 | SQUAMOUS |
| CL2001032628AA (testset) | other | 0.01339 | 0.98661 | other |
| CL2001032629AA (testset) | other | 2e-04 | 0.9998 | other |
| CL2001032630AA (testset) | other | 0.00275 | 0.99725 | other |
| CL2001032632AA (testset) | other | 0.00289 | 0.99711 | other |
| CL2001032638AA (testset) | other | 0.02382 | 0.97618 | other |
| CL2001032640AA (testset) | other | 0.00156 | 0.99844 | other |
| CL2001032643AA (testset) | other | 0.1447 | 0.8553 | other |
| CL2001032644AA (testset) | SQUAMOUS | 0.61537 | 0.38463 | SQUAMOUS |
| CL2001032647AA (testset) | other | 0.03882 | 0.96118 | other |
| CL2001032701AA (testset) | other | 0.007 | 0.993 | other |
| CL2001032702AA (testset) | other | 0.04259 | 0.95741 | other |
| CL2001032703AA (testset) | other | 0.05392 | 0.94608 | other |
| CL2001032704AA (testset) | other | 0.00797 | 0.99203 | other |
| CL2001032706AA (testset) | other | 0.00637 | 0.99363 | other |
| CL2001032709AA (testset) | other | 0.04725 | 0.95275 | other |
| CL2001032716AA (testset) | other | 0.08938 | 0.91062 | other |
| CL2001032717AA (testset) | other | 0.00754 | 0.99246 | other |
| CL2001032718AA (testset) | other | 0.0483 | 0.9517 | other |
| CL2001032719AA (testset) | SQUAMOUS | 0.97467 | 0.02533 | SQUAMOUS |
| CL2001032720AA (testset) | other | 0.00025 | 0.99975 | other |
| CL2001032722AA (testset) | other | 0.00165 | 0.99835 | other |
| CL2001032724AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001032725AA (testset) | other | 0.00792 | 0.99208 | other |
| CL2001032727AA (testset) | other | 0.00705 | 0.99295 | other |
| CL2001032729AA (testset) | other | 0.01133 | 0.98867 | other |
| CL2001032730AA (testset) | other | 0.012 | 0.988 | other |
| CL2001032732AA (testset) | SQUAMOUS | 0.28001 | 0.71999 | other |
| CL2001032733AA (testset) | other | 0.0013 | 0.9987 | other |
| CL2001032738AA (testset) | other | 0.00816 | 0.99184 | other |
| CL2001032742AA (testset) | other | 0.07125 | 0.92875 | other |
| CL2001032746AA (testset) | other | 0.04174 | 0.95826 | other |
| CL2001032747AA (testset) | other | 0.00671 | 0.99329 | other |
| CL2001032833AA (testset) | other | 0.00331 | 0.99669 | other |
| CL2001032836AA (testset) | other | 0.01765 | 0.98235 | other |
| CL2001032838AA (testset) | other | 0.01827 | 0.98173 | other |
| CL2001032839AA (testset) | other | 0.00207 | 0.99793 | other |
| CL2001032841AA (testset) | other | 0.06206 | 0.93794 | other |
| CL2001032842AA (testset) | other | 0.00156 | 0.99844 | other |
| CL2001032843AA (testset) | other | 0.03217 | 0.96783 | other |
| CL2001032845AA (testset) | other | 0.00948 | 0.99052 | other |
| CL2001032846AA (testset) | other | 0.01424 | 0.98576 | other |
| CL2001032847AA (testset) | other | 0.00332 | 0.99668 | other |
| CL2001032848AA (testset) | other | 0.02249 | 0.97751 | other |
| CL2001032850AA (testset) | other | 0.00165 | 0.99835 | other |
| CL2001032853AA (testset) | SQUAMOUS | 0.8971 | 0.1029 | SQUAMOUS |
| CL2001032854AA (testset) | other | 0.00246 | 0.99754 | other |
| CL2001032856AA (testset) | other | 0.00648 | 0.99352 | other |
| CL2001032857AA (testset) | other | 0.00096 | 0.99904 | other |
| CL2001032860AA (testset) | other | 0.02077 | 0.97923 | other |
| CL2001040305AA (testset) | other | 0.00231 | 0.99769 | other |
| CL2001040306AA (testset) | other | 0.00169 | 0.99831 | other |
| CL2001041708AA (testset) | other | 0.42885 | 0.57115 | other |
| CL2001041711AA (testset) | other | 0.002 | 0.998 | other |
| CL2001041716AA (testset) | other | 0.06811 | 0.93189 | other |
| CL2001042501AA (testset) | other | 0.00273 | 0.99727 | other |
| CL2001042505AA (testset) | other | 0.01474 | 0.98526 | other |
| CL2001042506AA (testset) | other | 0.01387 | 0.98613 | other |