GO:0007417 | central nervous system development | Biological Process |
| GO:0007417 | central nervous system development |
|---|
The following 39 of these are used in classification:
| Symbol | Genename | SQUAMOUS score | other score | |
|---|---|---|---|---|
| 1364_at | PTPRZ1 | protein tyrosine phosphatase, receptor-type, Z polypeptide 1 | 1.5014 | -0.1732 |
| 34782_at | JARID2 | Jumonji, AT rich interactive domain 2 | 1.0189 | -0.1176 |
| 33357_at | NCKAP1 | NCK-associated protein 1 | 0.7334 | -0.0846 |
| 40350_at | ADAM23 | a disintegrin and metalloproteinase domain 23 | 0.7139 | -0.0824 |
| 35697_at | PTS | 6-pyruvoyltetrahydropterin synthase | 0.6754 | -0.0779 |
| 39159_at | SH3GL1 | SH3-domain GRB2-like 1 | 0.6501 | -0.075 |
| 37259_at | SERPINI1 | serine (or cysteine) proteinase inhibitor, clade I (neuroserpin), member 1 | 0.4531 | -0.0523 |
| 36363_at | UGT8 | UDP glycosyltransferase 8 (UDP-galactose ceramide galactosyltransferase) | 0.4364 | -0.0504 |
| 32076_at | DSCR1L1 | Down syndrome critical region gene 1-like 1 | -0.3988 | 0.046 |
| 40489_at | DRPLA | dentatorubral-pallidoluysian atrophy (atrophin-1) | 0.2939 | -0.0339 |
| 32115_r_at | ADORA2A | adenosine A2a receptor | 0.2829 | -0.0326 |
| 37580_at | SH3GL3 | SH3-domain GRB2-like 3 | 0.2749 | -0.0317 |
| 40317_at | ACCN1 | amiloride-sensitive cation channel 1, neuronal (degenerin) | 0.2592 | -0.0299 |
| 37576_at | PCP4 | Purkinje cell protein 4 | -0.2348 | 0.0271 |
| 32114_s_at | ADORA2A | adenosine A2a receptor | -0.2194 | 0.0253 |
| 33086_at | PROP1 | prophet of Pit1, paired-like homeodomain transcription factor | -0.2126 | 0.0245 |
| 31355_at | ASCL2 | achaete-scute complex-like 2 (Drosophila) | 0.1904 | -0.022 |
| 37868_s_at | MOG | myelin oligodendrocyte glycoprotein | -0.1889 | 0.0218 |
| 38957_at | DCAMKL1 | doublecortin and CaM kinase-like 1 | -0.1652 | 0.0191 |
| 40902_at | WWP1 | WW domain-containing protein 1 | -0.1573 | 0.0181 |
| 32952_at | POU6F2 | POU domain, class 6, transcription factor 2 | -0.1471 | 0.017 |
| 37554_at | KLK6 | kallikrein 6 (neurosin, zyme) | 0.1421 | -0.0164 |
| 37287_at | NRCAM | neuronal cell adhesion molecule | -0.1392 | 0.0161 |
| 32950_at | POU6F2 | POU domain, class 6, transcription factor 2 | 0.1384 | -0.016 |
| 784_g_at | WWP1 | WW domain-containing protein 1 | 0.1369 | -0.0158 |
| 37286_at | NRCAM | neuronal cell adhesion molecule | 0.1236 | -0.0143 |
| 35817_at | MBP | myelin basic protein | -0.1201 | 0.0139 |
| 35079_at | CNTN6 | contactin 6 | -0.115 | 0.0133 |
| 33005_at | AD7C-NTP | neuronal thread protein | 0.0957 | -0.011 |
| 37867_at | MOG | myelin oligodendrocyte glycoprotein | -0.0844 | 0.0097 |
| 38748_at | ADARB1 | adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) | -0.0774 | 0.0089 |
| 40378_at | SH3GL2 | SH3-domain GRB2-like 2 | -0.0763 | 0.0088 |
| 33019_at | PARK2 | Parkinson disease (autosomal recessive, juvenile) 2, parkin | -0.0692 | 0.008 |
| 31915_at | DRP2 | dystrophin related protein 2 | -0.0661 | 0.0076 |
| 783_at | WWP1 | WW domain-containing protein 1 | 0.0605 | -0.007 |
| 37288_g_at | NRCAM | neuronal cell adhesion molecule | 0.0407 | -0.0047 |
| 32951_g_at | POU6F2 | POU domain, class 6, transcription factor 2 | 0.0255 | -0.0029 |
| 37291_r_at | SNCA | synuclein, alpha (non A4 component of amyloid precursor) | -0.0117 | 0.0013 |
| 41578_at | NHLH2 | nescient helix loop helix 2 | -0.0082 | 9e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.71429 | 0.99451 |
| other | 0.99451 | 0.71429 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.71429 | 0.99451 |
| other | 0.99451 | 0.71429 |
| Class | SQUAMOUS | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 0.9311 | 0.0689 | SQUAMOUS |
| CL2001031607AA (testset) | other | 0.00535 | 0.99465 | other |
| CL2001031608AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001031609AA (testset) | other | 0.00652 | 0.99348 | other |
| CL2001031611AA (testset) | other | 0.00635 | 0.99365 | other |
| CL2001031612AA (testset) | other | 0.13407 | 0.86593 | other |
| CL2001031613AA (testset) | other | 0.03033 | 0.96967 | other |
| CL2001031615AA (testset) | other | 0.001 | 0.999 | other |
| CL2001031616AA (testset) | other | 0.01957 | 0.98043 | other |
| CL2001031618AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001031620AA (testset) | SQUAMOUS | 0.16875 | 0.83125 | other |
| CL2001031621AA (testset) | SQUAMOUS | 0.99863 | 0.00137 | SQUAMOUS |
| CL2001031622AA (testset) | other | 0.04156 | 0.95844 | other |
| CL2001031625AA (testset) | other | 0.00085 | 0.99915 | other |
| CL2001031627AA (testset) | other | 0.00056 | 0.99944 | other |
| CL2001031628AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001031629AA (testset) | other | 0.01907 | 0.98093 | other |
| CL2001031630AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001031631AA (testset) | other | 0.00318 | 0.99682 | other |
| CL2001031632AA (testset) | other | 0.01729 | 0.98271 | other |
| CL2001031634AA (testset) | other | 3e-04 | 0.9997 | other |
| CL2001031635AA (testset) | other | 0.00021 | 0.99979 | other |
| CL2001031636AA (testset) | other | 0.05302 | 0.94698 | other |
| CL2001032002AA (testset) | other | 0.00054 | 0.99946 | other |
| CL2001032005AA (testset) | other | 0.00089 | 0.99911 | other |
| CL2001032008AA (testset) | other | 0.03584 | 0.96416 | other |
| CL2001032009AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032010AA (testset) | other | 0.00036 | 0.99964 | other |
| CL2001032011AA (testset) | other | 0.00231 | 0.99769 | other |
| CL2001032012AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032013AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001032015AA (testset) | other | 0.00266 | 0.99734 | other |
| CL2001032016AA (testset) | other | 0.00028 | 0.99972 | other |
| CL2001032019AA (testset) | other | 0.00057 | 0.99943 | other |
| CL2001032020AA (testset) | other | 0.00112 | 0.99888 | other |
| CL2001032025AA (testset) | other | 0.00029 | 0.99971 | other |
| CL2001032026AA (testset) | other | 0.00094 | 0.99906 | other |
| CL2001032027AA (testset) | other | 0.01055 | 0.98945 | other |
| CL2001032030AA (testset) | other | 0.00873 | 0.99127 | other |
| CL2001032031AA (testset) | other | 0.00282 | 0.99718 | other |
| CL2001032032AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032034AA (testset) | other | 0.00187 | 0.99813 | other |
| CL2001032036AA (testset) | other | 0.20644 | 0.79356 | other |
| CL2001032041AA (testset) | other | 0.00138 | 0.99862 | other |
| CL2001032043AA (testset) | other | 0.00175 | 0.99825 | other |
| CL2001032044AA (testset) | other | 0.00095 | 0.99905 | other |
| CL2001032045AA (testset) | other | 0.00087 | 0.99913 | other |
| CL2001032046AA (testset) | other | 0.00104 | 0.99896 | other |
| CL2001032101AA (testset) | other | 0.00391 | 0.99609 | other |
| CL2001032102AA (testset) | other | 0.00019 | 0.99981 | other |
| CL2001032103AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032104AA (testset) | other | 0.00184 | 0.99816 | other |
| CL2001032105AA (testset) | other | 0.00145 | 0.99855 | other |
| CL2001032107AA (testset) | other | 0.00116 | 0.99884 | other |
| CL2001032108AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032109AA (testset) | other | 0.00023 | 0.99977 | other |
| CL2001032110AA (testset) | other | 0.00081 | 0.99919 | other |
| CL2001032111AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032113AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032114AA (testset) | other | 0.00083 | 0.99917 | other |
| CL2001032115AA (testset) | other | 0.00024 | 0.99976 | other |
| CL2001032116AA (testset) | other | 0.00109 | 0.99891 | other |
| CL2001032117AA (testset) | other | 0.00305 | 0.99695 | other |
| CL2001032121AA (testset) | other | 0.02665 | 0.97335 | other |
| CL2001032122AA (testset) | SQUAMOUS | 0.72374 | 0.27626 | SQUAMOUS |
| CL2001032124AA (testset) | other | 0.00045 | 0.99955 | other |
| CL2001032125AA (testset) | other | 0.00192 | 0.99808 | other |
| CL2001032127AA (testset) | other | 0.00311 | 0.99689 | other |
| CL2001032128AA (testset) | other | 0.00098 | 0.99902 | other |
| CL2001032129AA (testset) | SQUAMOUS | 0.98242 | 0.01758 | SQUAMOUS |
| CL2001032130AA (testset) | other | 0.00278 | 0.99722 | other |
| CL2001032132AA (testset) | other | 0.00306 | 0.99694 | other |
| CL2001032134AA (testset) | other | 0.04332 | 0.95668 | other |
| CL2001032135AA (testset) | other | 0.01202 | 0.98798 | other |
| CL2001032136AA (testset) | other | 0.00985 | 0.99015 | other |
| CL2001032138AA (testset) | other | 0.00708 | 0.99292 | other |
| CL2001032141AA (testset) | other | 0.00643 | 0.99357 | other |
| CL2001032142AA (testset) | other | 0.38886 | 0.61114 | other |
| CL2001032144AA (testset) | SQUAMOUS | 0.82149 | 0.17851 | SQUAMOUS |
| CL2001032145AA (testset) | other | 0.00087 | 0.99913 | other |
| CL2001032147AA (testset) | other | 0.00152 | 0.99848 | other |
| CL2001032149AA (testset) | other | 0.08353 | 0.91647 | other |
| CL2001032151AA (testset) | other | 0.0063 | 0.9937 | other |
| CL2001032152AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032153AA (testset) | SQUAMOUS | 0.99503 | 0.00497 | SQUAMOUS |
| CL2001032155AA (testset) | other | 0.31805 | 0.68195 | other |
| CL2001032156AA (testset) | other | 0.01345 | 0.98655 | other |
| CL2001032202AA (testset) | other | 0.00142 | 0.99858 | other |
| CL2001032206AA (testset) | other | 0.00124 | 0.99876 | other |
| CL2001032207AA (testset) | SQUAMOUS | 0.97513 | 0.02487 | SQUAMOUS |
| CL2001032209AA (testset) | SQUAMOUS | 0.99999 | 1e-05 | SQUAMOUS |
| CL2001032210AA (testset) | other | 0.00432 | 0.99568 | other |
| CL2001032211AA (testset) | other | 0.00377 | 0.99623 | other |
| CL2001032212AA (testset) | other | 0.00243 | 0.99757 | other |
| CL2001032213AA (testset) | other | 0.01189 | 0.98811 | other |
| CL2001032214AA (testset) | other | 0.00674 | 0.99326 | other |
| CL2001032217AA (testset) | other | 0.00298 | 0.99702 | other |
| CL2001032218AA (testset) | SQUAMOUS | 0.91182 | 0.08818 | SQUAMOUS |
| CL2001032219AA (testset) | other | 0.03216 | 0.96784 | other |
| CL2001032220AA (testset) | other | 0.00035 | 0.99965 | other |
| CL2001032222AA (testset) | SQUAMOUS | 0.39056 | 0.60944 | other |
| CL2001032229AA (testset) | other | 0.00027 | 0.99973 | other |
| CL2001032231AA (testset) | SQUAMOUS | 0.49988 | 0.50012 | other |
| CL2001032232AA (testset) | other | 0.00019 | 0.99981 | other |
| CL2001032233AA (testset) | other | 0.00256 | 0.99744 | other |
| CL2001032238AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032239AA (testset) | SQUAMOUS | 0.93977 | 0.06023 | SQUAMOUS |
| CL2001032240AA (testset) | SQUAMOUS | 0.93015 | 0.06985 | SQUAMOUS |
| CL2001032241AA (testset) | other | 0.00037 | 0.99963 | other |
| CL2001032242AA (testset) | other | 0.00429 | 0.99571 | other |
| CL2001032243AA (testset) | other | 0.00065 | 0.99935 | other |
| CL2001032248AA (testset) | other | 0.00335 | 0.99665 | other |
| CL2001032249AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032252AA (testset) | other | 0.15771 | 0.84229 | other |
| CL2001032254AA (testset) | other | 0.00361 | 0.99639 | other |
| CL2001032255AA (testset) | other | 0.00275 | 0.99725 | other |
| CL2001032256AA (testset) | other | 0.0016 | 0.9984 | other |
| CL2001032259AA (testset) | other | 0.00031 | 0.99969 | other |
| CL2001032260AA (testset) | other | 0.00071 | 0.99929 | other |
| CL2001032301AA (testset) | other | 0.00377 | 0.99623 | other |
| CL2001032304AA (testset) | other | 0.00397 | 0.99603 | other |
| CL2001032305AA (testset) | SQUAMOUS | 0.07947 | 0.92053 | other |
| CL2001032306AA (testset) | other | 0.01207 | 0.98793 | other |
| CL2001032307AA (testset) | other | 0.00517 | 0.99483 | other |
| CL2001032308AA (testset) | other | 0.00149 | 0.99851 | other |
| CL2001032309AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032310AA (testset) | other | 5e-04 | 0.9995 | other |
| CL2001032311AA (testset) | other | 0.00489 | 0.99511 | other |
| CL2001032312AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032313AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032314AA (testset) | other | 0.00028 | 0.99972 | other |
| CL2001032316AA (testset) | other | 0.00317 | 0.99683 | other |
| CL2001032601AA (testset) | other | 0.01822 | 0.98178 | other |
| CL2001032602AA (testset) | other | 0.00106 | 0.99894 | other |
| CL2001032604AA (testset) | other | 0.00046 | 0.99954 | other |
| CL2001032607AA (testset) | other | 0.00458 | 0.99542 | other |
| CL2001032608AA (testset) | SQUAMOUS | 0.99937 | 0.00063 | SQUAMOUS |
| CL2001032610AA (testset) | other | 0.00106 | 0.99894 | other |
| CL2001032612AA (testset) | other | 0.00032 | 0.99968 | other |
| CL2001032613AA (testset) | other | 0.00043 | 0.99957 | other |
| CL2001032614AA (testset) | other | 0.0063 | 0.9937 | other |
| CL2001032616AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032617AA (testset) | other | 0.01643 | 0.98357 | other |
| CL2001032620AA (testset) | other | 0.00091 | 0.99909 | other |
| CL2001032625AA (testset) | other | 0.00077 | 0.99923 | other |
| CL2001032627AA (testset) | SQUAMOUS | 0.97731 | 0.02269 | SQUAMOUS |
| CL2001032628AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032629AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032630AA (testset) | other | 0.00208 | 0.99792 | other |
| CL2001032632AA (testset) | other | 0.00452 | 0.99548 | other |
| CL2001032638AA (testset) | other | 0.00504 | 0.99496 | other |
| CL2001032640AA (testset) | other | 0.00046 | 0.99954 | other |
| CL2001032643AA (testset) | other | 0.00763 | 0.99237 | other |
| CL2001032644AA (testset) | SQUAMOUS | 0.99838 | 0.00162 | SQUAMOUS |
| CL2001032647AA (testset) | other | 0.00031 | 0.99969 | other |
| CL2001032701AA (testset) | other | 0.00039 | 0.99961 | other |
| CL2001032702AA (testset) | other | 0.00328 | 0.99672 | other |
| CL2001032703AA (testset) | other | 0.01357 | 0.98643 | other |
| CL2001032704AA (testset) | other | 0.00541 | 0.99459 | other |
| CL2001032706AA (testset) | other | 0.00072 | 0.99928 | other |
| CL2001032709AA (testset) | other | 0.00067 | 0.99933 | other |
| CL2001032716AA (testset) | other | 0.51781 | 0.48219 | SQUAMOUS |
| CL2001032717AA (testset) | other | 0.00096 | 0.99904 | other |
| CL2001032718AA (testset) | other | 0.00841 | 0.99159 | other |
| CL2001032719AA (testset) | SQUAMOUS | 0.05087 | 0.94913 | other |
| CL2001032720AA (testset) | other | 0.00043 | 0.99957 | other |
| CL2001032722AA (testset) | other | 0.00134 | 0.99866 | other |
| CL2001032724AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032725AA (testset) | other | 0.00024 | 0.99976 | other |
| CL2001032727AA (testset) | other | 0.00146 | 0.99854 | other |
| CL2001032729AA (testset) | other | 0.00077 | 0.99923 | other |
| CL2001032730AA (testset) | other | 0.00039 | 0.99961 | other |
| CL2001032732AA (testset) | SQUAMOUS | 0.00559 | 0.99441 | other |
| CL2001032733AA (testset) | other | 0.00087 | 0.99913 | other |
| CL2001032738AA (testset) | other | 0.00336 | 0.99664 | other |
| CL2001032742AA (testset) | other | 0.12693 | 0.87307 | other |
| CL2001032746AA (testset) | other | 0.0034 | 0.9966 | other |
| CL2001032747AA (testset) | other | 0.00535 | 0.99465 | other |
| CL2001032833AA (testset) | other | 0.00324 | 0.99676 | other |
| CL2001032836AA (testset) | other | 0.20948 | 0.79052 | other |
| CL2001032838AA (testset) | other | 0.04201 | 0.95799 | other |
| CL2001032839AA (testset) | other | 0.00044 | 0.99956 | other |
| CL2001032841AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032842AA (testset) | other | 0.02222 | 0.97778 | other |
| CL2001032843AA (testset) | other | 0.00211 | 0.99789 | other |
| CL2001032845AA (testset) | other | 0.00024 | 0.99976 | other |
| CL2001032846AA (testset) | other | 0.00371 | 0.99629 | other |
| CL2001032847AA (testset) | other | 0.00162 | 0.99838 | other |
| CL2001032848AA (testset) | other | 0.00349 | 0.99651 | other |
| CL2001032850AA (testset) | other | 0.00088 | 0.99912 | other |
| CL2001032853AA (testset) | SQUAMOUS | 0.99331 | 0.00669 | SQUAMOUS |
| CL2001032854AA (testset) | other | 0.00302 | 0.99698 | other |
| CL2001032856AA (testset) | other | 0.00135 | 0.99865 | other |
| CL2001032857AA (testset) | other | 0.00031 | 0.99969 | other |
| CL2001032860AA (testset) | other | 0.01974 | 0.98026 | other |
| CL2001040305AA (testset) | other | 0.00117 | 0.99883 | other |
| CL2001040306AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001041708AA (testset) | other | 0.02525 | 0.97475 | other |
| CL2001041711AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001041716AA (testset) | other | 0.00156 | 0.99844 | other |
| CL2001042501AA (testset) | other | 0.00051 | 0.99949 | other |
| CL2001042505AA (testset) | other | 0.03841 | 0.96159 | other |
| CL2001042506AA (testset) | other | 0.01458 | 0.98542 | other |