GO:0007242


GO:0007242

intracellular signaling cascade
(annotated genes)

Biological
Process

Parent node

This leaf node contains 312 genes

The following 16 of these are used in classification:

 SymbolGenenameSQUAMOUS scoreother score
40873_atDVL3 dishevelled, dsh homolog 3 (Drosophila)0.8636-0.0996
32716_atDGKA diacylglycerol kinase, alpha 80kDa0.5959-0.0688
33883_atEFS embryonal Fyn-associated substrate0.3617-0.0417
35301_atCRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like0.2363-0.0273
36524_atARHGEF4 Rho guanine nucleotide exchange factor (GEF) 40.2105-0.0243
1011_s_atYWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide0.2003-0.0231
735_s_atAKAP13 A kinase (PRKA) anchor protein 13-0.17760.0205
1674_atYES1 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 10.1586-0.0183
41579_s_atPRKCI protein kinase C, iota0.1578-0.0182
36139_atC6orf4 chromosome 6 open reading frame 40.1544-0.0178
39416_atTIP-1 Tax interaction protein 10.1524-0.0176
1602_atPRKCI protein kinase C, iota0.1506-0.0174
472_atSTAT5B signal transducer and activator of transcription 5B-0.13660.0158
41795_atNCK1 NCK adaptor protein 10.1214-0.014
1603_g_atPRKCI protein kinase C, iota0.0696-0.008
40575_atDLG5 discs, large homolog 5 (Drosophila)0.006-7e-04

Performance on training data

 SensitivitySpecificity
SQUAMOUS0.809521
other10.80952

Performance on test data

 SensitivitySpecificity
SQUAMOUS0.809521
other10.80952

Predictions

 ClassSQUAMOUSotherPredictionn
CL2001031606AA (testset)SQUAMOUS0.734210.26579 SQUAMOUS
CL2001031607AA (testset)other0.114930.88507 other
CL2001031608AA (testset)other0.02370.9763 other
CL2001031609AA (testset)other0.012190.98781 other
CL2001031611AA (testset)other0.079010.92099 other
CL2001031612AA (testset)other0.165410.83459 other
CL2001031613AA (testset)other0.370790.62921 other
CL2001031615AA (testset)other0.043150.95685 other
CL2001031616AA (testset)other0.101450.89855 other
CL2001031618AA (testset)other0.008120.99188 other
CL2001031620AA (testset)SQUAMOUS0.395610.60439 other
CL2001031621AA (testset)SQUAMOUS0.933390.06661 SQUAMOUS
CL2001031622AA (testset)other0.462530.53747 other
CL2001031625AA (testset)other0.004860.99514 other
CL2001031627AA (testset)other0.009250.99075 other
CL2001031628AA (testset)other0.018670.98133 other
CL2001031629AA (testset)other0.173360.82664 other
CL2001031630AA (testset)other0.002620.99738 other
CL2001031631AA (testset)other0.019030.98097 other
CL2001031632AA (testset)other0.012870.98713 other
CL2001031634AA (testset)other0.00960.9904 other
CL2001031635AA (testset)other0.022170.97783 other
CL2001031636AA (testset)other0.054760.94524 other
CL2001032002AA (testset)other0.004590.99541 other
CL2001032005AA (testset)other0.008380.99162 other
CL2001032008AA (testset)other0.04150.9585 other
CL2001032009AA (testset)other0.009840.99016 other
CL2001032010AA (testset)other0.01690.9831 other
CL2001032011AA (testset)other0.048920.95108 other
CL2001032012AA (testset)other0.009080.99092 other
CL2001032013AA (testset)other0.030230.96977 other
CL2001032015AA (testset)other0.185460.81454 other
CL2001032016AA (testset)other0.010690.98931 other
CL2001032019AA (testset)other0.033770.96623 other
CL2001032020AA (testset)other0.034050.96595 other
CL2001032025AA (testset)other0.025010.97499 other
CL2001032026AA (testset)other0.036560.96344 other
CL2001032027AA (testset)other0.22230.7777 other
CL2001032030AA (testset)other0.131760.86824 other
CL2001032031AA (testset)other0.083490.91651 other
CL2001032032AA (testset)other0.015940.98406 other
CL2001032034AA (testset)other0.092360.90764 other
CL2001032036AA (testset)other0.386070.61393 other
CL2001032041AA (testset)other0.050570.94943 other
CL2001032043AA (testset)other0.040770.95923 other
CL2001032044AA (testset)other0.002210.99779 other
CL2001032045AA (testset)other0.01790.9821 other
CL2001032046AA (testset)other0.026080.97392 other
CL2001032101AA (testset)other0.015440.98456 other
CL2001032102AA (testset)other0.025280.97472 other
CL2001032103AA (testset)other0.004610.99539 other
CL2001032104AA (testset)other0.401760.59824 other
CL2001032105AA (testset)other0.005390.99461 other
CL2001032107AA (testset)other0.014970.98503 other
CL2001032108AA (testset)other0.008320.99168 other
CL2001032109AA (testset)other0.009290.99071 other
CL2001032110AA (testset)other0.042120.95788 other
CL2001032111AA (testset)other0.021830.97817 other
CL2001032113AA (testset)other0.004620.99538 other
CL2001032114AA (testset)other0.015390.98461 other
CL2001032115AA (testset)other0.006160.99384 other
CL2001032116AA (testset)other0.026540.97346 other
CL2001032117AA (testset)other0.076420.92358 other
CL2001032121AA (testset)other0.039740.96026 other
CL2001032122AA (testset)SQUAMOUS0.910820.08918 SQUAMOUS
CL2001032124AA (testset)other0.006630.99337 other
CL2001032125AA (testset)other0.163760.83624 other
CL2001032127AA (testset)other0.007720.99228 other
CL2001032128AA (testset)other0.082980.91702 other
CL2001032129AA (testset)SQUAMOUS0.998850.00115 SQUAMOUS
CL2001032130AA (testset)other0.06580.9342 other
CL2001032132AA (testset)other0.049430.95057 other
CL2001032134AA (testset)other0.202290.79771 other
CL2001032135AA (testset)other0.165670.83433 other
CL2001032136AA (testset)other0.050730.94927 other
CL2001032138AA (testset)other0.034460.96554 other
CL2001032141AA (testset)other0.034740.96526 other
CL2001032142AA (testset)other0.471980.52802 other
CL2001032144AA (testset)SQUAMOUS0.552640.44736 SQUAMOUS
CL2001032145AA (testset)other0.013460.98654 other
CL2001032147AA (testset)other0.054330.94567 other
CL2001032149AA (testset)other0.326160.67384 other
CL2001032151AA (testset)other0.011470.98853 other
CL2001032152AA (testset)other0.006640.99336 other
CL2001032153AA (testset)SQUAMOUS0.540350.45965 SQUAMOUS
CL2001032155AA (testset)other0.216150.78385 other
CL2001032156AA (testset)other0.083230.91677 other
CL2001032202AA (testset)other0.057670.94233 other
CL2001032206AA (testset)other0.038940.96106 other
CL2001032207AA (testset)SQUAMOUS0.965390.03461 SQUAMOUS
CL2001032209AA (testset)SQUAMOUS0.995630.00437 SQUAMOUS
CL2001032210AA (testset)other0.006550.99345 other
CL2001032211AA (testset)other0.082380.91762 other
CL2001032212AA (testset)other0.007130.99287 other
CL2001032213AA (testset)other0.141560.85844 other
CL2001032214AA (testset)other0.126170.87383 other
CL2001032217AA (testset)other0.027660.97234 other
CL2001032218AA (testset)SQUAMOUS0.605890.39411 SQUAMOUS
CL2001032219AA (testset)other0.00740.9926 other
CL2001032220AA (testset)other0.022280.97772 other
CL2001032222AA (testset)SQUAMOUS0.237330.76267 other
CL2001032229AA (testset)other0.013650.98635 other
CL2001032231AA (testset)SQUAMOUS0.450830.54917 other
CL2001032232AA (testset)other0.054510.94549 other
CL2001032233AA (testset)other0.013850.98615 other
CL2001032238AA (testset)other0.004480.99552 other
CL2001032239AA (testset)SQUAMOUS0.617350.38265 SQUAMOUS
CL2001032240AA (testset)SQUAMOUS0.972430.02757 SQUAMOUS
CL2001032241AA (testset)other0.033130.96687 other
CL2001032242AA (testset)other0.136140.86386 other
CL2001032243AA (testset)other0.027550.97245 other
CL2001032248AA (testset)other0.064920.93508 other
CL2001032249AA (testset)other0.027650.97235 other
CL2001032252AA (testset)other0.416960.58304 other
CL2001032254AA (testset)other0.010850.98915 other
CL2001032255AA (testset)other0.053030.94697 other
CL2001032256AA (testset)other0.028280.97172 other
CL2001032259AA (testset)other0.006550.99345 other
CL2001032260AA (testset)other0.031340.96866 other
CL2001032301AA (testset)other0.064840.93516 other
CL2001032304AA (testset)other0.027960.97204 other
CL2001032305AA (testset)SQUAMOUS0.686620.31338 SQUAMOUS
CL2001032306AA (testset)other0.103230.89677 other
CL2001032307AA (testset)other0.074510.92549 other
CL2001032308AA (testset)other0.111830.88817 other
CL2001032309AA (testset)other0.040090.95991 other
CL2001032310AA (testset)other0.020710.97929 other
CL2001032311AA (testset)other0.096070.90393 other
CL2001032312AA (testset)other0.015880.98412 other
CL2001032313AA (testset)other0.018080.98192 other
CL2001032314AA (testset)other0.005220.99478 other
CL2001032316AA (testset)other0.035980.96402 other
CL2001032601AA (testset)other0.152580.84742 other
CL2001032602AA (testset)other0.026290.97371 other
CL2001032604AA (testset)other0.009340.99066 other
CL2001032607AA (testset)other0.004480.99552 other
CL2001032608AA (testset)SQUAMOUS0.871020.12898 SQUAMOUS
CL2001032610AA (testset)other0.006310.99369 other
CL2001032612AA (testset)other0.008440.99156 other
CL2001032613AA (testset)other0.014330.98567 other
CL2001032614AA (testset)other0.011440.98856 other
CL2001032616AA (testset)other0.007930.99207 other
CL2001032617AA (testset)other0.311820.68818 other
CL2001032620AA (testset)other0.038980.96102 other
CL2001032625AA (testset)other0.006460.99354 other
CL2001032627AA (testset)SQUAMOUS0.926590.07341 SQUAMOUS
CL2001032628AA (testset)other0.017670.98233 other
CL2001032629AA (testset)other0.000680.99932 other
CL2001032630AA (testset)other0.0130.987 other
CL2001032632AA (testset)other0.058470.94153 other
CL2001032638AA (testset)other0.027980.97202 other
CL2001032640AA (testset)other0.007260.99274 other
CL2001032643AA (testset)other0.081090.91891 other
CL2001032644AA (testset)SQUAMOUS0.954140.04586 SQUAMOUS
CL2001032647AA (testset)other0.03380.9662 other
CL2001032701AA (testset)other0.007520.99248 other
CL2001032702AA (testset)other0.142010.85799 other
CL2001032703AA (testset)other0.072850.92715 other
CL2001032704AA (testset)other0.072980.92702 other
CL2001032706AA (testset)other0.123730.87627 other
CL2001032709AA (testset)other0.073170.92683 other
CL2001032716AA (testset)other0.116490.88351 other
CL2001032717AA (testset)other0.01350.9865 other
CL2001032718AA (testset)other0.072970.92703 other
CL2001032719AA (testset)SQUAMOUS0.942360.05764 SQUAMOUS
CL2001032720AA (testset)other0.00670.9933 other
CL2001032722AA (testset)other0.009430.99057 other
CL2001032724AA (testset)other0.011760.98824 other
CL2001032725AA (testset)other0.022030.97797 other
CL2001032727AA (testset)other0.023130.97687 other
CL2001032729AA (testset)other0.035690.96431 other
CL2001032730AA (testset)other0.026710.97329 other
CL2001032732AA (testset)SQUAMOUS0.161280.83872 other
CL2001032733AA (testset)other0.026090.97391 other
CL2001032738AA (testset)other0.058210.94179 other
CL2001032742AA (testset)other0.316340.68366 other
CL2001032746AA (testset)other0.059520.94048 other
CL2001032747AA (testset)other0.0570.943 other
CL2001032833AA (testset)other0.041120.95888 other
CL2001032836AA (testset)other0.152040.84796 other
CL2001032838AA (testset)other0.041280.95872 other
CL2001032839AA (testset)other0.046540.95346 other
CL2001032841AA (testset)other0.017440.98256 other
CL2001032842AA (testset)other0.148880.85112 other
CL2001032843AA (testset)other0.101110.89889 other
CL2001032845AA (testset)other0.035150.96485 other
CL2001032846AA (testset)other0.015890.98411 other
CL2001032847AA (testset)other0.007980.99202 other
CL2001032848AA (testset)other0.112220.88778 other
CL2001032850AA (testset)other0.002640.99736 other
CL2001032853AA (testset)SQUAMOUS0.940770.05923 SQUAMOUS
CL2001032854AA (testset)other0.005020.99498 other
CL2001032856AA (testset)other0.055510.94449 other
CL2001032857AA (testset)other0.006120.99388 other
CL2001032860AA (testset)other0.002190.99781 other
CL2001040305AA (testset)other0.009880.99012 other
CL2001040306AA (testset)other0.014650.98535 other
CL2001041708AA (testset)other0.07640.9236 other
CL2001041711AA (testset)other0.007880.99212 other
CL2001041716AA (testset)other0.013280.98672 other
CL2001042501AA (testset)other0.001140.99886 other
CL2001042505AA (testset)other0.022040.97796 other
CL2001042506AA (testset)other0.055230.94477 other

 


Generated by StAM on Tue Sep 7 18:15:24 2004