GO:0007050 | cell cycle arrest | Biological Process |
GO:0000074 | regulation of cell cycle |
---|
The following 67 of these are used in classification:
Symbol | Genename | SQUAMOUS score | other score | |
---|---|---|---|---|
40304_at | BPAG1 | bullous pemphigoid antigen 1, 230/240kDa | 2.4876 | -0.287 |
1599_at | CDKN3 | cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) | 0.8339 | -0.0962 |
31874_at | GAS2L1 | growth arrest-specific 2 like 1 | 0.7656 | -0.0883 |
41162_at | PPM1G | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform | 0.7243 | -0.0836 |
39346_at | KHDRBS1 | KH domain containing, RNA binding, signal transduction associated 1 | 0.6672 | -0.077 |
1973_s_at | MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | 0.6402 | -0.0739 |
37724_at | MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | 0.6361 | -0.0734 |
1713_s_at | CDKN2A | cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) | 0.4917 | -0.0567 |
38123_at | C10orf7 | chromosome 10 open reading frame 7 | 0.4895 | -0.0565 |
1936_s_at | MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | 0.4782 | -0.0552 |
41785_at | EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | 0.423 | -0.0488 |
36943_r_at | PLAGL1 | pleiomorphic adenoma gene-like 1 | 0.4202 | -0.0485 |
34185_at | PCBP4 | poly(rC) binding protein 4 | -0.3848 | 0.0444 |
1101_at | APBB1 | amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) | -0.3717 | 0.0429 |
984_g_at | MAPK12 | mitogen-activated protein kinase 12 | 0.3625 | -0.0418 |
39724_s_at | CUL1 | cullin 1 | 0.3463 | -0.04 |
2034_s_at | CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) | -0.3427 | 0.0395 |
661_at | GAS1 | growth arrest-specific 1 | 0.3064 | -0.0354 |
41600_at | PA2G4 | proliferation-associated 2G4, 38kDa | 0.2885 | -0.0333 |
41497_at | CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) | -0.2856 | 0.033 |
2031_s_at | CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 0.2816 | -0.0325 |
1827_s_at | MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | 0.2752 | -0.0318 |
37894_at | CUL2 | cullin 2 | 0.2707 | -0.0312 |
38673_s_at | CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) | -0.2562 | 0.0296 |
1607_at | CDKN2B | cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) | -0.247 | 0.0285 |
282_at | MPHOSPH1 | M-phase phosphoprotein 1 | 0.234 | -0.027 |
41839_at | GAS1 | growth arrest-specific 1 | 0.2329 | -0.0269 |
1012_at | PCAF | p300/CBP-associated factor | -0.1996 | 0.023 |
1797_at | CDKN2D | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) | 0.1957 | -0.0226 |
40729_s_at | AIF1 | allograft inflammatory factor 1 | -0.1862 | 0.0215 |
33641_g_at | AIF1 | allograft inflammatory factor 1 | -0.1801 | 0.0208 |
36944_f_at | PLAGL1 | pleiomorphic adenoma gene-like 1 | 0.1757 | -0.0203 |
38704_at | MACF1 | microtubule-actin crosslinking factor 1 | -0.1717 | 0.0198 |
33969_at | IFNW1 | interferon, omega 1 | -0.1715 | 0.0198 |
37829_at | GAS2 | growth arrest-specific 2 | -0.1579 | 0.0182 |
35372_r_at | IL8 | interleukin 8 | 0.1461 | -0.0169 |
983_at | MAPK12 | mitogen-activated protein kinase 12 | -0.1448 | 0.0167 |
38544_at | INHA | inhibin, alpha | -0.1432 | 0.0165 |
36238_at | MLLT7 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 | -0.1393 | 0.0161 |
40357_at | INHBA | inhibin, beta A (activin A, activin AB alpha polypeptide) | 0.1386 | -0.016 |
33387_at | GAS7 | growth arrest-specific 7 | 0.1386 | -0.016 |
37028_at | PPP1R15A | protein phosphatase 1, regulatory (inhibitor) subunit 15A | -0.1383 | 0.016 |
40148_at | APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like) | -0.1315 | 0.0152 |
39723_at | CUL1 | cullin 1 | 0.1292 | -0.0149 |
33640_at | AIF1 | allograft inflammatory factor 1 | 0.1234 | -0.0142 |
1911_s_at | GADD45A | growth arrest and DNA-damage-inducible, alpha | 0.1113 | -0.0128 |
32780_at | BPAG1 | bullous pemphigoid antigen 1, 230/240kDa | 0.1072 | -0.0124 |
33847_s_at | CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) | 0.0956 | -0.011 |
1543_at | MAP2K6 | mitogen-activated protein kinase kinase 6 | -0.0918 | 0.0106 |
1787_at | CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) | -0.0848 | 0.0098 |
2014_s_at | MAP2K6 | mitogen-activated protein kinase kinase 6 | 0.0817 | -0.0094 |
36053_at | CDKN2C | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | 0.0813 | -0.0094 |
449_at | CGRRF1 | cell growth regulator with ring finger domain 1 | -0.081 | 0.0094 |
36514_at | CGRRF1 | cell growth regulator with ring finger domain 1 | -0.0715 | 0.0082 |
255_s_at | INHA | inhibin, alpha | -0.0679 | 0.0078 |
470_at | CGREF1 | cell growth regulator with EF hand domain 1 | -0.0676 | 0.0078 |
221_s_at | LOC283431 | hypothetical protein LOC283431 | 0.0632 | -0.0073 |
1203_at | INHBA | inhibin, beta A (activin A, activin AB alpha polypeptide) | -0.0621 | 0.0072 |
37702_at | CUL3 | cullin 3 | 0.0615 | -0.0071 |
450_g_at | CGRRF1 | cell growth regulator with ring finger domain 1 | -0.0546 | 0.0063 |
34186_at | PCBP4 | poly(rC) binding protein 4 | -0.0525 | 0.0061 |
1369_s_at | IL8 | interleukin 8 | 0.0518 | -0.006 |
37011_at | AIF1 | allograft inflammatory factor 1 | -0.0493 | 0.0057 |
33848_r_at | CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) | 0.0176 | -0.002 |
38083_at | NOTCH2 | Notch homolog 2 (Drosophila) | -0.0066 | 8e-04 |
39545_at | CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) | -0.0055 | 6e-04 |
34624_at | CDKN2B | cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) | -0.0014 | 2e-04 |
Sensitivity | Specificity | |
---|---|---|
SQUAMOUS | 0.85714 | 0.98352 |
other | 0.98352 | 0.85714 |
Sensitivity | Specificity | |
---|---|---|
SQUAMOUS | 0.85714 | 0.98352 |
other | 0.98352 | 0.85714 |
Class | SQUAMOUS | other | Predictionn | |
---|---|---|---|---|
CL2001031606AA (testset) | SQUAMOUS | 0.74852 | 0.25148 | SQUAMOUS |
CL2001031607AA (testset) | other | 0.00032 | 0.99968 | other |
CL2001031608AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001031609AA (testset) | other | 0 | 1 | other |
CL2001031611AA (testset) | other | 0.00065 | 0.99935 | other |
CL2001031612AA (testset) | other | 0.21489 | 0.78511 | other |
CL2001031613AA (testset) | other | 0.00285 | 0.99715 | other |
CL2001031615AA (testset) | other | 0.00011 | 0.99989 | other |
CL2001031616AA (testset) | other | 0.00191 | 0.99809 | other |
CL2001031618AA (testset) | other | 0 | 1 | other |
CL2001031620AA (testset) | SQUAMOUS | 0.99214 | 0.00786 | SQUAMOUS |
CL2001031621AA (testset) | SQUAMOUS | 0.99943 | 0.00057 | SQUAMOUS |
CL2001031622AA (testset) | other | 0.52004 | 0.47996 | SQUAMOUS |
CL2001031625AA (testset) | other | 0 | 1 | other |
CL2001031627AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001031628AA (testset) | other | 0.00011 | 0.99989 | other |
CL2001031629AA (testset) | other | 0.00263 | 0.99737 | other |
CL2001031630AA (testset) | other | 0 | 1 | other |
CL2001031631AA (testset) | other | 2e-04 | 0.9998 | other |
CL2001031632AA (testset) | other | 0.00027 | 0.99973 | other |
CL2001031634AA (testset) | other | 0.00093 | 0.99907 | other |
CL2001031635AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001031636AA (testset) | other | 0.08779 | 0.91221 | other |
CL2001032002AA (testset) | other | 0 | 1 | other |
CL2001032005AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032008AA (testset) | other | 0.3518 | 0.6482 | other |
CL2001032009AA (testset) | other | 0.00043 | 0.99957 | other |
CL2001032010AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032011AA (testset) | other | 0.00065 | 0.99935 | other |
CL2001032012AA (testset) | other | 0 | 1 | other |
CL2001032013AA (testset) | other | 0 | 1 | other |
CL2001032015AA (testset) | other | 0.00064 | 0.99936 | other |
CL2001032016AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032019AA (testset) | other | 0.00054 | 0.99946 | other |
CL2001032020AA (testset) | other | 0.00013 | 0.99987 | other |
CL2001032025AA (testset) | other | 0 | 1 | other |
CL2001032026AA (testset) | other | 0 | 1 | other |
CL2001032027AA (testset) | other | 0.00034 | 0.99966 | other |
CL2001032030AA (testset) | other | 5e-05 | 0.99995 | other |
CL2001032031AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001032032AA (testset) | other | 0 | 1 | other |
CL2001032034AA (testset) | other | 0.00014 | 0.99986 | other |
CL2001032036AA (testset) | other | 0.00025 | 0.99975 | other |
CL2001032041AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001032043AA (testset) | other | 9e-05 | 0.99991 | other |
CL2001032044AA (testset) | other | 0 | 1 | other |
CL2001032045AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032046AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032101AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032102AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032103AA (testset) | other | 0 | 1 | other |
CL2001032104AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032105AA (testset) | other | 0.00018 | 0.99982 | other |
CL2001032107AA (testset) | other | 0 | 1 | other |
CL2001032108AA (testset) | other | 0 | 1 | other |
CL2001032109AA (testset) | other | 0 | 1 | other |
CL2001032110AA (testset) | other | 6e-05 | 0.99994 | other |
CL2001032111AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032113AA (testset) | other | 0 | 1 | other |
CL2001032114AA (testset) | other | 0 | 1 | other |
CL2001032115AA (testset) | other | 0 | 1 | other |
CL2001032116AA (testset) | other | 0 | 1 | other |
CL2001032117AA (testset) | other | 0.00115 | 0.99885 | other |
CL2001032121AA (testset) | other | 5e-05 | 0.99995 | other |
CL2001032122AA (testset) | SQUAMOUS | 0.99992 | 8e-05 | SQUAMOUS |
CL2001032124AA (testset) | other | 0 | 1 | other |
CL2001032125AA (testset) | other | 0.01457 | 0.98543 | other |
CL2001032127AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032128AA (testset) | other | 0.00624 | 0.99376 | other |
CL2001032129AA (testset) | SQUAMOUS | 0.99955 | 0.00045 | SQUAMOUS |
CL2001032130AA (testset) | other | 0.00089 | 0.99911 | other |
CL2001032132AA (testset) | other | 0 | 1 | other |
CL2001032134AA (testset) | other | 0.11508 | 0.88492 | other |
CL2001032135AA (testset) | other | 0.00157 | 0.99843 | other |
CL2001032136AA (testset) | other | 0.06158 | 0.93842 | other |
CL2001032138AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032141AA (testset) | other | 0.00197 | 0.99803 | other |
CL2001032142AA (testset) | other | 0.07789 | 0.92211 | other |
CL2001032144AA (testset) | SQUAMOUS | 0.96909 | 0.03091 | SQUAMOUS |
CL2001032145AA (testset) | other | 0 | 1 | other |
CL2001032147AA (testset) | other | 0.00014 | 0.99986 | other |
CL2001032149AA (testset) | other | 0.07898 | 0.92102 | other |
CL2001032151AA (testset) | other | 0 | 1 | other |
CL2001032152AA (testset) | other | 0 | 1 | other |
CL2001032153AA (testset) | SQUAMOUS | 0.99626 | 0.00374 | SQUAMOUS |
CL2001032155AA (testset) | other | 0.18002 | 0.81998 | other |
CL2001032156AA (testset) | other | 0.00297 | 0.99703 | other |
CL2001032202AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032206AA (testset) | other | 0.00113 | 0.99887 | other |
CL2001032207AA (testset) | SQUAMOUS | 0.49258 | 0.50742 | other |
CL2001032209AA (testset) | SQUAMOUS | 1 | 0 | SQUAMOUS |
CL2001032210AA (testset) | other | 0 | 1 | other |
CL2001032211AA (testset) | other | 0.00775 | 0.99225 | other |
CL2001032212AA (testset) | other | 0 | 1 | other |
CL2001032213AA (testset) | other | 0.00023 | 0.99977 | other |
CL2001032214AA (testset) | other | 0.01072 | 0.98928 | other |
CL2001032217AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032218AA (testset) | SQUAMOUS | 0.99955 | 0.00045 | SQUAMOUS |
CL2001032219AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032220AA (testset) | other | 0 | 1 | other |
CL2001032222AA (testset) | SQUAMOUS | 0.99999 | 1e-05 | SQUAMOUS |
CL2001032229AA (testset) | other | 0 | 1 | other |
CL2001032231AA (testset) | SQUAMOUS | 0.99083 | 0.00917 | SQUAMOUS |
CL2001032232AA (testset) | other | 7e-05 | 0.99993 | other |
CL2001032233AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032238AA (testset) | other | 0 | 1 | other |
CL2001032239AA (testset) | SQUAMOUS | 0.00514 | 0.99486 | other |
CL2001032240AA (testset) | SQUAMOUS | 0.98779 | 0.01221 | SQUAMOUS |
CL2001032241AA (testset) | other | 0.00014 | 0.99986 | other |
CL2001032242AA (testset) | other | 0.01282 | 0.98718 | other |
CL2001032243AA (testset) | other | 0 | 1 | other |
CL2001032248AA (testset) | other | 0.00463 | 0.99537 | other |
CL2001032249AA (testset) | other | 0 | 1 | other |
CL2001032252AA (testset) | other | 0.8833 | 0.1167 | SQUAMOUS |
CL2001032254AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032255AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001032256AA (testset) | other | 0.00253 | 0.99747 | other |
CL2001032259AA (testset) | other | 0 | 1 | other |
CL2001032260AA (testset) | other | 7e-05 | 0.99993 | other |
CL2001032301AA (testset) | other | 0.00142 | 0.99858 | other |
CL2001032304AA (testset) | other | 0.00013 | 0.99987 | other |
CL2001032305AA (testset) | SQUAMOUS | 0.96373 | 0.03627 | SQUAMOUS |
CL2001032306AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001032307AA (testset) | other | 2e-04 | 0.9998 | other |
CL2001032308AA (testset) | other | 0.15687 | 0.84313 | other |
CL2001032309AA (testset) | other | 0 | 1 | other |
CL2001032310AA (testset) | other | 0 | 1 | other |
CL2001032311AA (testset) | other | 0.97959 | 0.02041 | SQUAMOUS |
CL2001032312AA (testset) | other | 0.00014 | 0.99986 | other |
CL2001032313AA (testset) | other | 0 | 1 | other |
CL2001032314AA (testset) | other | 0.00011 | 0.99989 | other |
CL2001032316AA (testset) | other | 0.01601 | 0.98399 | other |
CL2001032601AA (testset) | other | 3e-04 | 0.9997 | other |
CL2001032602AA (testset) | other | 0 | 1 | other |
CL2001032604AA (testset) | other | 0 | 1 | other |
CL2001032607AA (testset) | other | 0 | 1 | other |
CL2001032608AA (testset) | SQUAMOUS | 0.99523 | 0.00477 | SQUAMOUS |
CL2001032610AA (testset) | other | 0.0011 | 0.9989 | other |
CL2001032612AA (testset) | other | 1e-04 | 0.9999 | other |
CL2001032613AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032614AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032616AA (testset) | other | 0 | 1 | other |
CL2001032617AA (testset) | other | 2e-05 | 0.99998 | other |
CL2001032620AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032625AA (testset) | other | 0 | 1 | other |
CL2001032627AA (testset) | SQUAMOUS | 0.99895 | 0.00105 | SQUAMOUS |
CL2001032628AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032629AA (testset) | other | 0 | 1 | other |
CL2001032630AA (testset) | other | 0 | 1 | other |
CL2001032632AA (testset) | other | 5e-05 | 0.99995 | other |
CL2001032638AA (testset) | other | 0.00023 | 0.99977 | other |
CL2001032640AA (testset) | other | 0 | 1 | other |
CL2001032643AA (testset) | other | 0.12546 | 0.87454 | other |
CL2001032644AA (testset) | SQUAMOUS | 0.99998 | 2e-05 | SQUAMOUS |
CL2001032647AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032701AA (testset) | other | 0 | 1 | other |
CL2001032702AA (testset) | other | 0.00122 | 0.99878 | other |
CL2001032703AA (testset) | other | 0.0772 | 0.9228 | other |
CL2001032704AA (testset) | other | 0.00043 | 0.99957 | other |
CL2001032706AA (testset) | other | 0.00029 | 0.99971 | other |
CL2001032709AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032716AA (testset) | other | 0.00229 | 0.99771 | other |
CL2001032717AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032718AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032719AA (testset) | SQUAMOUS | 0.99993 | 7e-05 | SQUAMOUS |
CL2001032720AA (testset) | other | 0.00023 | 0.99977 | other |
CL2001032722AA (testset) | other | 0 | 1 | other |
CL2001032724AA (testset) | other | 0 | 1 | other |
CL2001032725AA (testset) | other | 0 | 1 | other |
CL2001032727AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001032729AA (testset) | other | 1e-04 | 0.9999 | other |
CL2001032730AA (testset) | other | 1e-05 | 0.99999 | other |
CL2001032732AA (testset) | SQUAMOUS | 0.00369 | 0.99631 | other |
CL2001032733AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032738AA (testset) | other | 0.00364 | 0.99636 | other |
CL2001032742AA (testset) | other | 0.00277 | 0.99723 | other |
CL2001032746AA (testset) | other | 0.01773 | 0.98227 | other |
CL2001032747AA (testset) | other | 0.00023 | 0.99977 | other |
CL2001032833AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032836AA (testset) | other | 0.23745 | 0.76255 | other |
CL2001032838AA (testset) | other | 3e-04 | 0.9997 | other |
CL2001032839AA (testset) | other | 8e-05 | 0.99992 | other |
CL2001032841AA (testset) | other | 0 | 1 | other |
CL2001032842AA (testset) | other | 4e-05 | 0.99996 | other |
CL2001032843AA (testset) | other | 0 | 1 | other |
CL2001032845AA (testset) | other | 0 | 1 | other |
CL2001032846AA (testset) | other | 3e-05 | 0.99997 | other |
CL2001032847AA (testset) | other | 0 | 1 | other |
CL2001032848AA (testset) | other | 0.00522 | 0.99478 | other |
CL2001032850AA (testset) | other | 0 | 1 | other |
CL2001032853AA (testset) | SQUAMOUS | 0.99972 | 0.00028 | SQUAMOUS |
CL2001032854AA (testset) | other | 0 | 1 | other |
CL2001032856AA (testset) | other | 0 | 1 | other |
CL2001032857AA (testset) | other | 6e-05 | 0.99994 | other |
CL2001032860AA (testset) | other | 0 | 1 | other |
CL2001040305AA (testset) | other | 0.00325 | 0.99675 | other |
CL2001040306AA (testset) | other | 0 | 1 | other |
CL2001041708AA (testset) | other | 0.00012 | 0.99988 | other |
CL2001041711AA (testset) | other | 0 | 1 | other |
CL2001041716AA (testset) | other | 0.00371 | 0.99629 | other |
CL2001042501AA (testset) | other | 0 | 1 | other |
CL2001042505AA (testset) | other | 0.00018 | 0.99982 | other |
CL2001042506AA (testset) | other | 0.0013 | 0.9987 | other |