GO:0007050


GO:0007050

cell cycle arrest
(annotated genes)

Biological
Process

Parent node

This leaf node contains 67 genes

The following 67 of these are used in classification:

 SymbolGenenameSQUAMOUS scoreother score
40304_atBPAG1 bullous pemphigoid antigen 1, 230/240kDa2.4876-0.287
1599_atCDKN3 cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase)0.8339-0.0962
31874_atGAS2L1 growth arrest-specific 2 like 10.7656-0.0883
41162_atPPM1G protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform0.7243-0.0836
39346_atKHDRBS1 KH domain containing, RNA binding, signal transduction associated 10.6672-0.077
1973_s_atMYC v-myc myelocytomatosis viral oncogene homolog (avian)0.6402-0.0739
37724_atMYC v-myc myelocytomatosis viral oncogene homolog (avian)0.6361-0.0734
1713_s_atCDKN2A cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)0.4917-0.0567
38123_atC10orf7 chromosome 10 open reading frame 70.4895-0.0565
1936_s_atMYC v-myc myelocytomatosis viral oncogene homolog (avian)0.4782-0.0552
41785_atEIF4G2 eukaryotic translation initiation factor 4 gamma, 20.423-0.0488
36943_r_atPLAGL1 pleiomorphic adenoma gene-like 10.4202-0.0485
34185_atPCBP4 poly(rC) binding protein 4-0.38480.0444
1101_atAPBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)-0.37170.0429
984_g_atMAPK12 mitogen-activated protein kinase 120.3625-0.0418
39724_s_atCUL1 cullin 10.3463-0.04
2034_s_atCDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)-0.34270.0395
661_atGAS1 growth arrest-specific 10.3064-0.0354
41600_atPA2G4 proliferation-associated 2G4, 38kDa0.2885-0.0333
41497_atCDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)-0.28560.033
2031_s_atCDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)0.2816-0.0325
1827_s_atMYC v-myc myelocytomatosis viral oncogene homolog (avian)0.2752-0.0318
37894_atCUL2 cullin 20.2707-0.0312
38673_s_atCDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)-0.25620.0296
1607_atCDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)-0.2470.0285
282_atMPHOSPH1 M-phase phosphoprotein 10.234-0.027
41839_atGAS1 growth arrest-specific 10.2329-0.0269
1012_atPCAF p300/CBP-associated factor-0.19960.023
1797_atCDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)0.1957-0.0226
40729_s_atAIF1 allograft inflammatory factor 1-0.18620.0215
33641_g_atAIF1 allograft inflammatory factor 1-0.18010.0208
36944_f_atPLAGL1 pleiomorphic adenoma gene-like 10.1757-0.0203
38704_atMACF1 microtubule-actin crosslinking factor 1-0.17170.0198
33969_atIFNW1 interferon, omega 1-0.17150.0198
37829_atGAS2 growth arrest-specific 2-0.15790.0182
35372_r_atIL8 interleukin 80.1461-0.0169
983_atMAPK12 mitogen-activated protein kinase 12-0.14480.0167
38544_atINHA inhibin, alpha-0.14320.0165
36238_atMLLT7 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7-0.13930.0161
40357_atINHBA inhibin, beta A (activin A, activin AB alpha polypeptide)0.1386-0.016
33387_atGAS7 growth arrest-specific 70.1386-0.016
37028_atPPP1R15A protein phosphatase 1, regulatory (inhibitor) subunit 15A-0.13830.016
40148_atAPBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like)-0.13150.0152
39723_atCUL1 cullin 10.1292-0.0149
33640_atAIF1 allograft inflammatory factor 10.1234-0.0142
1911_s_atGADD45A growth arrest and DNA-damage-inducible, alpha0.1113-0.0128
32780_atBPAG1 bullous pemphigoid antigen 1, 230/240kDa0.1072-0.0124
33847_s_atCDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)0.0956-0.011
1543_atMAP2K6 mitogen-activated protein kinase kinase 6-0.09180.0106
1787_atCDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)-0.08480.0098
2014_s_atMAP2K6 mitogen-activated protein kinase kinase 60.0817-0.0094
36053_atCDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)0.0813-0.0094
449_atCGRRF1 cell growth regulator with ring finger domain 1-0.0810.0094
36514_atCGRRF1 cell growth regulator with ring finger domain 1-0.07150.0082
255_s_atINHA inhibin, alpha-0.06790.0078
470_atCGREF1 cell growth regulator with EF hand domain 1-0.06760.0078
221_s_atLOC283431 hypothetical protein LOC2834310.0632-0.0073
1203_atINHBA inhibin, beta A (activin A, activin AB alpha polypeptide)-0.06210.0072
37702_atCUL3 cullin 30.0615-0.0071
450_g_atCGRRF1 cell growth regulator with ring finger domain 1-0.05460.0063
34186_atPCBP4 poly(rC) binding protein 4-0.05250.0061
1369_s_atIL8 interleukin 80.0518-0.006
37011_atAIF1 allograft inflammatory factor 1-0.04930.0057
33848_r_atCDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)0.0176-0.002
38083_atNOTCH2 Notch homolog 2 (Drosophila)-0.00668e-04
39545_atCDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)-0.00556e-04
34624_atCDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)-0.00142e-04

Performance on training data

 SensitivitySpecificity
SQUAMOUS0.857140.98352
other0.983520.85714

Performance on test data

 SensitivitySpecificity
SQUAMOUS0.857140.98352
other0.983520.85714

Predictions

 ClassSQUAMOUSotherPredictionn
CL2001031606AA (testset)SQUAMOUS0.748520.25148 SQUAMOUS
CL2001031607AA (testset)other0.000320.99968 other
CL2001031608AA (testset)other1e-050.99999 other
CL2001031609AA (testset)other01 other
CL2001031611AA (testset)other0.000650.99935 other
CL2001031612AA (testset)other0.214890.78511 other
CL2001031613AA (testset)other0.002850.99715 other
CL2001031615AA (testset)other0.000110.99989 other
CL2001031616AA (testset)other0.001910.99809 other
CL2001031618AA (testset)other01 other
CL2001031620AA (testset)SQUAMOUS0.992140.00786 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS0.999430.00057 SQUAMOUS
CL2001031622AA (testset)other0.520040.47996 SQUAMOUS
CL2001031625AA (testset)other01 other
CL2001031627AA (testset)other1e-050.99999 other
CL2001031628AA (testset)other0.000110.99989 other
CL2001031629AA (testset)other0.002630.99737 other
CL2001031630AA (testset)other01 other
CL2001031631AA (testset)other2e-040.9998 other
CL2001031632AA (testset)other0.000270.99973 other
CL2001031634AA (testset)other0.000930.99907 other
CL2001031635AA (testset)other1e-050.99999 other
CL2001031636AA (testset)other0.087790.91221 other
CL2001032002AA (testset)other01 other
CL2001032005AA (testset)other2e-050.99998 other
CL2001032008AA (testset)other0.35180.6482 other
CL2001032009AA (testset)other0.000430.99957 other
CL2001032010AA (testset)other1e-050.99999 other
CL2001032011AA (testset)other0.000650.99935 other
CL2001032012AA (testset)other01 other
CL2001032013AA (testset)other01 other
CL2001032015AA (testset)other0.000640.99936 other
CL2001032016AA (testset)other1e-050.99999 other
CL2001032019AA (testset)other0.000540.99946 other
CL2001032020AA (testset)other0.000130.99987 other
CL2001032025AA (testset)other01 other
CL2001032026AA (testset)other01 other
CL2001032027AA (testset)other0.000340.99966 other
CL2001032030AA (testset)other5e-050.99995 other
CL2001032031AA (testset)other0.000120.99988 other
CL2001032032AA (testset)other01 other
CL2001032034AA (testset)other0.000140.99986 other
CL2001032036AA (testset)other0.000250.99975 other
CL2001032041AA (testset)other0.000120.99988 other
CL2001032043AA (testset)other9e-050.99991 other
CL2001032044AA (testset)other01 other
CL2001032045AA (testset)other4e-050.99996 other
CL2001032046AA (testset)other1e-050.99999 other
CL2001032101AA (testset)other1e-050.99999 other
CL2001032102AA (testset)other3e-050.99997 other
CL2001032103AA (testset)other01 other
CL2001032104AA (testset)other2e-050.99998 other
CL2001032105AA (testset)other0.000180.99982 other
CL2001032107AA (testset)other01 other
CL2001032108AA (testset)other01 other
CL2001032109AA (testset)other01 other
CL2001032110AA (testset)other6e-050.99994 other
CL2001032111AA (testset)other1e-050.99999 other
CL2001032113AA (testset)other01 other
CL2001032114AA (testset)other01 other
CL2001032115AA (testset)other01 other
CL2001032116AA (testset)other01 other
CL2001032117AA (testset)other0.001150.99885 other
CL2001032121AA (testset)other5e-050.99995 other
CL2001032122AA (testset)SQUAMOUS0.999928e-05 SQUAMOUS
CL2001032124AA (testset)other01 other
CL2001032125AA (testset)other0.014570.98543 other
CL2001032127AA (testset)other1e-050.99999 other
CL2001032128AA (testset)other0.006240.99376 other
CL2001032129AA (testset)SQUAMOUS0.999550.00045 SQUAMOUS
CL2001032130AA (testset)other0.000890.99911 other
CL2001032132AA (testset)other01 other
CL2001032134AA (testset)other0.115080.88492 other
CL2001032135AA (testset)other0.001570.99843 other
CL2001032136AA (testset)other0.061580.93842 other
CL2001032138AA (testset)other4e-050.99996 other
CL2001032141AA (testset)other0.001970.99803 other
CL2001032142AA (testset)other0.077890.92211 other
CL2001032144AA (testset)SQUAMOUS0.969090.03091 SQUAMOUS
CL2001032145AA (testset)other01 other
CL2001032147AA (testset)other0.000140.99986 other
CL2001032149AA (testset)other0.078980.92102 other
CL2001032151AA (testset)other01 other
CL2001032152AA (testset)other01 other
CL2001032153AA (testset)SQUAMOUS0.996260.00374 SQUAMOUS
CL2001032155AA (testset)other0.180020.81998 other
CL2001032156AA (testset)other0.002970.99703 other
CL2001032202AA (testset)other2e-050.99998 other
CL2001032206AA (testset)other0.001130.99887 other
CL2001032207AA (testset)SQUAMOUS0.492580.50742 other
CL2001032209AA (testset)SQUAMOUS10 SQUAMOUS
CL2001032210AA (testset)other01 other
CL2001032211AA (testset)other0.007750.99225 other
CL2001032212AA (testset)other01 other
CL2001032213AA (testset)other0.000230.99977 other
CL2001032214AA (testset)other0.010720.98928 other
CL2001032217AA (testset)other2e-050.99998 other
CL2001032218AA (testset)SQUAMOUS0.999550.00045 SQUAMOUS
CL2001032219AA (testset)other1e-050.99999 other
CL2001032220AA (testset)other01 other
CL2001032222AA (testset)SQUAMOUS0.999991e-05 SQUAMOUS
CL2001032229AA (testset)other01 other
CL2001032231AA (testset)SQUAMOUS0.990830.00917 SQUAMOUS
CL2001032232AA (testset)other7e-050.99993 other
CL2001032233AA (testset)other3e-050.99997 other
CL2001032238AA (testset)other01 other
CL2001032239AA (testset)SQUAMOUS0.005140.99486 other
CL2001032240AA (testset)SQUAMOUS0.987790.01221 SQUAMOUS
CL2001032241AA (testset)other0.000140.99986 other
CL2001032242AA (testset)other0.012820.98718 other
CL2001032243AA (testset)other01 other
CL2001032248AA (testset)other0.004630.99537 other
CL2001032249AA (testset)other01 other
CL2001032252AA (testset)other0.88330.1167 SQUAMOUS
CL2001032254AA (testset)other1e-050.99999 other
CL2001032255AA (testset)other0.000120.99988 other
CL2001032256AA (testset)other0.002530.99747 other
CL2001032259AA (testset)other01 other
CL2001032260AA (testset)other7e-050.99993 other
CL2001032301AA (testset)other0.001420.99858 other
CL2001032304AA (testset)other0.000130.99987 other
CL2001032305AA (testset)SQUAMOUS0.963730.03627 SQUAMOUS
CL2001032306AA (testset)other0.000120.99988 other
CL2001032307AA (testset)other2e-040.9998 other
CL2001032308AA (testset)other0.156870.84313 other
CL2001032309AA (testset)other01 other
CL2001032310AA (testset)other01 other
CL2001032311AA (testset)other0.979590.02041 SQUAMOUS
CL2001032312AA (testset)other0.000140.99986 other
CL2001032313AA (testset)other01 other
CL2001032314AA (testset)other0.000110.99989 other
CL2001032316AA (testset)other0.016010.98399 other
CL2001032601AA (testset)other3e-040.9997 other
CL2001032602AA (testset)other01 other
CL2001032604AA (testset)other01 other
CL2001032607AA (testset)other01 other
CL2001032608AA (testset)SQUAMOUS0.995230.00477 SQUAMOUS
CL2001032610AA (testset)other0.00110.9989 other
CL2001032612AA (testset)other1e-040.9999 other
CL2001032613AA (testset)other3e-050.99997 other
CL2001032614AA (testset)other2e-050.99998 other
CL2001032616AA (testset)other01 other
CL2001032617AA (testset)other2e-050.99998 other
CL2001032620AA (testset)other1e-050.99999 other
CL2001032625AA (testset)other01 other
CL2001032627AA (testset)SQUAMOUS0.998950.00105 SQUAMOUS
CL2001032628AA (testset)other4e-050.99996 other
CL2001032629AA (testset)other01 other
CL2001032630AA (testset)other01 other
CL2001032632AA (testset)other5e-050.99995 other
CL2001032638AA (testset)other0.000230.99977 other
CL2001032640AA (testset)other01 other
CL2001032643AA (testset)other0.125460.87454 other
CL2001032644AA (testset)SQUAMOUS0.999982e-05 SQUAMOUS
CL2001032647AA (testset)other3e-050.99997 other
CL2001032701AA (testset)other01 other
CL2001032702AA (testset)other0.001220.99878 other
CL2001032703AA (testset)other0.07720.9228 other
CL2001032704AA (testset)other0.000430.99957 other
CL2001032706AA (testset)other0.000290.99971 other
CL2001032709AA (testset)other4e-050.99996 other
CL2001032716AA (testset)other0.002290.99771 other
CL2001032717AA (testset)other1e-050.99999 other
CL2001032718AA (testset)other4e-050.99996 other
CL2001032719AA (testset)SQUAMOUS0.999937e-05 SQUAMOUS
CL2001032720AA (testset)other0.000230.99977 other
CL2001032722AA (testset)other01 other
CL2001032724AA (testset)other01 other
CL2001032725AA (testset)other01 other
CL2001032727AA (testset)other0.000120.99988 other
CL2001032729AA (testset)other1e-040.9999 other
CL2001032730AA (testset)other1e-050.99999 other
CL2001032732AA (testset)SQUAMOUS0.003690.99631 other
CL2001032733AA (testset)other4e-050.99996 other
CL2001032738AA (testset)other0.003640.99636 other
CL2001032742AA (testset)other0.002770.99723 other
CL2001032746AA (testset)other0.017730.98227 other
CL2001032747AA (testset)other0.000230.99977 other
CL2001032833AA (testset)other3e-050.99997 other
CL2001032836AA (testset)other0.237450.76255 other
CL2001032838AA (testset)other3e-040.9997 other
CL2001032839AA (testset)other8e-050.99992 other
CL2001032841AA (testset)other01 other
CL2001032842AA (testset)other4e-050.99996 other
CL2001032843AA (testset)other01 other
CL2001032845AA (testset)other01 other
CL2001032846AA (testset)other3e-050.99997 other
CL2001032847AA (testset)other01 other
CL2001032848AA (testset)other0.005220.99478 other
CL2001032850AA (testset)other01 other
CL2001032853AA (testset)SQUAMOUS0.999720.00028 SQUAMOUS
CL2001032854AA (testset)other01 other
CL2001032856AA (testset)other01 other
CL2001032857AA (testset)other6e-050.99994 other
CL2001032860AA (testset)other01 other
CL2001040305AA (testset)other0.003250.99675 other
CL2001040306AA (testset)other01 other
CL2001041708AA (testset)other0.000120.99988 other
CL2001041711AA (testset)other01 other
CL2001041716AA (testset)other0.003710.99629 other
CL2001042501AA (testset)other01 other
CL2001042505AA (testset)other0.000180.99982 other
CL2001042506AA (testset)other0.00130.9987 other

 


Generated by StAM on Tue Sep 7 18:15:21 2004