GO:0006936 | muscle contraction | Biological Process |
| GO:0006936 | muscle contraction |
|---|
The following 52 of these are used in classification:
| Symbol | Genename | SQUAMOUS score | other score | |
|---|---|---|---|---|
| 33642_s_at | SLC6A8 | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | 0.9147 | -0.1055 |
| 32243_g_at | CRYAB | crystallin, alpha B | 0.5656 | -0.0653 |
| 39050_at | PABPN1 | poly(A) binding protein, nuclear 1 | 0.4745 | -0.0548 |
| 39624_at | LTB4R | leukotriene B4 receptor | 0.4629 | -0.0534 |
| 38975_at | GENX-3414 | genethonin 1 | -0.4581 | 0.0529 |
| 32242_at | CRYAB | crystallin, alpha B | 0.453 | -0.0523 |
| 35239_at | EMD | emerin (Emery-Dreifuss muscular dystrophy) | 0.4426 | -0.0511 |
| 37997_r_at | DMPK | dystrophia myotonica-protein kinase | -0.4327 | 0.0499 |
| 37529_at | CACNA1H | calcium channel, voltage-dependent, alpha 1H subunit | -0.4141 | 0.0478 |
| 32109_at | FXYD1 | FXYD domain containing ion transport regulator 1 (phospholemman) | -0.3635 | 0.0419 |
| 33766_at | VIPR1 | vasoactive intestinal peptide receptor 1 | -0.3445 | 0.0398 |
| 36424_at | NEBL | nebulette | -0.3098 | 0.0357 |
| 41738_at | CALD1 | caldesmon 1 | 0.3042 | -0.0351 |
| 37990_at | RYR1 | ryanodine receptor 1 (skeletal) | 0.3036 | -0.035 |
| 35027_at | CHRNB1 | cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) | -0.2953 | 0.0341 |
| 36426_g_at | NEBL | nebulette | -0.2925 | 0.0337 |
| 36989_at | DAG1 | dystroglycan 1 (dystrophin-associated glycoprotein 1) | -0.2758 | 0.0318 |
| 37996_s_at | DMPK | dystrophia myotonica-protein kinase | 0.2365 | -0.0273 |
| 34873_at | NEBL | nebulette | -0.2356 | 0.0272 |
| 40527_at | KCNQ1 | potassium voltage-gated channel, KQT-like subfamily, member 1 | -0.2277 | 0.0263 |
| 41730_at | MYL3 | myosin, light polypeptide 3, alkali; ventricular, skeletal, slow | -0.225 | 0.026 |
| 38858_at | KCNH2 | potassium voltage-gated channel, subfamily H (eag-related), member 2 | -0.2081 | 0.024 |
| 33939_at | KCNA1 | potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) | -0.203 | 0.0234 |
| 35627_at | SNTA1 | syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component) | -0.1911 | 0.0221 |
| 33545_at | SCN4A | sodium channel, voltage-gated, type IV, alpha | -0.1907 | 0.022 |
| 31638_at | GAMT | guanidinoacetate N-methyltransferase | 0.1862 | -0.0215 |
| 34143_at | CHRNA1 | cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) | -0.1837 | 0.0212 |
| 36425_at | NEBL | nebulette | -0.18 | 0.0208 |
| 34678_at | FER1L3 | fer-1-like 3, myoferlin (C. elegans) | 0.1376 | -0.0159 |
| 336_at | TBXA2R | thromboxane A2 receptor | -0.1365 | 0.0157 |
| 355_s_at | FKBP1B | FK506 binding protein 1B, 12.6 kDa | -0.1335 | 0.0154 |
| 38734_at | PLN | phospholamban | -0.1304 | 0.015 |
| 35335_at | ROCK2 | Rho-associated, coiled-coil containing protein kinase 2 | -0.1296 | 0.0149 |
| 37592_at | CKMT2 | creatine kinase, mitochondrial 2 (sarcomeric) | -0.1209 | 0.0139 |
| 31554_at | CHRND | cholinergic receptor, nicotinic, delta polypeptide | -0.114 | 0.0131 |
| 32920_at | HCN4 | hyperpolarization activated cyclic nucleotide-gated potassium channel 4 | -0.1125 | 0.013 |
| 41731_g_at | MYL3 | myosin, light polypeptide 3, alkali; ventricular, skeletal, slow | -0.1077 | 0.0124 |
| 33041_at | GJA7 | gap junction protein, alpha 7, 45kDa (connexin 45) | 0.102 | -0.0118 |
| 38225_at | KCNH2 | potassium voltage-gated channel, subfamily H (eag-related), member 2 | -0.0957 | 0.011 |
| 33303_at | SSPN | sarcospan (Kras oncogene-associated gene) | 0.0923 | -0.0107 |
| 32077_s_at | KCNQ1 | potassium voltage-gated channel, KQT-like subfamily, member 1 | -0.0915 | 0.0106 |
| 32495_at | CLCN1 | chloride channel 1, skeletal muscle (Thomsen disease, autosomal dominant) | -0.0841 | 0.0097 |
| 39834_at | CHRNE | cholinergic receptor, nicotinic, epsilon polypeptide | -0.0763 | 0.0088 |
| 38263_at | RYR2 | ryanodine receptor 2 (cardiac) | -0.0749 | 0.0086 |
| 31737_at | ACTA1 | actin, alpha 1, skeletal muscle | -0.0701 | 0.0081 |
| 41390_at | UTRN | utrophin (homologous to dystrophin) | 0.068 | -0.0078 |
| 33567_at | VIP | vasoactive intestinal peptide | 0.061 | -0.007 |
| 32496_at | KCNE1 | potassium voltage-gated channel, Isk-related family, member 1 | -0.0601 | 0.0069 |
| 33302_at | SSPN | sarcospan (Kras oncogene-associated gene) | -0.039 | 0.0045 |
| 31905_at | GALR2 | galanin receptor 2 | -0.0295 | 0.0034 |
| 39063_at | ACTC | actin, alpha, cardiac muscle | 0.026 | -0.003 |
| 40488_at | DMD | dystrophin (muscular dystrophy, Duchenne and Becker types) | 0.0227 | -0.0026 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.57143 | 0.98901 |
| other | 0.98901 | 0.57143 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.57143 | 0.98901 |
| other | 0.98901 | 0.57143 |
| Class | SQUAMOUS | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 0.17868 | 0.82132 | other |
| CL2001031607AA (testset) | other | 0.1653 | 0.8347 | other |
| CL2001031608AA (testset) | other | 0.0273 | 0.9727 | other |
| CL2001031609AA (testset) | other | 0.007 | 0.993 | other |
| CL2001031611AA (testset) | other | 0.44103 | 0.55897 | other |
| CL2001031612AA (testset) | other | 0.05812 | 0.94188 | other |
| CL2001031613AA (testset) | other | 0.159 | 0.841 | other |
| CL2001031615AA (testset) | other | 0.02143 | 0.97857 | other |
| CL2001031616AA (testset) | other | 0.04766 | 0.95234 | other |
| CL2001031618AA (testset) | other | 0.00057 | 0.99943 | other |
| CL2001031620AA (testset) | SQUAMOUS | 0.42788 | 0.57212 | other |
| CL2001031621AA (testset) | SQUAMOUS | 0.73746 | 0.26254 | SQUAMOUS |
| CL2001031622AA (testset) | other | 0.1278 | 0.8722 | other |
| CL2001031625AA (testset) | other | 0.00234 | 0.99766 | other |
| CL2001031627AA (testset) | other | 0.002 | 0.998 | other |
| CL2001031628AA (testset) | other | 0.00141 | 0.99859 | other |
| CL2001031629AA (testset) | other | 0.09252 | 0.90748 | other |
| CL2001031630AA (testset) | other | 0.00066 | 0.99934 | other |
| CL2001031631AA (testset) | other | 0.02411 | 0.97589 | other |
| CL2001031632AA (testset) | other | 0.0766 | 0.9234 | other |
| CL2001031634AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001031635AA (testset) | other | 0.0095 | 0.9905 | other |
| CL2001031636AA (testset) | other | 0.11207 | 0.88793 | other |
| CL2001032002AA (testset) | other | 4e-04 | 0.9996 | other |
| CL2001032005AA (testset) | other | 0.00525 | 0.99475 | other |
| CL2001032008AA (testset) | other | 0.02276 | 0.97724 | other |
| CL2001032009AA (testset) | other | 0.036 | 0.964 | other |
| CL2001032010AA (testset) | other | 0.00218 | 0.99782 | other |
| CL2001032011AA (testset) | other | 0.00356 | 0.99644 | other |
| CL2001032012AA (testset) | other | 0.00272 | 0.99728 | other |
| CL2001032013AA (testset) | other | 0.02127 | 0.97873 | other |
| CL2001032015AA (testset) | other | 0.01258 | 0.98742 | other |
| CL2001032016AA (testset) | other | 0.00044 | 0.99956 | other |
| CL2001032019AA (testset) | other | 0.00514 | 0.99486 | other |
| CL2001032020AA (testset) | other | 0.00137 | 0.99863 | other |
| CL2001032025AA (testset) | other | 0.00268 | 0.99732 | other |
| CL2001032026AA (testset) | other | 0.01106 | 0.98894 | other |
| CL2001032027AA (testset) | other | 0.02874 | 0.97126 | other |
| CL2001032030AA (testset) | other | 0.02646 | 0.97354 | other |
| CL2001032031AA (testset) | other | 0.01286 | 0.98714 | other |
| CL2001032032AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001032034AA (testset) | other | 0.06722 | 0.93278 | other |
| CL2001032036AA (testset) | other | 0.57488 | 0.42512 | SQUAMOUS |
| CL2001032041AA (testset) | other | 0.01293 | 0.98707 | other |
| CL2001032043AA (testset) | other | 0.00622 | 0.99378 | other |
| CL2001032044AA (testset) | other | 0.00045 | 0.99955 | other |
| CL2001032045AA (testset) | other | 0.00488 | 0.99512 | other |
| CL2001032046AA (testset) | other | 0.00402 | 0.99598 | other |
| CL2001032101AA (testset) | other | 0.00293 | 0.99707 | other |
| CL2001032102AA (testset) | other | 0.00285 | 0.99715 | other |
| CL2001032103AA (testset) | other | 0.00517 | 0.99483 | other |
| CL2001032104AA (testset) | other | 0.00212 | 0.99788 | other |
| CL2001032105AA (testset) | other | 0.00313 | 0.99687 | other |
| CL2001032107AA (testset) | other | 0.00785 | 0.99215 | other |
| CL2001032108AA (testset) | other | 0.00305 | 0.99695 | other |
| CL2001032109AA (testset) | other | 0.00095 | 0.99905 | other |
| CL2001032110AA (testset) | other | 0.00896 | 0.99104 | other |
| CL2001032111AA (testset) | other | 0.00127 | 0.99873 | other |
| CL2001032113AA (testset) | other | 0.00076 | 0.99924 | other |
| CL2001032114AA (testset) | other | 0.01038 | 0.98962 | other |
| CL2001032115AA (testset) | other | 0.00237 | 0.99763 | other |
| CL2001032116AA (testset) | other | 0.00223 | 0.99777 | other |
| CL2001032117AA (testset) | other | 0.00823 | 0.99177 | other |
| CL2001032121AA (testset) | other | 0.02074 | 0.97926 | other |
| CL2001032122AA (testset) | SQUAMOUS | 0.19762 | 0.80238 | other |
| CL2001032124AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032125AA (testset) | other | 0.90704 | 0.09296 | SQUAMOUS |
| CL2001032127AA (testset) | other | 0.00306 | 0.99694 | other |
| CL2001032128AA (testset) | other | 0.01406 | 0.98594 | other |
| CL2001032129AA (testset) | SQUAMOUS | 0.95578 | 0.04422 | SQUAMOUS |
| CL2001032130AA (testset) | other | 0.01772 | 0.98228 | other |
| CL2001032132AA (testset) | other | 0.00656 | 0.99344 | other |
| CL2001032134AA (testset) | other | 0.07675 | 0.92325 | other |
| CL2001032135AA (testset) | other | 0.08872 | 0.91128 | other |
| CL2001032136AA (testset) | other | 0.02204 | 0.97796 | other |
| CL2001032138AA (testset) | other | 0.02427 | 0.97573 | other |
| CL2001032141AA (testset) | other | 0.01929 | 0.98071 | other |
| CL2001032142AA (testset) | other | 0.0589 | 0.9411 | other |
| CL2001032144AA (testset) | SQUAMOUS | 0.90978 | 0.09022 | SQUAMOUS |
| CL2001032145AA (testset) | other | 0.00095 | 0.99905 | other |
| CL2001032147AA (testset) | other | 0.01176 | 0.98824 | other |
| CL2001032149AA (testset) | other | 0.1231 | 0.8769 | other |
| CL2001032151AA (testset) | other | 0.00406 | 0.99594 | other |
| CL2001032152AA (testset) | other | 0.00283 | 0.99717 | other |
| CL2001032153AA (testset) | SQUAMOUS | 0.544 | 0.456 | SQUAMOUS |
| CL2001032155AA (testset) | other | 0.21367 | 0.78633 | other |
| CL2001032156AA (testset) | other | 0.05053 | 0.94947 | other |
| CL2001032202AA (testset) | other | 0.00374 | 0.99626 | other |
| CL2001032206AA (testset) | other | 0.03 | 0.97 | other |
| CL2001032207AA (testset) | SQUAMOUS | 0.39942 | 0.60058 | other |
| CL2001032209AA (testset) | SQUAMOUS | 0.98194 | 0.01806 | SQUAMOUS |
| CL2001032210AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001032211AA (testset) | other | 0.00961 | 0.99039 | other |
| CL2001032212AA (testset) | other | 0.0042 | 0.9958 | other |
| CL2001032213AA (testset) | other | 0.1062 | 0.8938 | other |
| CL2001032214AA (testset) | other | 0.06806 | 0.93194 | other |
| CL2001032217AA (testset) | other | 0.00537 | 0.99463 | other |
| CL2001032218AA (testset) | SQUAMOUS | 0.30365 | 0.69635 | other |
| CL2001032219AA (testset) | other | 0.00359 | 0.99641 | other |
| CL2001032220AA (testset) | other | 0.00461 | 0.99539 | other |
| CL2001032222AA (testset) | SQUAMOUS | 0.60016 | 0.39984 | SQUAMOUS |
| CL2001032229AA (testset) | other | 0.00305 | 0.99695 | other |
| CL2001032231AA (testset) | SQUAMOUS | 0.38542 | 0.61458 | other |
| CL2001032232AA (testset) | other | 0.00124 | 0.99876 | other |
| CL2001032233AA (testset) | other | 0.00365 | 0.99635 | other |
| CL2001032238AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001032239AA (testset) | SQUAMOUS | 0.32715 | 0.67285 | other |
| CL2001032240AA (testset) | SQUAMOUS | 0.72734 | 0.27266 | SQUAMOUS |
| CL2001032241AA (testset) | other | 0.00144 | 0.99856 | other |
| CL2001032242AA (testset) | other | 0.048 | 0.952 | other |
| CL2001032243AA (testset) | other | 0.00447 | 0.99553 | other |
| CL2001032248AA (testset) | other | 0.0022 | 0.9978 | other |
| CL2001032249AA (testset) | other | 0.00146 | 0.99854 | other |
| CL2001032252AA (testset) | other | 0.43588 | 0.56412 | other |
| CL2001032254AA (testset) | other | 0.00233 | 0.99767 | other |
| CL2001032255AA (testset) | other | 0.01301 | 0.98699 | other |
| CL2001032256AA (testset) | other | 0.00953 | 0.99047 | other |
| CL2001032259AA (testset) | other | 0.19552 | 0.80448 | other |
| CL2001032260AA (testset) | other | 0.04846 | 0.95154 | other |
| CL2001032301AA (testset) | other | 0.04596 | 0.95404 | other |
| CL2001032304AA (testset) | other | 0.00853 | 0.99147 | other |
| CL2001032305AA (testset) | SQUAMOUS | 0.07545 | 0.92455 | other |
| CL2001032306AA (testset) | other | 0.0215 | 0.9785 | other |
| CL2001032307AA (testset) | other | 0.04804 | 0.95196 | other |
| CL2001032308AA (testset) | other | 0.02841 | 0.97159 | other |
| CL2001032309AA (testset) | other | 0.00281 | 0.99719 | other |
| CL2001032310AA (testset) | other | 0.00876 | 0.99124 | other |
| CL2001032311AA (testset) | other | 0.01295 | 0.98705 | other |
| CL2001032312AA (testset) | other | 0.01141 | 0.98859 | other |
| CL2001032313AA (testset) | other | 0.01939 | 0.98061 | other |
| CL2001032314AA (testset) | other | 0.00469 | 0.99531 | other |
| CL2001032316AA (testset) | other | 0.00381 | 0.99619 | other |
| CL2001032601AA (testset) | other | 0.00614 | 0.99386 | other |
| CL2001032602AA (testset) | other | 0.00294 | 0.99706 | other |
| CL2001032604AA (testset) | other | 0.007 | 0.993 | other |
| CL2001032607AA (testset) | other | 0.00232 | 0.99768 | other |
| CL2001032608AA (testset) | SQUAMOUS | 0.71466 | 0.28534 | SQUAMOUS |
| CL2001032610AA (testset) | other | 0.00419 | 0.99581 | other |
| CL2001032612AA (testset) | other | 0.01089 | 0.98911 | other |
| CL2001032613AA (testset) | other | 0.00533 | 0.99467 | other |
| CL2001032614AA (testset) | other | 0.04871 | 0.95129 | other |
| CL2001032616AA (testset) | other | 0.01235 | 0.98765 | other |
| CL2001032617AA (testset) | other | 0.0269 | 0.9731 | other |
| CL2001032620AA (testset) | other | 0.00632 | 0.99368 | other |
| CL2001032625AA (testset) | other | 0.00385 | 0.99615 | other |
| CL2001032627AA (testset) | SQUAMOUS | 0.9599 | 0.0401 | SQUAMOUS |
| CL2001032628AA (testset) | other | 0.00385 | 0.99615 | other |
| CL2001032629AA (testset) | other | 0.00081 | 0.99919 | other |
| CL2001032630AA (testset) | other | 8e-04 | 0.9992 | other |
| CL2001032632AA (testset) | other | 0.01674 | 0.98326 | other |
| CL2001032638AA (testset) | other | 0.00158 | 0.99842 | other |
| CL2001032640AA (testset) | other | 0.0036 | 0.9964 | other |
| CL2001032643AA (testset) | other | 0.03231 | 0.96769 | other |
| CL2001032644AA (testset) | SQUAMOUS | 0.81923 | 0.18077 | SQUAMOUS |
| CL2001032647AA (testset) | other | 0.00818 | 0.99182 | other |
| CL2001032701AA (testset) | other | 0.00478 | 0.99522 | other |
| CL2001032702AA (testset) | other | 0.00659 | 0.99341 | other |
| CL2001032703AA (testset) | other | 0.02231 | 0.97769 | other |
| CL2001032704AA (testset) | other | 0.25495 | 0.74505 | other |
| CL2001032706AA (testset) | other | 0.00835 | 0.99165 | other |
| CL2001032709AA (testset) | other | 0.09672 | 0.90328 | other |
| CL2001032716AA (testset) | other | 0.07414 | 0.92586 | other |
| CL2001032717AA (testset) | other | 0.00206 | 0.99794 | other |
| CL2001032718AA (testset) | other | 0.01361 | 0.98639 | other |
| CL2001032719AA (testset) | SQUAMOUS | 0.73908 | 0.26092 | SQUAMOUS |
| CL2001032720AA (testset) | other | 0.01144 | 0.98856 | other |
| CL2001032722AA (testset) | other | 0.00157 | 0.99843 | other |
| CL2001032724AA (testset) | other | 0.0032 | 0.9968 | other |
| CL2001032725AA (testset) | other | 0.00187 | 0.99813 | other |
| CL2001032727AA (testset) | other | 0.0068 | 0.9932 | other |
| CL2001032729AA (testset) | other | 0.01524 | 0.98476 | other |
| CL2001032730AA (testset) | other | 0.01528 | 0.98472 | other |
| CL2001032732AA (testset) | SQUAMOUS | 0.19552 | 0.80448 | other |
| CL2001032733AA (testset) | other | 0.00083 | 0.99917 | other |
| CL2001032738AA (testset) | other | 0.02956 | 0.97044 | other |
| CL2001032742AA (testset) | other | 0.08973 | 0.91027 | other |
| CL2001032746AA (testset) | other | 0.00992 | 0.99008 | other |
| CL2001032747AA (testset) | other | 0.02464 | 0.97536 | other |
| CL2001032833AA (testset) | other | 0.00526 | 0.99474 | other |
| CL2001032836AA (testset) | other | 0.03804 | 0.96196 | other |
| CL2001032838AA (testset) | other | 0.04752 | 0.95248 | other |
| CL2001032839AA (testset) | other | 0.01663 | 0.98337 | other |
| CL2001032841AA (testset) | other | 0.00087 | 0.99913 | other |
| CL2001032842AA (testset) | other | 0.01279 | 0.98721 | other |
| CL2001032843AA (testset) | other | 0.00804 | 0.99196 | other |
| CL2001032845AA (testset) | other | 0.01633 | 0.98367 | other |
| CL2001032846AA (testset) | other | 0.01647 | 0.98353 | other |
| CL2001032847AA (testset) | other | 0.00116 | 0.99884 | other |
| CL2001032848AA (testset) | other | 0.02291 | 0.97709 | other |
| CL2001032850AA (testset) | other | 0.00021 | 0.99979 | other |
| CL2001032853AA (testset) | SQUAMOUS | 0.99916 | 0.00084 | SQUAMOUS |
| CL2001032854AA (testset) | other | 0.0022 | 0.9978 | other |
| CL2001032856AA (testset) | other | 0.01502 | 0.98498 | other |
| CL2001032857AA (testset) | other | 0.00477 | 0.99523 | other |
| CL2001032860AA (testset) | other | 0.0145 | 0.9855 | other |
| CL2001040305AA (testset) | other | 0.04155 | 0.95845 | other |
| CL2001040306AA (testset) | other | 0.00139 | 0.99861 | other |
| CL2001041708AA (testset) | other | 0.02746 | 0.97254 | other |
| CL2001041711AA (testset) | other | 0.0014 | 0.9986 | other |
| CL2001041716AA (testset) | other | 0.00359 | 0.99641 | other |
| CL2001042501AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001042505AA (testset) | other | 0.0061 | 0.9939 | other |
| CL2001042506AA (testset) | other | 0.01761 | 0.98239 | other |