GO:0006935


GO:0006935

chemotaxis
(annotated genes)

Biological
Process

Parent node

This leaf node contains 109 genes

The following 96 of these are used in classification:

 SymbolGenenameSQUAMOUS scoreother score
1590_s_atHRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog0.9451-0.109
37095_r_atFPRL1 formyl peptide receptor-like 1-0.76920.0888
35701_atHRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog0.6756-0.0779
1877_g_atRALA v-ral simian leukemia viral oncogene homolog A (ras related)0.6047-0.0698
39253_s_atRALA v-ral simian leukemia viral oncogene homolog A (ras related)0.5612-0.0648
408_atCXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)0.4971-0.0574
458_atCCR6 chemokine (C-C motif) receptor 6-0.45810.0529
40599_atIL16 interleukin 16 (lymphocyte chemoattractant factor)-0.4570.0527
37149_s_atCCR2 chemokine (C-C motif) receptor 20.4239-0.0489
37187_atCXCL2 chemokine (C-X-C motif) ligand 2-0.39310.0454
32068_atC3AR1 complement component 3a receptor 1-0.38340.0442
177_atPLD1 phospholipase D1, phophatidylcholine-specific0.3805-0.0439
33765_atCXCL2 chemokine (C-X-C motif) ligand 2-0.37380.0431
31496_g_atXCL2 chemokine (C motif) ligand 20.3689-0.0426
37816_atC5 complement component 5-0.35360.0408
823_atCX3CL1 chemokine (C-X3-C motif) ligand 10.3508-0.0405
35410_atCXCL6 chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)0.3438-0.0397
34375_atCCL2 chemokine (C-C motif) ligand 2-0.32860.0379
36879_atECGF1 endothelial cell growth factor 1 (platelet-derived)0.3161-0.0365
1876_atRALA v-ral simian leukemia viral oncogene homolog A (ras related)0.3107-0.0358
37310_atPLAU plasminogen activator, urokinase0.3063-0.0353
875_g_atCCL2 chemokine (C-C motif) ligand 2-0.29290.0338
41169_atPLAUR plasminogen activator, urokinase receptor-0.28980.0334
31495_atXCL2 chemokine (C motif) ligand 2-0.28890.0333
649_s_atCXCR4 chemokine (C-X-C motif) receptor 40.2882-0.0333
1353_g_atIL8RA interleukin 8 receptor, alpha-0.28310.0327
1128_s_atCCR1 chemokine (C-C motif) receptor 1-0.25370.0293
1665_s_atECGF1 endothelial cell growth factor 1 (platelet-derived)0.2533-0.0292
874_atCCL2 chemokine (C-C motif) ligand 2-0.23950.0276
41123_s_atENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)-0.23370.027
41104_atCXCL13 chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)0.2313-0.0267
39802_atCCL7 chemokine (C-C motif) ligand 7-0.22440.0259
37454_atCCL13 chemokine (C-C motif) ligand 13-0.22220.0256
36797_atSPN sialophorin (gpL115, leukosialin, CD43)-0.21850.0252
976_s_atMAPK1 mitogen-activated protein kinase 10.2139-0.0247
41297_atMAN1A2 mannosidase, alpha, class 1A, member 2-0.20830.024
1056_s_atIL16 interleukin 16 (lymphocyte chemoattractant factor)-0.20490.0236
189_s_atPLAUR plasminogen activator, urokinase receptor-0.20480.0236
41124_r_atENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)-0.19330.0223
431_atCXCL10 chemokine (C-X-C motif) ligand 100.1865-0.0215
39994_atCCR1 chemokine (C-C motif) receptor 1-0.1830.0211
39938_g_atCCR2 chemokine (C-C motif) receptor 2-0.18290.0211
34434_atCCL16 chemokine (C-C motif) ligand 16-0.18030.0208
33981_atIL4 interleukin 4-0.17920.0207
1574_s_atIL4 interleukin 40.1766-0.0204
36103_atCCL3 chemokine (C-C motif) ligand 3-0.1720.0198
1183_atCCL17 chemokine (C-C motif) ligand 17-0.17030.0197
1032_atIL8RB interleukin 8 receptor, beta0.1678-0.0194
1999_s_atMAPK14 mitogen-activated protein kinase 14-0.1650.019
34041_atCCL22 chemokine (C-C motif) ligand 220.1628-0.0188
34077_atCXCR3 chemokine (C-X-C motif) receptor 30.1625-0.0188
40646_atCX3CR1 chemokine (C-X3-C motif) receptor 1-0.15910.0184
37219_atCXCL9 chemokine (C-X-C motif) ligand 90.1587-0.0183
1033_g_atIL8RB interleukin 8 receptor, beta-0.15560.018
33834_atCXCL12 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)0.1542-0.0178
38772_atCYR61 cysteine-rich, angiogenic inducer, 61-0.15070.0174
32484_atCCBP2 chemokine binding protein 20.1402-0.0162
33098_atCCR3 chemokine (C-C motif) receptor 3-0.13810.0159
36724_s_atCCR2 chemokine (C-C motif) receptor 2-0.13060.0151
41298_atMAN1A2 mannosidase, alpha, class 1A, member 2-0.13030.015
39208_i_atPPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)-0.12560.0145
39936_atCCR2 chemokine (C-C motif) receptor 2-0.12330.0142
31644_atCCL27 chemokine (C-C motif) ligand 27-0.1190.0137
35372_r_atIL8 interleukin 80.1185-0.0137
35061_atCXCL11 chemokine (C-X-C motif) ligand 11-0.11850.0137
36766_atRNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)-0.110.0127
1671_s_atMAPK14 mitogen-activated protein kinase 140.1017-0.0117
37823_atCCL8 chemokine (C-C motif) ligand 8-0.09740.0112
1405_i_atCCL5 chemokine (C-C motif) ligand 50.0965-0.0111
1403_s_atCCL5 chemokine (C-C motif) ligand 50.095-0.011
31699_atPIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide0.0933-0.0108
36674_atCCL4 chemokine (C-C motif) ligand 4-0.08760.0101
36919_r_atFPR1 formyl peptide receptor 10.0862-0.0099
33092_atFPRL2 formyl peptide receptor-like 2-0.07970.0092
39937_atCCR2 chemokine (C-C motif) receptor 2-0.07670.0089
1163_atPIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide0.0762-0.0088
33158_atKAL1 Kallmann syndrome 1 sequence-0.07610.0088
1097_s_atCCR7 chemokine (C-C motif) receptor 70.0761-0.0088
32464_atDEFB4 defensin, beta 40.0714-0.0082
36390_atCMKLR1 chemokine-like receptor 10.0648-0.0075
40008_atCCL11 chemokine (C-C motif) ligand 110.0642-0.0074
1352_atIL8RA interleukin 8 receptor, alpha0.0604-0.007
40385_atCCL20 chemokine (C-C motif) ligand 200.0603-0.007
39734_atSCYE1 small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating)-0.04810.0055
341_atPTAFR platelet-activating factor receptor-0.04320.005
33963_atAZU1 azurocidin 1 (cationic antimicrobial protein 37)-0.03650.0042
37733_atMAPK14 mitogen-activated protein kinase 140.03-0.0035
32128_atCCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)-0.02890.0033
36798_g_atSPN sialophorin (gpL115, leukosialin, CD43)-0.02730.0032
664_atIL8RB interleukin 8 receptor, beta-0.02260.0026
32271_atFOSL1 FOS-like antigen 10.0222-0.0026
1369_s_atIL8 interleukin 80.0203-0.0023
41125_r_atENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)0.0171-0.002
33553_r_atCCR6 chemokine (C-C motif) receptor 6-0.01680.0019
36796_atSPN sialophorin (gpL115, leukosialin, CD43)0.0163-0.0019
39209_r_atPPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)-0.00223e-04

Performance on training data

 SensitivitySpecificity
SQUAMOUS0.76190.98901
other0.989010.7619

Performance on test data

 SensitivitySpecificity
SQUAMOUS0.76190.98901
other0.989010.7619

Predictions

 ClassSQUAMOUSotherPredictionn
CL2001031606AA (testset)SQUAMOUS0.641970.35803 SQUAMOUS
CL2001031607AA (testset)other0.000140.99986 other
CL2001031608AA (testset)other0.000350.99965 other
CL2001031609AA (testset)other0.000130.99987 other
CL2001031611AA (testset)other0.044070.95593 other
CL2001031612AA (testset)other0.00440.9956 other
CL2001031613AA (testset)other0.049970.95003 other
CL2001031615AA (testset)other0.001480.99852 other
CL2001031616AA (testset)other0.00230.9977 other
CL2001031618AA (testset)other0.000110.99989 other
CL2001031620AA (testset)SQUAMOUS0.999010.00099 SQUAMOUS
CL2001031621AA (testset)SQUAMOUS0.920420.07958 SQUAMOUS
CL2001031622AA (testset)other0.095210.90479 other
CL2001031625AA (testset)other0.000150.99985 other
CL2001031627AA (testset)other0.000360.99964 other
CL2001031628AA (testset)other0.005020.99498 other
CL2001031629AA (testset)other0.366190.63381 other
CL2001031630AA (testset)other1e-050.99999 other
CL2001031631AA (testset)other0.023670.97633 other
CL2001031632AA (testset)other0.001320.99868 other
CL2001031634AA (testset)other8e-050.99992 other
CL2001031635AA (testset)other0.000270.99973 other
CL2001031636AA (testset)other0.019540.98046 other
CL2001032002AA (testset)other3e-050.99997 other
CL2001032005AA (testset)other0.007550.99245 other
CL2001032008AA (testset)other0.04320.9568 other
CL2001032009AA (testset)other0.003150.99685 other
CL2001032010AA (testset)other6e-050.99994 other
CL2001032011AA (testset)other0.000650.99935 other
CL2001032012AA (testset)other0.004410.99559 other
CL2001032013AA (testset)other9e-050.99991 other
CL2001032015AA (testset)other0.003130.99687 other
CL2001032016AA (testset)other0.007080.99292 other
CL2001032019AA (testset)other0.037910.96209 other
CL2001032020AA (testset)other0.00960.9904 other
CL2001032025AA (testset)other7e-050.99993 other
CL2001032026AA (testset)other0.000120.99988 other
CL2001032027AA (testset)other0.219690.78031 other
CL2001032030AA (testset)other0.151150.84885 other
CL2001032031AA (testset)other0.004370.99563 other
CL2001032032AA (testset)other0.000140.99986 other
CL2001032034AA (testset)other0.002280.99772 other
CL2001032036AA (testset)other0.005240.99476 other
CL2001032041AA (testset)other0.000180.99982 other
CL2001032043AA (testset)other0.003990.99601 other
CL2001032044AA (testset)other0.000130.99987 other
CL2001032045AA (testset)other0.000110.99989 other
CL2001032046AA (testset)other8e-040.9992 other
CL2001032101AA (testset)other0.000740.99926 other
CL2001032102AA (testset)other0.000110.99989 other
CL2001032103AA (testset)other5e-050.99995 other
CL2001032104AA (testset)other0.000460.99954 other
CL2001032105AA (testset)other0.002890.99711 other
CL2001032107AA (testset)other0.000480.99952 other
CL2001032108AA (testset)other0.001760.99824 other
CL2001032109AA (testset)other2e-050.99998 other
CL2001032110AA (testset)other0.000250.99975 other
CL2001032111AA (testset)other0.004610.99539 other
CL2001032113AA (testset)other0.072410.92759 other
CL2001032114AA (testset)other0.002330.99767 other
CL2001032115AA (testset)other1e-050.99999 other
CL2001032116AA (testset)other0.000280.99972 other
CL2001032117AA (testset)other0.014590.98541 other
CL2001032121AA (testset)other0.100440.89956 other
CL2001032122AA (testset)SQUAMOUS0.905680.09432 SQUAMOUS
CL2001032124AA (testset)other0.000950.99905 other
CL2001032125AA (testset)other0.011050.98895 other
CL2001032127AA (testset)other0.000980.99902 other
CL2001032128AA (testset)other0.000110.99989 other
CL2001032129AA (testset)SQUAMOUS0.976910.02309 SQUAMOUS
CL2001032130AA (testset)other0.040620.95938 other
CL2001032132AA (testset)other0.000620.99938 other
CL2001032134AA (testset)other0.163310.83669 other
CL2001032135AA (testset)other0.061180.93882 other
CL2001032136AA (testset)other0.001150.99885 other
CL2001032138AA (testset)other0.019990.98001 other
CL2001032141AA (testset)other0.028350.97165 other
CL2001032142AA (testset)other0.037230.96277 other
CL2001032144AA (testset)SQUAMOUS0.999982e-05 SQUAMOUS
CL2001032145AA (testset)other2e-050.99998 other
CL2001032147AA (testset)other0.000460.99954 other
CL2001032149AA (testset)other0.035370.96463 other
CL2001032151AA (testset)other0.000470.99953 other
CL2001032152AA (testset)other2e-050.99998 other
CL2001032153AA (testset)SQUAMOUS0.749410.25059 SQUAMOUS
CL2001032155AA (testset)other0.001160.99884 other
CL2001032156AA (testset)other0.021480.97852 other
CL2001032202AA (testset)other0.001490.99851 other
CL2001032206AA (testset)other0.000170.99983 other
CL2001032207AA (testset)SQUAMOUS0.391950.60805 other
CL2001032209AA (testset)SQUAMOUS0.993890.00611 SQUAMOUS
CL2001032210AA (testset)other0.001780.99822 other
CL2001032211AA (testset)other0.047260.95274 other
CL2001032212AA (testset)other0.000140.99986 other
CL2001032213AA (testset)other0.003160.99684 other
CL2001032214AA (testset)other0.010580.98942 other
CL2001032217AA (testset)other0.009340.99066 other
CL2001032218AA (testset)SQUAMOUS0.991430.00857 SQUAMOUS
CL2001032219AA (testset)other0.001450.99855 other
CL2001032220AA (testset)other5e-050.99995 other
CL2001032222AA (testset)SQUAMOUS0.980650.01935 SQUAMOUS
CL2001032229AA (testset)other0.002770.99723 other
CL2001032231AA (testset)SQUAMOUS0.839190.16081 SQUAMOUS
CL2001032232AA (testset)other0.002150.99785 other
CL2001032233AA (testset)other0.003670.99633 other
CL2001032238AA (testset)other0.000150.99985 other
CL2001032239AA (testset)SQUAMOUS0.038940.96106 other
CL2001032240AA (testset)SQUAMOUS0.996570.00343 SQUAMOUS
CL2001032241AA (testset)other0.001580.99842 other
CL2001032242AA (testset)other0.005760.99424 other
CL2001032243AA (testset)other0.000980.99902 other
CL2001032248AA (testset)other0.096620.90338 other
CL2001032249AA (testset)other0.000370.99963 other
CL2001032252AA (testset)other0.987130.01287 SQUAMOUS
CL2001032254AA (testset)other0.001030.99897 other
CL2001032255AA (testset)other0.005450.99455 other
CL2001032256AA (testset)other1e-050.99999 other
CL2001032259AA (testset)other0.000130.99987 other
CL2001032260AA (testset)other0.00270.9973 other
CL2001032301AA (testset)other0.129960.87004 other
CL2001032304AA (testset)other0.000220.99978 other
CL2001032305AA (testset)SQUAMOUS0.131320.86868 other
CL2001032306AA (testset)other0.002720.99728 other
CL2001032307AA (testset)other0.005520.99448 other
CL2001032308AA (testset)other0.019770.98023 other
CL2001032309AA (testset)other0.001280.99872 other
CL2001032310AA (testset)other6e-050.99994 other
CL2001032311AA (testset)other0.906830.09317 SQUAMOUS
CL2001032312AA (testset)other0.000360.99964 other
CL2001032313AA (testset)other0.000530.99947 other
CL2001032314AA (testset)other9e-040.9991 other
CL2001032316AA (testset)other0.000580.99942 other
CL2001032601AA (testset)other0.002530.99747 other
CL2001032602AA (testset)other0.000730.99927 other
CL2001032604AA (testset)other0.002570.99743 other
CL2001032607AA (testset)other0.000440.99956 other
CL2001032608AA (testset)SQUAMOUS0.954930.04507 SQUAMOUS
CL2001032610AA (testset)other0.00120.9988 other
CL2001032612AA (testset)other7e-050.99993 other
CL2001032613AA (testset)other0.000470.99953 other
CL2001032614AA (testset)other0.001590.99841 other
CL2001032616AA (testset)other0.000430.99957 other
CL2001032617AA (testset)other0.003470.99653 other
CL2001032620AA (testset)other0.000520.99948 other
CL2001032625AA (testset)other0.000270.99973 other
CL2001032627AA (testset)SQUAMOUS0.99973e-04 SQUAMOUS
CL2001032628AA (testset)other0.001650.99835 other
CL2001032629AA (testset)other5e-050.99995 other
CL2001032630AA (testset)other0.002910.99709 other
CL2001032632AA (testset)other0.049860.95014 other
CL2001032638AA (testset)other0.005560.99444 other
CL2001032640AA (testset)other8e-050.99992 other
CL2001032643AA (testset)other0.149690.85031 other
CL2001032644AA (testset)SQUAMOUS0.820120.17988 SQUAMOUS
CL2001032647AA (testset)other7e-050.99993 other
CL2001032701AA (testset)other0.001040.99896 other
CL2001032702AA (testset)other0.19640.8036 other
CL2001032703AA (testset)other0.022650.97735 other
CL2001032704AA (testset)other0.063420.93658 other
CL2001032706AA (testset)other0.002850.99715 other
CL2001032709AA (testset)other0.008090.99191 other
CL2001032716AA (testset)other0.00430.9957 other
CL2001032717AA (testset)other6e-050.99994 other
CL2001032718AA (testset)other0.000560.99944 other
CL2001032719AA (testset)SQUAMOUS0.99790.0021 SQUAMOUS
CL2001032720AA (testset)other0.003150.99685 other
CL2001032722AA (testset)other0.002010.99799 other
CL2001032724AA (testset)other6e-050.99994 other
CL2001032725AA (testset)other0.00390.9961 other
CL2001032727AA (testset)other8e-050.99992 other
CL2001032729AA (testset)other0.000610.99939 other
CL2001032730AA (testset)other0.001610.99839 other
CL2001032732AA (testset)SQUAMOUS0.039770.96023 other
CL2001032733AA (testset)other0.000450.99955 other
CL2001032738AA (testset)other0.126250.87375 other
CL2001032742AA (testset)other0.053790.94621 other
CL2001032746AA (testset)other0.044790.95521 other
CL2001032747AA (testset)other0.002330.99767 other
CL2001032833AA (testset)other0.000630.99937 other
CL2001032836AA (testset)other0.043590.95641 other
CL2001032838AA (testset)other0.021420.97858 other
CL2001032839AA (testset)other0.053210.94679 other
CL2001032841AA (testset)other7e-050.99993 other
CL2001032842AA (testset)other0.001830.99817 other
CL2001032843AA (testset)other6e-040.9994 other
CL2001032845AA (testset)other4e-050.99996 other
CL2001032846AA (testset)other0.000680.99932 other
CL2001032847AA (testset)other0.000130.99987 other
CL2001032848AA (testset)other1e-040.9999 other
CL2001032850AA (testset)other3e-050.99997 other
CL2001032853AA (testset)SQUAMOUS0.420680.57932 other
CL2001032854AA (testset)other9e-050.99991 other
CL2001032856AA (testset)other0.003010.99699 other
CL2001032857AA (testset)other4e-050.99996 other
CL2001032860AA (testset)other0.003250.99675 other
CL2001040305AA (testset)other0.002140.99786 other
CL2001040306AA (testset)other0.000230.99977 other
CL2001041708AA (testset)other2e-040.9998 other
CL2001041711AA (testset)other2e-050.99998 other
CL2001041716AA (testset)other0.000260.99974 other
CL2001042501AA (testset)other1e-050.99999 other
CL2001042505AA (testset)other0.001270.99873 other
CL2001042506AA (testset)other0.001020.99898 other

 


Generated by StAM on Tue Sep 7 18:15:04 2004