GO:0006629 | lipid metabolism | Biological Process |
| GO:0006629 | lipid metabolism |
|---|
The following 45 of these are used in classification:
| Symbol | Genename | SQUAMOUS score | other score | |
|---|---|---|---|---|
| 39799_at | FABP5 | fatty acid binding protein 5 (psoriasis-associated) | 0.8065 | -0.0931 |
| 37956_at | ALDH3B2 | aldehyde dehydrogenase 3 family, member B2 | 0.7352 | -0.0848 |
| 40685_at | ALDH3B1 | aldehyde dehydrogenase 3 family, member B1 | -0.4792 | 0.0553 |
| 35454_at | KIAA0450 | KIAA0450 gene product | 0.4374 | -0.0505 |
| 37399_at | AKR1C3 | aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) | 0.3684 | -0.0425 |
| 40081_at | PLTP | phospholipid transfer protein | 0.3483 | -0.0402 |
| 34790_at | ACAT2 | acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) | 0.347 | -0.04 |
| 40372_at | PNLIPRP1 | pancreatic lipase-related protein 1 | -0.3082 | 0.0356 |
| 32398_s_at | LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor | 0.2757 | -0.0318 |
| 34422_r_at | UCP3 | uncoupling protein 3 (mitochondrial, proton carrier) | -0.2703 | 0.0312 |
| 35009_at | LRP2 | low density lipoprotein-related protein 2 | -0.256 | 0.0295 |
| 40703_at | RBP3 | retinol binding protein 3, interstitial | -0.2509 | 0.029 |
| 40012_at | LRP8 | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor | 0.2422 | -0.0279 |
| 34517_at | HMGCS1 | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) | 0.219 | -0.0253 |
| 32135_at | SREBF1 | sterol regulatory element binding transcription factor 1 | 0.2174 | -0.0251 |
| 31645_at | BTNL3 | butyrophilin-like 3 | -0.2038 | 0.0235 |
| 39062_at | PTE1 | peroxisomal acyl-CoA thioesterase | -0.1733 | 0.02 |
| 33634_at | ATP8B1 | ATPase, Class I, type 8B, member 1 | 0.1663 | -0.0192 |
| 37945_at | BACH | brain acyl-CoA hydrolase | 0.1645 | -0.019 |
| 35511_at | C11orf11 | chromosome 11 open reading frame 11 | -0.1535 | 0.0177 |
| 40330_at | PLCE1 | phospholipase C, epsilon 1 | -0.1532 | 0.0177 |
| 38313_at | ABCA2 | ATP-binding cassette, sub-family A (ABC1), member 2 | -0.1375 | 0.0159 |
| 32630_f_at | BTN3A1 | butyrophilin, subfamily 3, member A1 | -0.1277 | 0.0147 |
| 35875_at | SGPL1 | sphingosine-1-phosphate lyase 1 | -0.1247 | 0.0144 |
| 37104_at | PPARG | peroxisome proliferative activated receptor, gamma | -0.1186 | 0.0137 |
| 40778_at | HADH2 | hydroxyacyl-Coenzyme A dehydrogenase, type II | 0.1021 | -0.0118 |
| 36779_at | FABP6 | fatty acid binding protein 6, ileal (gastrotropin) | -0.0994 | 0.0115 |
| 40452_at | CPNE1 | copine I | 0.088 | -0.0102 |
| 918_at | ABCA2 | ATP-binding cassette, sub-family A (ABC1), member 2 | -0.0869 | 0.01 |
| 39706_at | CPNE3 | copine III | 0.0745 | -0.0086 |
| 35296_at | GGPS1 | geranylgeranyl diphosphate synthase 1 | 0.0552 | -0.0064 |
| 41796_at | PLCL2 | phospholipase C-like 2 | -0.0479 | 0.0055 |
| 40295_at | CPNE6 | copine VI (neuronal) | 0.0464 | -0.0053 |
| 35099_at | APOL1 | apolipoprotein L, 1 | 0.046 | -0.0053 |
| 41227_at | OCRL | oculocerebrorenal syndrome of Lowe | -0.046 | 0.0053 |
| 36964_at | MBTPS1 | membrane-bound transcription factor protease, site 1 | -0.039 | 0.0045 |
| 364_s_at | PLCB3 | phospholipase C, beta 3 (phosphatidylinositol-specific) | 0.0277 | -0.0032 |
| 34523_at | APOA4 | apolipoprotein A-IV | -0.0214 | 0.0025 |
| 759_at | PTGIS | prostaglandin I2 (prostacyclin) synthase | -0.0137 | 0.0016 |
| 34420_at | UCP3 | uncoupling protein 3 (mitochondrial, proton carrier) | -0.0117 | 0.0014 |
| 31725_s_at | ABCA2 | ATP-binding cassette, sub-family A (ABC1), member 2 | -0.0079 | 9e-04 |
| 36686_at | ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 | 0.0069 | -8e-04 |
| 36681_at | APOD | apolipoprotein D | -0.0032 | 4e-04 |
| 32363_at | CH25H | cholesterol 25-hydroxylase | -5e-04 | 1e-04 |
| 40218_at | CDS1 | CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 | 1e-04 | 0 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.80952 | 1 |
| other | 1 | 0.80952 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.80952 | 1 |
| other | 1 | 0.80952 |
| Class | SQUAMOUS | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 0.88302 | 0.11698 | SQUAMOUS |
| CL2001031607AA (testset) | other | 0.01535 | 0.98465 | other |
| CL2001031608AA (testset) | other | 0.02046 | 0.97954 | other |
| CL2001031609AA (testset) | other | 0.00671 | 0.99329 | other |
| CL2001031611AA (testset) | other | 0.03616 | 0.96384 | other |
| CL2001031612AA (testset) | other | 0.10247 | 0.89753 | other |
| CL2001031613AA (testset) | other | 0.01371 | 0.98629 | other |
| CL2001031615AA (testset) | other | 0.00623 | 0.99377 | other |
| CL2001031616AA (testset) | other | 0.12326 | 0.87674 | other |
| CL2001031618AA (testset) | other | 0.00539 | 0.99461 | other |
| CL2001031620AA (testset) | SQUAMOUS | 0.12265 | 0.87735 | other |
| CL2001031621AA (testset) | SQUAMOUS | 0.96098 | 0.03902 | SQUAMOUS |
| CL2001031622AA (testset) | other | 0.17399 | 0.82601 | other |
| CL2001031625AA (testset) | other | 0.0027 | 0.9973 | other |
| CL2001031627AA (testset) | other | 0.01056 | 0.98944 | other |
| CL2001031628AA (testset) | other | 0.00268 | 0.99732 | other |
| CL2001031629AA (testset) | other | 0.09989 | 0.90011 | other |
| CL2001031630AA (testset) | other | 0.00047 | 0.99953 | other |
| CL2001031631AA (testset) | other | 0.00571 | 0.99429 | other |
| CL2001031632AA (testset) | other | 0.02917 | 0.97083 | other |
| CL2001031634AA (testset) | other | 0.01373 | 0.98627 | other |
| CL2001031635AA (testset) | other | 0.00484 | 0.99516 | other |
| CL2001031636AA (testset) | other | 0.07102 | 0.92898 | other |
| CL2001032002AA (testset) | other | 0.00367 | 0.99633 | other |
| CL2001032005AA (testset) | other | 0.01792 | 0.98208 | other |
| CL2001032008AA (testset) | other | 0.13221 | 0.86779 | other |
| CL2001032009AA (testset) | other | 0.03224 | 0.96776 | other |
| CL2001032010AA (testset) | other | 0.00305 | 0.99695 | other |
| CL2001032011AA (testset) | other | 0.05392 | 0.94608 | other |
| CL2001032012AA (testset) | other | 0.01695 | 0.98305 | other |
| CL2001032013AA (testset) | other | 0.0081 | 0.9919 | other |
| CL2001032015AA (testset) | other | 0.02025 | 0.97975 | other |
| CL2001032016AA (testset) | other | 0.00153 | 0.99847 | other |
| CL2001032019AA (testset) | other | 0.02956 | 0.97044 | other |
| CL2001032020AA (testset) | other | 0.00535 | 0.99465 | other |
| CL2001032025AA (testset) | other | 0.00645 | 0.99355 | other |
| CL2001032026AA (testset) | other | 0.01249 | 0.98751 | other |
| CL2001032027AA (testset) | other | 0.01664 | 0.98336 | other |
| CL2001032030AA (testset) | other | 0.02141 | 0.97859 | other |
| CL2001032031AA (testset) | other | 0.03209 | 0.96791 | other |
| CL2001032032AA (testset) | other | 0.01383 | 0.98617 | other |
| CL2001032034AA (testset) | other | 0.09337 | 0.90663 | other |
| CL2001032036AA (testset) | other | 0.05103 | 0.94897 | other |
| CL2001032041AA (testset) | other | 0.02258 | 0.97742 | other |
| CL2001032043AA (testset) | other | 0.00868 | 0.99132 | other |
| CL2001032044AA (testset) | other | 0.0032 | 0.9968 | other |
| CL2001032045AA (testset) | other | 0.01802 | 0.98198 | other |
| CL2001032046AA (testset) | other | 0.0195 | 0.9805 | other |
| CL2001032101AA (testset) | other | 0.00331 | 0.99669 | other |
| CL2001032102AA (testset) | other | 0.00667 | 0.99333 | other |
| CL2001032103AA (testset) | other | 0.01044 | 0.98956 | other |
| CL2001032104AA (testset) | other | 0.00235 | 0.99765 | other |
| CL2001032105AA (testset) | other | 0.02074 | 0.97926 | other |
| CL2001032107AA (testset) | other | 0.01162 | 0.98838 | other |
| CL2001032108AA (testset) | other | 0.00445 | 0.99555 | other |
| CL2001032109AA (testset) | other | 0.03095 | 0.96905 | other |
| CL2001032110AA (testset) | other | 0.02384 | 0.97616 | other |
| CL2001032111AA (testset) | other | 0.00556 | 0.99444 | other |
| CL2001032113AA (testset) | other | 0.00565 | 0.99435 | other |
| CL2001032114AA (testset) | other | 0.00835 | 0.99165 | other |
| CL2001032115AA (testset) | other | 0.00468 | 0.99532 | other |
| CL2001032116AA (testset) | other | 0.00261 | 0.99739 | other |
| CL2001032117AA (testset) | other | 0.04275 | 0.95725 | other |
| CL2001032121AA (testset) | other | 0.00803 | 0.99197 | other |
| CL2001032122AA (testset) | SQUAMOUS | 0.94591 | 0.05409 | SQUAMOUS |
| CL2001032124AA (testset) | other | 0.00599 | 0.99401 | other |
| CL2001032125AA (testset) | other | 0.00428 | 0.99572 | other |
| CL2001032127AA (testset) | other | 0.00392 | 0.99608 | other |
| CL2001032128AA (testset) | other | 0.04326 | 0.95674 | other |
| CL2001032129AA (testset) | SQUAMOUS | 0.93359 | 0.06641 | SQUAMOUS |
| CL2001032130AA (testset) | other | 0.02142 | 0.97858 | other |
| CL2001032132AA (testset) | other | 0.00227 | 0.99773 | other |
| CL2001032134AA (testset) | other | 0.08781 | 0.91219 | other |
| CL2001032135AA (testset) | other | 0.02137 | 0.97863 | other |
| CL2001032136AA (testset) | other | 0.05107 | 0.94893 | other |
| CL2001032138AA (testset) | other | 0.00959 | 0.99041 | other |
| CL2001032141AA (testset) | other | 0.04383 | 0.95617 | other |
| CL2001032142AA (testset) | other | 0.09178 | 0.90822 | other |
| CL2001032144AA (testset) | SQUAMOUS | 0.99125 | 0.00875 | SQUAMOUS |
| CL2001032145AA (testset) | other | 0.00605 | 0.99395 | other |
| CL2001032147AA (testset) | other | 0.01704 | 0.98296 | other |
| CL2001032149AA (testset) | other | 0.02798 | 0.97202 | other |
| CL2001032151AA (testset) | other | 0.02028 | 0.97972 | other |
| CL2001032152AA (testset) | other | 0.00181 | 0.99819 | other |
| CL2001032153AA (testset) | SQUAMOUS | 0.22967 | 0.77033 | other |
| CL2001032155AA (testset) | other | 0.38603 | 0.61397 | other |
| CL2001032156AA (testset) | other | 0.09048 | 0.90952 | other |
| CL2001032202AA (testset) | other | 0.01073 | 0.98927 | other |
| CL2001032206AA (testset) | other | 0.02601 | 0.97399 | other |
| CL2001032207AA (testset) | SQUAMOUS | 0.7447 | 0.2553 | SQUAMOUS |
| CL2001032209AA (testset) | SQUAMOUS | 0.78192 | 0.21808 | SQUAMOUS |
| CL2001032210AA (testset) | other | 0.04515 | 0.95485 | other |
| CL2001032211AA (testset) | other | 0.03239 | 0.96761 | other |
| CL2001032212AA (testset) | other | 0.01558 | 0.98442 | other |
| CL2001032213AA (testset) | other | 0.04247 | 0.95753 | other |
| CL2001032214AA (testset) | other | 0.04174 | 0.95826 | other |
| CL2001032217AA (testset) | other | 0.02385 | 0.97615 | other |
| CL2001032218AA (testset) | SQUAMOUS | 0.60316 | 0.39684 | SQUAMOUS |
| CL2001032219AA (testset) | other | 0.04969 | 0.95031 | other |
| CL2001032220AA (testset) | other | 0.00355 | 0.99645 | other |
| CL2001032222AA (testset) | SQUAMOUS | 0.93024 | 0.06976 | SQUAMOUS |
| CL2001032229AA (testset) | other | 0.03051 | 0.96949 | other |
| CL2001032231AA (testset) | SQUAMOUS | 0.6693 | 0.3307 | SQUAMOUS |
| CL2001032232AA (testset) | other | 0.0051 | 0.9949 | other |
| CL2001032233AA (testset) | other | 0.00844 | 0.99156 | other |
| CL2001032238AA (testset) | other | 0.00157 | 0.99843 | other |
| CL2001032239AA (testset) | SQUAMOUS | 0.36306 | 0.63694 | other |
| CL2001032240AA (testset) | SQUAMOUS | 0.80852 | 0.19148 | SQUAMOUS |
| CL2001032241AA (testset) | other | 0.00773 | 0.99227 | other |
| CL2001032242AA (testset) | other | 0.00279 | 0.99721 | other |
| CL2001032243AA (testset) | other | 0.00231 | 0.99769 | other |
| CL2001032248AA (testset) | other | 0.16184 | 0.83816 | other |
| CL2001032249AA (testset) | other | 0.00153 | 0.99847 | other |
| CL2001032252AA (testset) | other | 0.24263 | 0.75737 | other |
| CL2001032254AA (testset) | other | 0.00568 | 0.99432 | other |
| CL2001032255AA (testset) | other | 0.02599 | 0.97401 | other |
| CL2001032256AA (testset) | other | 0.02416 | 0.97584 | other |
| CL2001032259AA (testset) | other | 0.00519 | 0.99481 | other |
| CL2001032260AA (testset) | other | 0.01083 | 0.98917 | other |
| CL2001032301AA (testset) | other | 0.08695 | 0.91305 | other |
| CL2001032304AA (testset) | other | 0.04142 | 0.95858 | other |
| CL2001032305AA (testset) | SQUAMOUS | 0.6907 | 0.3093 | SQUAMOUS |
| CL2001032306AA (testset) | other | 0.09507 | 0.90493 | other |
| CL2001032307AA (testset) | other | 0.04227 | 0.95773 | other |
| CL2001032308AA (testset) | other | 0.15647 | 0.84353 | other |
| CL2001032309AA (testset) | other | 0.00397 | 0.99603 | other |
| CL2001032310AA (testset) | other | 0.00142 | 0.99858 | other |
| CL2001032311AA (testset) | other | 0.1115 | 0.8885 | other |
| CL2001032312AA (testset) | other | 0.0163 | 0.9837 | other |
| CL2001032313AA (testset) | other | 0.00124 | 0.99876 | other |
| CL2001032314AA (testset) | other | 0.03813 | 0.96187 | other |
| CL2001032316AA (testset) | other | 0.00603 | 0.99397 | other |
| CL2001032601AA (testset) | other | 0.04501 | 0.95499 | other |
| CL2001032602AA (testset) | other | 0.00278 | 0.99722 | other |
| CL2001032604AA (testset) | other | 0.00572 | 0.99428 | other |
| CL2001032607AA (testset) | other | 0.05015 | 0.94985 | other |
| CL2001032608AA (testset) | SQUAMOUS | 0.88543 | 0.11457 | SQUAMOUS |
| CL2001032610AA (testset) | other | 0.09783 | 0.90217 | other |
| CL2001032612AA (testset) | other | 0.01339 | 0.98661 | other |
| CL2001032613AA (testset) | other | 0.02643 | 0.97357 | other |
| CL2001032614AA (testset) | other | 0.00631 | 0.99369 | other |
| CL2001032616AA (testset) | other | 0.00947 | 0.99053 | other |
| CL2001032617AA (testset) | other | 0.02599 | 0.97401 | other |
| CL2001032620AA (testset) | other | 0.00692 | 0.99308 | other |
| CL2001032625AA (testset) | other | 0.00691 | 0.99309 | other |
| CL2001032627AA (testset) | SQUAMOUS | 0.97827 | 0.02173 | SQUAMOUS |
| CL2001032628AA (testset) | other | 0.00906 | 0.99094 | other |
| CL2001032629AA (testset) | other | 0.00745 | 0.99255 | other |
| CL2001032630AA (testset) | other | 0.00604 | 0.99396 | other |
| CL2001032632AA (testset) | other | 0.0259 | 0.9741 | other |
| CL2001032638AA (testset) | other | 0.01574 | 0.98426 | other |
| CL2001032640AA (testset) | other | 0.01387 | 0.98613 | other |
| CL2001032643AA (testset) | other | 0.12813 | 0.87187 | other |
| CL2001032644AA (testset) | SQUAMOUS | 0.80304 | 0.19696 | SQUAMOUS |
| CL2001032647AA (testset) | other | 0.02317 | 0.97683 | other |
| CL2001032701AA (testset) | other | 0.02038 | 0.97962 | other |
| CL2001032702AA (testset) | other | 0.02019 | 0.97981 | other |
| CL2001032703AA (testset) | other | 0.09 | 0.91 | other |
| CL2001032704AA (testset) | other | 0.02412 | 0.97588 | other |
| CL2001032706AA (testset) | other | 0.01239 | 0.98761 | other |
| CL2001032709AA (testset) | other | 0.0113 | 0.9887 | other |
| CL2001032716AA (testset) | other | 0.0533 | 0.9467 | other |
| CL2001032717AA (testset) | other | 0.00637 | 0.99363 | other |
| CL2001032718AA (testset) | other | 0.01042 | 0.98958 | other |
| CL2001032719AA (testset) | SQUAMOUS | 0.97807 | 0.02193 | SQUAMOUS |
| CL2001032720AA (testset) | other | 0.06399 | 0.93601 | other |
| CL2001032722AA (testset) | other | 0.00198 | 0.99802 | other |
| CL2001032724AA (testset) | other | 0.05232 | 0.94768 | other |
| CL2001032725AA (testset) | other | 0.01335 | 0.98665 | other |
| CL2001032727AA (testset) | other | 0.01469 | 0.98531 | other |
| CL2001032729AA (testset) | other | 0.0073 | 0.9927 | other |
| CL2001032730AA (testset) | other | 0.03478 | 0.96522 | other |
| CL2001032732AA (testset) | SQUAMOUS | 0.06122 | 0.93878 | other |
| CL2001032733AA (testset) | other | 0.01607 | 0.98393 | other |
| CL2001032738AA (testset) | other | 0.06226 | 0.93774 | other |
| CL2001032742AA (testset) | other | 0.16776 | 0.83224 | other |
| CL2001032746AA (testset) | other | 0.0107 | 0.9893 | other |
| CL2001032747AA (testset) | other | 0.05802 | 0.94198 | other |
| CL2001032833AA (testset) | other | 0.01175 | 0.98825 | other |
| CL2001032836AA (testset) | other | 0.30965 | 0.69035 | other |
| CL2001032838AA (testset) | other | 0.01323 | 0.98677 | other |
| CL2001032839AA (testset) | other | 0.03915 | 0.96085 | other |
| CL2001032841AA (testset) | other | 0.00156 | 0.99844 | other |
| CL2001032842AA (testset) | other | 0.01934 | 0.98066 | other |
| CL2001032843AA (testset) | other | 0.00406 | 0.99594 | other |
| CL2001032845AA (testset) | other | 0.00556 | 0.99444 | other |
| CL2001032846AA (testset) | other | 0.00969 | 0.99031 | other |
| CL2001032847AA (testset) | other | 0.00823 | 0.99177 | other |
| CL2001032848AA (testset) | other | 0.09965 | 0.90035 | other |
| CL2001032850AA (testset) | other | 0.00119 | 0.99881 | other |
| CL2001032853AA (testset) | SQUAMOUS | 0.87949 | 0.12051 | SQUAMOUS |
| CL2001032854AA (testset) | other | 0.01388 | 0.98612 | other |
| CL2001032856AA (testset) | other | 0.01026 | 0.98974 | other |
| CL2001032857AA (testset) | other | 0.01237 | 0.98763 | other |
| CL2001032860AA (testset) | other | 0.0376 | 0.9624 | other |
| CL2001040305AA (testset) | other | 0.01345 | 0.98655 | other |
| CL2001040306AA (testset) | other | 0.02088 | 0.97912 | other |
| CL2001041708AA (testset) | other | 0.01222 | 0.98778 | other |
| CL2001041711AA (testset) | other | 0.04844 | 0.95156 | other |
| CL2001041716AA (testset) | other | 0.02031 | 0.97969 | other |
| CL2001042501AA (testset) | other | 0.01509 | 0.98491 | other |
| CL2001042505AA (testset) | other | 0.02191 | 0.97809 | other |
| CL2001042506AA (testset) | other | 0.06518 | 0.93482 | other |