GO:0006468 | protein amino acid phosphorylation | Biological Process |
| GO:0006468 | protein amino acid phosphorylation |
|---|
The following 41 of these are used in classification:
| Symbol | Genename | SQUAMOUS score | other score | |
|---|---|---|---|---|
| 36042_at | NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | 0.9115 | -0.1052 |
| 33182_at | NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | 0.5649 | -0.0652 |
| 40030_at | PRKY | protein kinase, Y-linked | 0.513 | -0.0592 |
| 36926_at | MAPK6 | mitogen-activated protein kinase 6 | 0.4559 | -0.0526 |
| 38617_at | LIMK2 | LIM domain kinase 2 | 0.3572 | -0.0412 |
| 38280_s_at | NTRK2 | neurotrophic tyrosine kinase, receptor, type 2 | 0.3351 | -0.0387 |
| 35699_at | BUB1B | BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast) | 0.3324 | -0.0384 |
| 1007_s_at | DDR1 | discoidin domain receptor family, member 1 | 0.3199 | -0.0369 |
| 33266_at | AURKB | aurora kinase B | 0.3113 | -0.0359 |
| 35301_at | CRKL | v-crk sarcoma virus CT10 oncogene homolog (avian)-like | 0.216 | -0.0249 |
| 36643_at | DDR1 | discoidin domain receptor family, member 1 | 0.1961 | -0.0226 |
| 1558_g_at | PAK1 | p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast) | 0.1854 | -0.0214 |
| 31805_at | FGFR3 | fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) | 0.1756 | -0.0203 |
| 40258_at | CSNK2A1 | casein kinase 2, alpha 1 polypeptide | 0.1624 | -0.0187 |
| 1560_g_at | PAK2 | p21 (CDKN1A)-activated kinase 2 | 0.1487 | -0.0172 |
| 594_s_at | CSNK2A1 | casein kinase 2, alpha 1 polypeptide | 0.1471 | -0.017 |
| 160026_at | PRKX | protein kinase, X-linked | 0.1359 | -0.0157 |
| 1674_at | YES1 | v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 | 0.1348 | -0.0156 |
| 41579_s_at | PRKCI | protein kinase C, iota | 0.1314 | -0.0152 |
| 1602_at | PRKCI | protein kinase C, iota | 0.1244 | -0.0144 |
| 1970_s_at | FGFR2 | fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) | 0.1207 | -0.0139 |
| 34718_at | IGF1R | insulin-like growth factor 1 receptor | 0.1001 | -0.0116 |
| 39980_at | VRK1 | vaccinia related kinase 1 | 0.0973 | -0.0112 |
| 1942_s_at | CDK4 | cyclin-dependent kinase 4 | 0.0972 | -0.0112 |
| 1363_at | FGFR2 | fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) | 0.0937 | -0.0108 |
| 35651_at | MAP3K4 | mitogen-activated protein kinase kinase kinase 4 | 0.0853 | -0.0098 |
| 34329_at | PAK2 | p21 (CDKN1A)-activated kinase 2 | 0.0832 | -0.0096 |
| 1438_at | EPHB3 | EphB3 | 0.0811 | -0.0094 |
| 1557_at | PAK1 | p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast) | 0.0708 | -0.0082 |
| 717_at | TRB2 | tribbles homolog 2 | 0.052 | -0.006 |
| 2086_s_at | TYRO3 | TYRO3 protein tyrosine kinase | 0.045 | -0.0052 |
| 1603_g_at | PRKCI | protein kinase C, iota | 0.0442 | -0.0051 |
| 41535_at | CDK2AP1 | CDK2-associated protein 1 | 0.0393 | -0.0045 |
| 446_at | CSNK1G2 | casein kinase 1, gamma 2 | 0.0379 | -0.0044 |
| 31854_at | CASK | calcium/calmodulin-dependent serine protein kinase (MAGUK family) | 0.0342 | -0.0039 |
| 40113_at | TRB2 | tribbles homolog 2 | 0.0296 | -0.0034 |
| 539_at | RYK | RYK receptor-like tyrosine kinase | 0.0159 | -0.0018 |
| 1143_s_at | FGFR2 | fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) | 0.0154 | -0.0018 |
| 36909_at | WEE1 | WEE1 homolog (S. pombe) | 0.0153 | -0.0018 |
| 40473_at | STK24 | serine/threonine kinase 24 (STE20 homolog, yeast) | 0.015 | -0.0017 |
| 35652_g_at | MAP3K4 | mitogen-activated protein kinase kinase kinase 4 | 0.0079 | -9e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.85714 | 0.98352 |
| other | 0.98352 | 0.85714 |
| Sensitivity | Specificity | |
|---|---|---|
| SQUAMOUS | 0.85714 | 0.98352 |
| other | 0.98352 | 0.85714 |
| Class | SQUAMOUS | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | SQUAMOUS | 0.98315 | 0.01685 | SQUAMOUS |
| CL2001031607AA (testset) | other | 0.07824 | 0.92176 | other |
| CL2001031608AA (testset) | other | 0.00259 | 0.99741 | other |
| CL2001031609AA (testset) | other | 0.00139 | 0.99861 | other |
| CL2001031611AA (testset) | other | 0.09582 | 0.90418 | other |
| CL2001031612AA (testset) | other | 0.34375 | 0.65625 | other |
| CL2001031613AA (testset) | other | 0.12428 | 0.87572 | other |
| CL2001031615AA (testset) | other | 0.01496 | 0.98504 | other |
| CL2001031616AA (testset) | other | 0.06382 | 0.93618 | other |
| CL2001031618AA (testset) | other | 0.00081 | 0.99919 | other |
| CL2001031620AA (testset) | SQUAMOUS | 0.99729 | 0.00271 | SQUAMOUS |
| CL2001031621AA (testset) | SQUAMOUS | 0.99994 | 6e-05 | SQUAMOUS |
| CL2001031622AA (testset) | other | 0.76875 | 0.23125 | SQUAMOUS |
| CL2001031625AA (testset) | other | 0.00273 | 0.99727 | other |
| CL2001031627AA (testset) | other | 0.00652 | 0.99348 | other |
| CL2001031628AA (testset) | other | 0.00213 | 0.99787 | other |
| CL2001031629AA (testset) | other | 0.04292 | 0.95708 | other |
| CL2001031630AA (testset) | other | 0.00576 | 0.99424 | other |
| CL2001031631AA (testset) | other | 0.00243 | 0.99757 | other |
| CL2001031632AA (testset) | other | 0.01623 | 0.98377 | other |
| CL2001031634AA (testset) | other | 0.00283 | 0.99717 | other |
| CL2001031635AA (testset) | other | 0.00069 | 0.99931 | other |
| CL2001031636AA (testset) | other | 0.01614 | 0.98386 | other |
| CL2001032002AA (testset) | other | 0.00147 | 0.99853 | other |
| CL2001032005AA (testset) | other | 0.00556 | 0.99444 | other |
| CL2001032008AA (testset) | other | 0.28612 | 0.71388 | other |
| CL2001032009AA (testset) | other | 0.00229 | 0.99771 | other |
| CL2001032010AA (testset) | other | 0.0026 | 0.9974 | other |
| CL2001032011AA (testset) | other | 0.00863 | 0.99137 | other |
| CL2001032012AA (testset) | other | 0.00172 | 0.99828 | other |
| CL2001032013AA (testset) | other | 0.00446 | 0.99554 | other |
| CL2001032015AA (testset) | other | 0.00484 | 0.99516 | other |
| CL2001032016AA (testset) | other | 0.00117 | 0.99883 | other |
| CL2001032019AA (testset) | other | 0.01605 | 0.98395 | other |
| CL2001032020AA (testset) | other | 0.00614 | 0.99386 | other |
| CL2001032025AA (testset) | other | 0.00772 | 0.99228 | other |
| CL2001032026AA (testset) | other | 0.00586 | 0.99414 | other |
| CL2001032027AA (testset) | other | 0.16963 | 0.83037 | other |
| CL2001032030AA (testset) | other | 0.02465 | 0.97535 | other |
| CL2001032031AA (testset) | other | 0.01177 | 0.98823 | other |
| CL2001032032AA (testset) | other | 0.00905 | 0.99095 | other |
| CL2001032034AA (testset) | other | 0.0636 | 0.9364 | other |
| CL2001032036AA (testset) | other | 0.21144 | 0.78856 | other |
| CL2001032041AA (testset) | other | 0.03943 | 0.96057 | other |
| CL2001032043AA (testset) | other | 0.07134 | 0.92866 | other |
| CL2001032044AA (testset) | other | 0.00393 | 0.99607 | other |
| CL2001032045AA (testset) | other | 0.0838 | 0.9162 | other |
| CL2001032046AA (testset) | other | 0.01012 | 0.98988 | other |
| CL2001032101AA (testset) | other | 0.00333 | 0.99667 | other |
| CL2001032102AA (testset) | other | 0.06019 | 0.93981 | other |
| CL2001032103AA (testset) | other | 0.00092 | 0.99908 | other |
| CL2001032104AA (testset) | other | 0.11883 | 0.88117 | other |
| CL2001032105AA (testset) | other | 0.00408 | 0.99592 | other |
| CL2001032107AA (testset) | other | 0.01092 | 0.98908 | other |
| CL2001032108AA (testset) | other | 0.00163 | 0.99837 | other |
| CL2001032109AA (testset) | other | 0.0181 | 0.9819 | other |
| CL2001032110AA (testset) | other | 0.00295 | 0.99705 | other |
| CL2001032111AA (testset) | other | 0.02942 | 0.97058 | other |
| CL2001032113AA (testset) | other | 0.00175 | 0.99825 | other |
| CL2001032114AA (testset) | other | 0.00153 | 0.99847 | other |
| CL2001032115AA (testset) | other | 0.0011 | 0.9989 | other |
| CL2001032116AA (testset) | other | 0.0052 | 0.9948 | other |
| CL2001032117AA (testset) | other | 0.09377 | 0.90623 | other |
| CL2001032121AA (testset) | other | 0.04048 | 0.95952 | other |
| CL2001032122AA (testset) | SQUAMOUS | 0.88154 | 0.11846 | SQUAMOUS |
| CL2001032124AA (testset) | other | 0.01048 | 0.98952 | other |
| CL2001032125AA (testset) | other | 0.97402 | 0.02598 | SQUAMOUS |
| CL2001032127AA (testset) | other | 0.00054 | 0.99946 | other |
| CL2001032128AA (testset) | other | 0.02296 | 0.97704 | other |
| CL2001032129AA (testset) | SQUAMOUS | 0.99999 | 1e-05 | SQUAMOUS |
| CL2001032130AA (testset) | other | 0.09838 | 0.90162 | other |
| CL2001032132AA (testset) | other | 0.0193 | 0.9807 | other |
| CL2001032134AA (testset) | other | 0.12573 | 0.87427 | other |
| CL2001032135AA (testset) | other | 0.22336 | 0.77664 | other |
| CL2001032136AA (testset) | other | 0.09073 | 0.90927 | other |
| CL2001032138AA (testset) | other | 0.02606 | 0.97394 | other |
| CL2001032141AA (testset) | other | 0.03305 | 0.96695 | other |
| CL2001032142AA (testset) | other | 0.6521 | 0.3479 | SQUAMOUS |
| CL2001032144AA (testset) | SQUAMOUS | 0.68072 | 0.31928 | SQUAMOUS |
| CL2001032145AA (testset) | other | 0.00054 | 0.99946 | other |
| CL2001032147AA (testset) | other | 0.07694 | 0.92306 | other |
| CL2001032149AA (testset) | other | 0.12231 | 0.87769 | other |
| CL2001032151AA (testset) | other | 0.00406 | 0.99594 | other |
| CL2001032152AA (testset) | other | 0.00258 | 0.99742 | other |
| CL2001032153AA (testset) | SQUAMOUS | 0.99787 | 0.00213 | SQUAMOUS |
| CL2001032155AA (testset) | other | 0.42411 | 0.57589 | other |
| CL2001032156AA (testset) | other | 0.11498 | 0.88502 | other |
| CL2001032202AA (testset) | other | 0.0231 | 0.9769 | other |
| CL2001032206AA (testset) | other | 0.00767 | 0.99233 | other |
| CL2001032207AA (testset) | SQUAMOUS | 0.99943 | 0.00057 | SQUAMOUS |
| CL2001032209AA (testset) | SQUAMOUS | 1 | 0 | SQUAMOUS |
| CL2001032210AA (testset) | other | 0.00138 | 0.99862 | other |
| CL2001032211AA (testset) | other | 0.01947 | 0.98053 | other |
| CL2001032212AA (testset) | other | 0.00201 | 0.99799 | other |
| CL2001032213AA (testset) | other | 0.01243 | 0.98757 | other |
| CL2001032214AA (testset) | other | 0.08737 | 0.91263 | other |
| CL2001032217AA (testset) | other | 0.04098 | 0.95902 | other |
| CL2001032218AA (testset) | SQUAMOUS | 0.92896 | 0.07104 | SQUAMOUS |
| CL2001032219AA (testset) | other | 0.00095 | 0.99905 | other |
| CL2001032220AA (testset) | other | 0.00339 | 0.99661 | other |
| CL2001032222AA (testset) | SQUAMOUS | 0.72131 | 0.27869 | SQUAMOUS |
| CL2001032229AA (testset) | other | 0.00143 | 0.99857 | other |
| CL2001032231AA (testset) | SQUAMOUS | 0.18147 | 0.81853 | other |
| CL2001032232AA (testset) | other | 0.01103 | 0.98897 | other |
| CL2001032233AA (testset) | other | 0.00378 | 0.99622 | other |
| CL2001032238AA (testset) | other | 0.00086 | 0.99914 | other |
| CL2001032239AA (testset) | SQUAMOUS | 0.95944 | 0.04056 | SQUAMOUS |
| CL2001032240AA (testset) | SQUAMOUS | 0.99198 | 0.00802 | SQUAMOUS |
| CL2001032241AA (testset) | other | 0.00357 | 0.99643 | other |
| CL2001032242AA (testset) | other | 0.01896 | 0.98104 | other |
| CL2001032243AA (testset) | other | 0.00456 | 0.99544 | other |
| CL2001032248AA (testset) | other | 0.05252 | 0.94748 | other |
| CL2001032249AA (testset) | other | 0.02509 | 0.97491 | other |
| CL2001032252AA (testset) | other | 0.09504 | 0.90496 | other |
| CL2001032254AA (testset) | other | 0.00215 | 0.99785 | other |
| CL2001032255AA (testset) | other | 0.01015 | 0.98985 | other |
| CL2001032256AA (testset) | other | 0.00932 | 0.99068 | other |
| CL2001032259AA (testset) | other | 0.13185 | 0.86815 | other |
| CL2001032260AA (testset) | other | 0.04655 | 0.95345 | other |
| CL2001032301AA (testset) | other | 0.04537 | 0.95463 | other |
| CL2001032304AA (testset) | other | 0.00722 | 0.99278 | other |
| CL2001032305AA (testset) | SQUAMOUS | 0.33756 | 0.66244 | other |
| CL2001032306AA (testset) | other | 0.02546 | 0.97454 | other |
| CL2001032307AA (testset) | other | 0.00548 | 0.99452 | other |
| CL2001032308AA (testset) | other | 0.03922 | 0.96078 | other |
| CL2001032309AA (testset) | other | 0.00419 | 0.99581 | other |
| CL2001032310AA (testset) | other | 0.0046 | 0.9954 | other |
| CL2001032311AA (testset) | other | 0.11409 | 0.88591 | other |
| CL2001032312AA (testset) | other | 0.00397 | 0.99603 | other |
| CL2001032313AA (testset) | other | 0.00477 | 0.99523 | other |
| CL2001032314AA (testset) | other | 0.00174 | 0.99826 | other |
| CL2001032316AA (testset) | other | 0.01532 | 0.98468 | other |
| CL2001032601AA (testset) | other | 0.02036 | 0.97964 | other |
| CL2001032602AA (testset) | other | 0.01277 | 0.98723 | other |
| CL2001032604AA (testset) | other | 0.00363 | 0.99637 | other |
| CL2001032607AA (testset) | other | 7e-04 | 0.9993 | other |
| CL2001032608AA (testset) | SQUAMOUS | 0.99993 | 7e-05 | SQUAMOUS |
| CL2001032610AA (testset) | other | 0.01649 | 0.98351 | other |
| CL2001032612AA (testset) | other | 0.00529 | 0.99471 | other |
| CL2001032613AA (testset) | other | 0.00171 | 0.99829 | other |
| CL2001032614AA (testset) | other | 0.00412 | 0.99588 | other |
| CL2001032616AA (testset) | other | 0.00791 | 0.99209 | other |
| CL2001032617AA (testset) | other | 0.03402 | 0.96598 | other |
| CL2001032620AA (testset) | other | 0.00232 | 0.99768 | other |
| CL2001032625AA (testset) | other | 0.03639 | 0.96361 | other |
| CL2001032627AA (testset) | SQUAMOUS | 0.99995 | 5e-05 | SQUAMOUS |
| CL2001032628AA (testset) | other | 0.00359 | 0.99641 | other |
| CL2001032629AA (testset) | other | 0.00052 | 0.99948 | other |
| CL2001032630AA (testset) | other | 0.0013 | 0.9987 | other |
| CL2001032632AA (testset) | other | 0.00354 | 0.99646 | other |
| CL2001032638AA (testset) | other | 0.01977 | 0.98023 | other |
| CL2001032640AA (testset) | other | 0.00135 | 0.99865 | other |
| CL2001032643AA (testset) | other | 0.05761 | 0.94239 | other |
| CL2001032644AA (testset) | SQUAMOUS | 0.99928 | 0.00072 | SQUAMOUS |
| CL2001032647AA (testset) | other | 0.00607 | 0.99393 | other |
| CL2001032701AA (testset) | other | 0.00322 | 0.99678 | other |
| CL2001032702AA (testset) | other | 0.08983 | 0.91017 | other |
| CL2001032703AA (testset) | other | 0.08395 | 0.91605 | other |
| CL2001032704AA (testset) | other | 0.01825 | 0.98175 | other |
| CL2001032706AA (testset) | other | 0.03491 | 0.96509 | other |
| CL2001032709AA (testset) | other | 0.00311 | 0.99689 | other |
| CL2001032716AA (testset) | other | 0.07815 | 0.92185 | other |
| CL2001032717AA (testset) | other | 0.00305 | 0.99695 | other |
| CL2001032718AA (testset) | other | 0.15772 | 0.84228 | other |
| CL2001032719AA (testset) | SQUAMOUS | 0.9229 | 0.0771 | SQUAMOUS |
| CL2001032720AA (testset) | other | 0.00568 | 0.99432 | other |
| CL2001032722AA (testset) | other | 0.02193 | 0.97807 | other |
| CL2001032724AA (testset) | other | 0.00264 | 0.99736 | other |
| CL2001032725AA (testset) | other | 0.00412 | 0.99588 | other |
| CL2001032727AA (testset) | other | 0.00554 | 0.99446 | other |
| CL2001032729AA (testset) | other | 0.00878 | 0.99122 | other |
| CL2001032730AA (testset) | other | 0.00995 | 0.99005 | other |
| CL2001032732AA (testset) | SQUAMOUS | 0.17102 | 0.82898 | other |
| CL2001032733AA (testset) | other | 0.00324 | 0.99676 | other |
| CL2001032738AA (testset) | other | 0.02355 | 0.97645 | other |
| CL2001032742AA (testset) | other | 0.25667 | 0.74333 | other |
| CL2001032746AA (testset) | other | 0.01298 | 0.98702 | other |
| CL2001032747AA (testset) | other | 0.01832 | 0.98168 | other |
| CL2001032833AA (testset) | other | 0.00696 | 0.99304 | other |
| CL2001032836AA (testset) | other | 0.07597 | 0.92403 | other |
| CL2001032838AA (testset) | other | 0.04013 | 0.95987 | other |
| CL2001032839AA (testset) | other | 0.01678 | 0.98322 | other |
| CL2001032841AA (testset) | other | 0.00147 | 0.99853 | other |
| CL2001032842AA (testset) | other | 0.04226 | 0.95774 | other |
| CL2001032843AA (testset) | other | 0.0154 | 0.9846 | other |
| CL2001032845AA (testset) | other | 0.00257 | 0.99743 | other |
| CL2001032846AA (testset) | other | 0.00922 | 0.99078 | other |
| CL2001032847AA (testset) | other | 0.0041 | 0.9959 | other |
| CL2001032848AA (testset) | other | 0.42463 | 0.57537 | other |
| CL2001032850AA (testset) | other | 0.00333 | 0.99667 | other |
| CL2001032853AA (testset) | SQUAMOUS | 0.99824 | 0.00176 | SQUAMOUS |
| CL2001032854AA (testset) | other | 0.00167 | 0.99833 | other |
| CL2001032856AA (testset) | other | 0.00497 | 0.99503 | other |
| CL2001032857AA (testset) | other | 0.00428 | 0.99572 | other |
| CL2001032860AA (testset) | other | 0.00347 | 0.99653 | other |
| CL2001040305AA (testset) | other | 0.00708 | 0.99292 | other |
| CL2001040306AA (testset) | other | 0.00176 | 0.99824 | other |
| CL2001041708AA (testset) | other | 0.04142 | 0.95858 | other |
| CL2001041711AA (testset) | other | 0.00102 | 0.99898 | other |
| CL2001041716AA (testset) | other | 0.02541 | 0.97459 | other |
| CL2001042501AA (testset) | other | 0.00023 | 0.99977 | other |
| CL2001042505AA (testset) | other | 0.01258 | 0.98742 | other |
| CL2001042506AA (testset) | other | 0.01442 | 0.98558 | other |