GO:0008015

GO:0008015

circulation (annotated genes)

Biological Process

Parent node

GO:0008015	circulation

This leaf node contains 58 genes

The following 57 of these are used in classification:

	Symbol	Genename	SQUAMOUS score	other score
34777_at	ADM	adrenomedullin	0.9596	-0.111
33563_s_at	COL4A3	collagen, type IV, alpha 3 (Goodpasture antigen)	-0.705	0.0816
38732_at	CLNS1A	chloride channel, nucleotide-sensitive, 1A	0.589	-0.0681
32068_at	C3AR1	complement component 3a receptor 1	-0.5644	0.0653
38831_f_at	EPO	erythropoietin	0.4332	-0.0501
41209_at	LPL	lipoprotein lipase	-0.3983	0.0461
32488_at	COL3A1	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	0.3916	-0.0453
37233_at	OLR1	oxidised low density lipoprotein (lectin-like) receptor 1	-0.3884	0.0449
31496_g_at	XCL2	chemokine (C motif) ligand 2	0.3828	-0.0443
32562_at	ENG	endoglin (Osler-Rendu-Weber syndrome 1)	-0.3556	0.0411
34597_at	PPYR1	pancreatic polypeptide receptor 1	-0.3455	0.04
34635_at	HTR7	5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)	-0.339	0.0392
33561_at	COL4A3	collagen, type IV, alpha 3 (Goodpasture antigen)	-0.3116	0.036
32894_at	EPO	erythropoietin	-0.2963	0.0343
33562_g_at	COL4A3	collagen, type IV, alpha 3 (Goodpasture antigen)	-0.2773	0.0321
32115_r_at	ADORA2A	adenosine A2a receptor	0.2754	-0.0319
36657_at	APOC2	apolipoprotein C-II	-0.2472	0.0286
38604_at	NPY	neuropeptide Y	-0.2232	0.0258
40398_s_at	MEOX2	mesenchyme homeo box 2 (growth arrest-specific homeo box)	-0.1876	0.0217
37983_at	AGTR1	angiotensin II receptor, type 1	-0.1803	0.0209
31495_at	XCL2	chemokine (C motif) ligand 2	-0.1749	0.0202
32114_s_at	ADORA2A	adenosine A2a receptor	-0.1717	0.0199
34523_at	APOA4	apolipoprotein A-IV	-0.1688	0.0195
32343_at	EPB41	erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	-0.1673	0.0194
40311_at	EPO	erythropoietin	-0.1539	0.0178
36668_at	DIA1	diaphorase (NADH) (cytochrome b-5 reductase)	0.1519	-0.0176
608_at	APOE	apolipoprotein E	-0.1505	0.0174
36245_at	HTR2B	5-hydroxytryptamine (serotonin) receptor 2B	-0.1497	0.0173
34634_s_at	HTR7	5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)	0.1377	-0.0159
39309_at	BDKRB2	bradykinin receptor B2	-0.1356	0.0157
38734_at	PLN	phospholamban	-0.1312	0.0152
39610_at	HOXB2	homeo box B2	0.1258	-0.0146
34678_at	FER1L3	fer-1-like 3, myoferlin (C. elegans)	0.1115	-0.0129
1023_at	EPO	erythropoietin	-0.1052	0.0122
35332_at	APOB	apolipoprotein B (including Ag(x) antigen)	-0.0857	0.0099
37243_at	GUCY1B3	guanylate cyclase 1, soluble, beta 3	0.0835	-0.0097
32920_at	HCN4	hyperpolarization activated cyclic nucleotide-gated potassium channel 4	-0.0834	0.0097
31515_at	EPO	erythropoietin	-0.0831	0.0096
34581_s_at	EPB41	erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	-0.0829	0.0096
346_s_at	AGTR1	angiotensin II receptor, type 1	-0.0778	0.009
31721_at	LPA	lipoprotein, Lp(a)	-0.0747	0.0086
32666_at	CXCL12	chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)	-0.0726	0.0084
37796_at	EPO	erythropoietin	0.0713	-0.0082
40397_at	MEOX2	mesenchyme homeo box 2 (growth arrest-specific homeo box)	-0.0575	0.0067
40565_at	APOE	apolipoprotein E	-0.0562	0.0065
37179_at	NFE2	nuclear factor (erythroid-derived 2), 45kDa	-0.0557	0.0064
39106_at	APOA1	apolipoprotein A-I	0.0399	-0.0046
705_at	MTHFR	5,10-methylenetetrahydrofolate reductase (NADPH)	-0.0383	0.0044
33834_at	CXCL12	chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)	0.0345	-0.004
39310_at	BDKRB2	bradykinin receptor B2	-0.0304	0.0035
38832_r_at	EPO	erythropoietin	0.0281	-0.0033
40399_r_at	MEOX2	mesenchyme homeo box 2 (growth arrest-specific homeo box)	0.027	-0.0031
32897_at	MTHFR	5,10-methylenetetrahydrofolate reductase (NADPH)	0.0171	-0.002
39775_at	SERPING1	serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)	-0.0157	0.0018
36918_at	GUCY1A3	guanylate cyclase 1, soluble, alpha 3	-0.0147	0.0017
38955_at	AVPR1A	arginine vasopressin receptor 1A	0.0132	-0.0015
431_at	CXCL10	chemokine (C-X-C motif) ligand 10	0.0094	-0.0011

Performance on training data

• Error rate: 0.02963
• Performance: 0.23166
• Redundancy: 3.61594

	Sensitivity	Specificity
SQUAMOUS	0.85714	0.98347
other	0.98347	0.85714

Performance on test data

• Error rate: 0.08824
• Performance: 0.31863
• Redundancy: 3.78248

	Sensitivity	Specificity
SQUAMOUS	0.57143	0.95082
other	0.95082	0.57143

Predictions

	Class	SQUAMOUS	other	Predictionn
CL2001031606AA (testset)	SQUAMOUS	0.74517	0.25483	SQUAMOUS
CL2001031607AA	other	0.00599	0.99401	other
CL2001031608AA	other	9e-04	0.9991	other
CL2001031609AA (testset)	other	0.0056	0.9944	other
CL2001031611AA	other	0.05698	0.94302	other
CL2001031612AA (testset)	other	0.03496	0.96504	other
CL2001031613AA (testset)	other	0.0165	0.9835	other
CL2001031615AA (testset)	other	0.01132	0.98868	other
CL2001031616AA	other	0.11131	0.88869	other
CL2001031618AA	other	0.00041	0.99959	other
CL2001031620AA	SQUAMOUS	0.50444	0.49556	SQUAMOUS
CL2001031621AA	SQUAMOUS	0.86653	0.13347	SQUAMOUS
CL2001031622AA	other	0.0845	0.9155	other
CL2001031625AA	other	0.00403	0.99597	other
CL2001031627AA (testset)	other	0.0042	0.9958	other
CL2001031628AA	other	0.00382	0.99618	other
CL2001031629AA	other	0.81972	0.18028	SQUAMOUS
CL2001031630AA	other	0.00028	0.99972	other
CL2001031631AA (testset)	other	0.55256	0.44744	SQUAMOUS
CL2001031632AA	other	0.10398	0.89602	other
CL2001031634AA	other	0.00033	0.99967	other
CL2001031635AA (testset)	other	9e-04	0.9991	other
CL2001031636AA (testset)	other	0.85753	0.14247	SQUAMOUS
CL2001032002AA	other	4e-04	0.9996	other
CL2001032005AA	other	0.04566	0.95434	other
CL2001032008AA	other	0.32242	0.67758	other
CL2001032009AA	other	0.00715	0.99285	other
CL2001032010AA	other	9e-05	0.99991	other
CL2001032011AA	other	7e-04	0.9993	other
CL2001032012AA	other	0.00012	0.99988	other
CL2001032013AA	other	0.0014	0.9986	other
CL2001032015AA (testset)	other	0.03472	0.96528	other
CL2001032016AA (testset)	other	0.0044	0.9956	other
CL2001032019AA	other	0.00286	0.99714	other
CL2001032020AA (testset)	other	0.01186	0.98814	other
CL2001032025AA (testset)	other	0.00077	0.99923	other
CL2001032026AA	other	0.00178	0.99822	other
CL2001032027AA (testset)	other	0.05839	0.94161	other
CL2001032030AA (testset)	other	0.20696	0.79304	other
CL2001032031AA (testset)	other	0.07522	0.92478	other
CL2001032032AA	other	0.00032	0.99968	other
CL2001032034AA (testset)	other	0.01354	0.98646	other
CL2001032036AA	other	0.07111	0.92889	other
CL2001032041AA (testset)	other	0.006	0.994	other
CL2001032043AA	other	0.0015	0.9985	other
CL2001032044AA	other	0.00077	0.99923	other
CL2001032045AA (testset)	other	9e-05	0.99991	other
CL2001032046AA	other	0.00099	0.99901	other
CL2001032101AA	other	0.00456	0.99544	other
CL2001032102AA	other	0.00022	0.99978	other
CL2001032103AA	other	3e-04	0.9997	other
CL2001032104AA	other	0.00117	0.99883	other
CL2001032105AA	other	0.01486	0.98514	other
CL2001032107AA	other	0.0179	0.9821	other
CL2001032108AA (testset)	other	0.00501	0.99499	other
CL2001032109AA (testset)	other	7e-04	0.9993	other
CL2001032110AA	other	0.00094	0.99906	other
CL2001032111AA (testset)	other	0.00126	0.99874	other
CL2001032113AA	other	0.00705	0.99295	other
CL2001032114AA	other	0.0016	0.9984	other
CL2001032115AA	other	4e-05	0.99996	other
CL2001032116AA	other	0.00476	0.99524	other
CL2001032117AA (testset)	other	0.05167	0.94833	other
CL2001032121AA	other	0.08349	0.91651	other
CL2001032122AA	SQUAMOUS	0.71818	0.28182	SQUAMOUS
CL2001032124AA (testset)	other	0.00138	0.99862	other
CL2001032125AA	other	0.03372	0.96628	other
CL2001032127AA (testset)	other	0.00277	0.99723	other
CL2001032128AA (testset)	other	0.00562	0.99438	other
CL2001032129AA (testset)	SQUAMOUS	0.82543	0.17457	SQUAMOUS
CL2001032130AA	other	0.17471	0.82529	other
CL2001032132AA (testset)	other	0.0089	0.9911	other
CL2001032134AA	other	0.1184	0.8816	other
CL2001032135AA	other	0.03776	0.96224	other
CL2001032136AA (testset)	other	0.02181	0.97819	other
CL2001032138AA	other	0.00058	0.99942	other
CL2001032141AA	other	0.0718	0.9282	other
CL2001032142AA	other	0.00688	0.99312	other
CL2001032144AA	SQUAMOUS	0.99257	0.00743	SQUAMOUS
CL2001032145AA (testset)	other	0.0038	0.9962	other
CL2001032147AA (testset)	other	0.0018	0.9982	other
CL2001032149AA (testset)	other	0.14957	0.85043	other
CL2001032151AA (testset)	other	0.00198	0.99802	other
CL2001032152AA	other	0.00071	0.99929	other
CL2001032153AA (testset)	SQUAMOUS	0.26698	0.73302	other
CL2001032155AA	other	0.04814	0.95186	other
CL2001032156AA	other	0.06439	0.93561	other
CL2001032202AA	other	0.00109	0.99891	other
CL2001032206AA (testset)	other	0.00903	0.99097	other
CL2001032207AA	SQUAMOUS	0.72817	0.27183	SQUAMOUS
CL2001032209AA (testset)	SQUAMOUS	0.95971	0.04029	SQUAMOUS
CL2001032210AA	other	0.01523	0.98477	other
CL2001032211AA (testset)	other	0.19415	0.80585	other
CL2001032212AA (testset)	other	0.00607	0.99393	other
CL2001032213AA	other	0.07217	0.92783	other
CL2001032214AA	other	0.15722	0.84278	other
CL2001032217AA (testset)	other	0.01379	0.98621	other
CL2001032218AA	SQUAMOUS	0.56463	0.43537	SQUAMOUS
CL2001032219AA	other	0.00322	0.99678	other
CL2001032220AA	other	0.00042	0.99958	other
CL2001032222AA	SQUAMOUS	0.69796	0.30204	SQUAMOUS
CL2001032229AA	other	0.00764	0.99236	other
CL2001032231AA	SQUAMOUS	0.21868	0.78132	other
CL2001032232AA (testset)	other	0.04322	0.95678	other
CL2001032233AA	other	0.00734	0.99266	other
CL2001032238AA (testset)	other	0.00506	0.99494	other
CL2001032239AA	SQUAMOUS	0.71995	0.28005	SQUAMOUS
CL2001032240AA	SQUAMOUS	0.86789	0.13211	SQUAMOUS
CL2001032241AA	other	0.02952	0.97048	other
CL2001032242AA	other	0.01562	0.98438	other
CL2001032243AA (testset)	other	0.00044	0.99956	other
CL2001032248AA	other	0.13698	0.86302	other
CL2001032249AA	other	0.01495	0.98505	other
CL2001032252AA	other	0.35392	0.64608	other
CL2001032254AA (testset)	other	0.00189	0.99811	other
CL2001032255AA (testset)	other	0.00286	0.99714	other
CL2001032256AA	other	0.00125	0.99875	other
CL2001032259AA (testset)	other	0.00155	0.99845	other
CL2001032260AA (testset)	other	0.00527	0.99473	other
CL2001032301AA	other	0.1894	0.8106	other
CL2001032304AA	other	0.00479	0.99521	other
CL2001032305AA (testset)	SQUAMOUS	0.35809	0.64191	other
CL2001032306AA	other	0.03515	0.96485	other
CL2001032307AA	other	0.02328	0.97672	other
CL2001032308AA	other	0.01806	0.98194	other
CL2001032309AA	other	0.00043	0.99957	other
CL2001032310AA	other	0.00148	0.99852	other
CL2001032311AA	other	0.13661	0.86339	other
CL2001032312AA	other	0.00108	0.99892	other
CL2001032313AA	other	0.00578	0.99422	other
CL2001032314AA	other	0.00295	0.99705	other
CL2001032316AA	other	0.00137	0.99863	other
CL2001032601AA	other	0.12666	0.87334	other
CL2001032602AA (testset)	other	0.01798	0.98202	other
CL2001032604AA (testset)	other	0.01367	0.98633	other
CL2001032607AA (testset)	other	0.00288	0.99712	other
CL2001032608AA	SQUAMOUS	0.94061	0.05939	SQUAMOUS
CL2001032610AA	other	0.01578	0.98422	other
CL2001032612AA	other	0.01408	0.98592	other
CL2001032613AA	other	0.01527	0.98473	other
CL2001032614AA (testset)	other	0.01315	0.98685	other
CL2001032616AA	other	0.00249	0.99751	other
CL2001032617AA	other	0.04326	0.95674	other
CL2001032620AA	other	0.00179	0.99821	other
CL2001032625AA	other	0.00308	0.99692	other
CL2001032627AA	SQUAMOUS	0.9708	0.0292	SQUAMOUS
CL2001032628AA	other	0.0044	0.9956	other
CL2001032629AA (testset)	other	0.00058	0.99942	other
CL2001032630AA (testset)	other	0.00128	0.99872	other
CL2001032632AA	other	0.03404	0.96596	other
CL2001032638AA	other	0.12526	0.87474	other
CL2001032640AA	other	0.00512	0.99488	other
CL2001032643AA	other	0.24829	0.75171	other
CL2001032644AA (testset)	SQUAMOUS	0.72555	0.27445	SQUAMOUS
CL2001032647AA	other	0.00075	0.99925	other
CL2001032701AA	other	0.00807	0.99193	other
CL2001032702AA	other	0.3472	0.6528	other
CL2001032703AA	other	0.15169	0.84831	other
CL2001032704AA	other	0.03553	0.96447	other
CL2001032706AA	other	0.0344	0.9656	other
CL2001032709AA (testset)	other	0.01266	0.98734	other
CL2001032716AA	other	0.29192	0.70808	other
CL2001032717AA (testset)	other	0.00092	0.99908	other
CL2001032718AA	other	0.0038	0.9962	other
CL2001032719AA (testset)	SQUAMOUS	0.0821	0.9179	other
CL2001032720AA	other	0.01307	0.98693	other
CL2001032722AA	other	0.00739	0.99261	other
CL2001032724AA	other	0.00019	0.99981	other
CL2001032725AA (testset)	other	0.00036	0.99964	other
CL2001032727AA	other	4e-04	0.9996	other
CL2001032729AA	other	0.01933	0.98067	other
CL2001032730AA	other	0.04769	0.95231	other
CL2001032732AA	SQUAMOUS	0.16967	0.83033	other
CL2001032733AA (testset)	other	0.01287	0.98713	other
CL2001032738AA	other	0.03385	0.96615	other
CL2001032742AA (testset)	other	0.64584	0.35416	SQUAMOUS
CL2001032746AA (testset)	other	0.03482	0.96518	other
CL2001032747AA (testset)	other	0.01803	0.98197	other
CL2001032833AA (testset)	other	0.03738	0.96262	other
CL2001032836AA	other	0.85084	0.14916	SQUAMOUS
CL2001032838AA	other	0.37001	0.62999	other
CL2001032839AA	other	0.02033	0.97967	other
CL2001032841AA	other	0.00049	0.99951	other
CL2001032842AA	other	0.07843	0.92157	other
CL2001032843AA	other	0.00298	0.99702	other
CL2001032845AA (testset)	other	0.00215	0.99785	other
CL2001032846AA (testset)	other	0.0085	0.9915	other
CL2001032847AA (testset)	other	0.00125	0.99875	other
CL2001032848AA	other	0.00752	0.99248	other
CL2001032850AA	other	0.00061	0.99939	other
CL2001032853AA	SQUAMOUS	0.88597	0.11403	SQUAMOUS
CL2001032854AA	other	0.01108	0.98892	other
CL2001032856AA	other	0.12273	0.87727	other
CL2001032857AA	other	0.00035	0.99965	other
CL2001032860AA	other	0.00076	0.99924	other
CL2001040305AA	other	0.0364	0.9636	other
CL2001040306AA	other	0.00047	0.99953	other
CL2001041708AA (testset)	other	0.00034	0.99966	other
CL2001041711AA	other	0.00071	0.99929	other
CL2001041716AA	other	0.00183	0.99817	other
CL2001042501AA	other	7e-05	0.99993	other
CL2001042505AA (testset)	other	0.0347	0.9653	other
CL2001042506AA	other	0.00292	0.99708	other