GO:0006936


GO:0006936

muscle contraction
(annotated genes)

Biological
Process

Parent node

This leaf node contains 59 genes

The following 35 of these are used in classification:

 SymbolGenenameNORMAL scoreother score
33766_atVIPR1 vasoactive intestinal peptide receptor 12.1209-0.1938
32109_atFXYD1 FXYD domain containing ion transport regulator 1 (phospholemman)1.4777-0.1351
38734_atPLN phospholamban0.6018-0.055
32243_g_atCRYAB crystallin, alpha B0.598-0.0547
34873_atNEBL nebulette0.5194-0.0475
32242_atCRYAB crystallin, alpha B0.4434-0.0405
35335_atROCK2 Rho-associated, coiled-coil containing protein kinase 20.4094-0.0374
33302_atSSPN sarcospan (Kras oncogene-associated gene)0.3792-0.0347
33303_atSSPN sarcospan (Kras oncogene-associated gene)0.3506-0.032
41738_atCALD1 caldesmon 10.3238-0.0296
40488_atDMD dystrophin (muscular dystrophy, Duchenne and Becker types)0.3096-0.0283
336_atTBXA2R thromboxane A2 receptor0.3052-0.0279
37996_s_atDMPK dystrophia myotonica-protein kinase0.2584-0.0236
33642_s_atSLC6A8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8-0.2420.0221
41390_atUTRN utrophin (homologous to dystrophin)0.1962-0.0179
33064_atCACNG1 calcium channel, voltage-dependent, gamma subunit 10.1927-0.0176
33133_atFLII flightless I homolog (Drosophila)0.1574-0.0144
39050_atPABPN1 poly(A) binding protein, nuclear 1-0.15450.0141
35627_atSNTA1 syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)-0.14660.0134
37997_r_atDMPK dystrophia myotonica-protein kinase-0.14540.0133
37602_atGAMT guanidinoacetate N-methyltransferase-0.13520.0124
33545_atSCN4A sodium channel, voltage-gated, type IV, alpha-0.11580.0106
36989_atDAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)0.1128-0.0103
33567_atVIP vasoactive intestinal peptide0.1111-0.0102
38225_atKCNH2 potassium voltage-gated channel, subfamily H (eag-related), member 2-0.10830.0099
39834_atCHRNE cholinergic receptor, nicotinic, epsilon polypeptide-0.10020.0092
31638_atGAMT guanidinoacetate N-methyltransferase-0.09320.0085
40527_atKCNQ1 potassium voltage-gated channel, KQT-like subfamily, member 10.0889-0.0081
31554_atCHRND cholinergic receptor, nicotinic, delta polypeptide-0.06770.0062
39624_atLTB4R leukotriene B4 receptor-0.0430.0039
41739_s_atCALD1 caldesmon 10.0392-0.0036
355_s_atFKBP1B FK506 binding protein 1B, 12.6 kDa0.0329-0.003
41731_g_atMYL3 myosin, light polypeptide 3, alkali; ventricular, skeletal, slow-0.01870.0017
38263_atRYR2 ryanodine receptor 2 (cardiac)0.0146-0.0013
37529_atCACNA1H calcium channel, voltage-dependent, alpha 1H subunit-0.00939e-04

Performance on training data

 SensitivitySpecificity
NORMAL0.882350.98925
other0.989250.88235

Performance on test data

 SensitivitySpecificity
NORMAL0.882350.98925
other0.989250.88235

Predictions

 ClassNORMALotherPredictionn
CL2001031606AA (testset)other01 other
CL2001031607AA (testset)other0.000950.99905 other
CL2001031608AA (testset)other0.010550.98945 other
CL2001031609AA (testset)other0.432280.56772 other
CL2001031611AA (testset)other0.000410.99959 other
CL2001031612AA (testset)other0.005990.99401 other
CL2001031613AA (testset)other0.002350.99765 other
CL2001031615AA (testset)other0.000230.99977 other
CL2001031616AA (testset)other0.000380.99962 other
CL2001031618AA (testset)other0.000860.99914 other
CL2001031620AA (testset)other8e-050.99992 other
CL2001031621AA (testset)other4e-050.99996 other
CL2001031622AA (testset)other0.000440.99956 other
CL2001031625AA (testset)other0.000450.99955 other
CL2001031627AA (testset)other0.000620.99938 other
CL2001031628AA (testset)other0.004160.99584 other
CL2001031629AA (testset)other4e-050.99996 other
CL2001031630AA (testset)other1e-050.99999 other
CL2001031631AA (testset)other9e-050.99991 other
CL2001031632AA (testset)other8e-050.99992 other
CL2001031634AA (testset)other0.013510.98649 other
CL2001031635AA (testset)other1e-040.9999 other
CL2001031636AA (testset)other4e-050.99996 other
CL2001032002AA (testset)other0.000120.99988 other
CL2001032005AA (testset)other1e-050.99999 other
CL2001032008AA (testset)other01 other
CL2001032009AA (testset)other1e-050.99999 other
CL2001032010AA (testset)NORMAL0.894240.10576 NORMAL
CL2001032011AA (testset)other0.001490.99851 other
CL2001032012AA (testset)other0.000340.99966 other
CL2001032013AA (testset)other0.008570.99143 other
CL2001032015AA (testset)other0.932690.06731 NORMAL
CL2001032016AA (testset)other0.000520.99948 other
CL2001032019AA (testset)other0.000140.99986 other
CL2001032020AA (testset)other5e-050.99995 other
CL2001032025AA (testset)other3e-040.9997 other
CL2001032026AA (testset)other0.000230.99977 other
CL2001032027AA (testset)other9e-040.9991 other
CL2001032030AA (testset)other1e-040.9999 other
CL2001032031AA (testset)other0.001010.99899 other
CL2001032032AA (testset)other0.006520.99348 other
CL2001032034AA (testset)other0.089240.91076 other
CL2001032036AA (testset)other0.001940.99806 other
CL2001032041AA (testset)NORMAL0.671810.32819 NORMAL
CL2001032043AA (testset)NORMAL0.999750.00025 NORMAL
CL2001032044AA (testset)other3e-050.99997 other
CL2001032045AA (testset)NORMAL0.993880.00612 NORMAL
CL2001032046AA (testset)NORMAL0.787820.21218 NORMAL
CL2001032101AA (testset)other0.000230.99977 other
CL2001032102AA (testset)NORMAL0.99991e-04 NORMAL
CL2001032103AA (testset)other8e-050.99992 other
CL2001032104AA (testset)other3e-050.99997 other
CL2001032105AA (testset)other0.000420.99958 other
CL2001032107AA (testset)other3e-050.99997 other
CL2001032108AA (testset)other0.000190.99981 other
CL2001032109AA (testset)other0.047110.95289 other
CL2001032110AA (testset)other0.007760.99224 other
CL2001032111AA (testset)other0.000990.99901 other
CL2001032113AA (testset)other2e-050.99998 other
CL2001032114AA (testset)other0.001180.99882 other
CL2001032115AA (testset)other0.000210.99979 other
CL2001032116AA (testset)other2e-040.9998 other
CL2001032117AA (testset)other6e-050.99994 other
CL2001032121AA (testset)other0.000140.99986 other
CL2001032122AA (testset)other7e-050.99993 other
CL2001032124AA (testset)other0.001750.99825 other
CL2001032125AA (testset)other0.054770.94523 other
CL2001032127AA (testset)other6e-050.99994 other
CL2001032128AA (testset)NORMAL0.998320.00168 NORMAL
CL2001032129AA (testset)other0.004660.99534 other
CL2001032130AA (testset)other0.000770.99923 other
CL2001032132AA (testset)other0.001690.99831 other
CL2001032134AA (testset)other0.008820.99118 other
CL2001032135AA (testset)other0.000770.99923 other
CL2001032136AA (testset)other0.000910.99909 other
CL2001032138AA (testset)other0.000470.99953 other
CL2001032141AA (testset)other2e-040.9998 other
CL2001032142AA (testset)other0.000390.99961 other
CL2001032144AA (testset)other01 other
CL2001032145AA (testset)other0.0020.998 other
CL2001032147AA (testset)NORMAL0.999230.00077 NORMAL
CL2001032149AA (testset)other0.002590.99741 other
CL2001032151AA (testset)other0.023180.97682 other
CL2001032152AA (testset)other3e-050.99997 other
CL2001032153AA (testset)other0.00210.9979 other
CL2001032155AA (testset)other0.025240.97476 other
CL2001032156AA (testset)other0.002840.99716 other
CL2001032202AA (testset)NORMAL0.999991e-05 NORMAL
CL2001032206AA (testset)NORMAL0.937020.06298 NORMAL
CL2001032207AA (testset)other0.000190.99981 other
CL2001032209AA (testset)other3e-050.99997 other
CL2001032210AA (testset)other0.000590.99941 other
CL2001032211AA (testset)other2e-050.99998 other
CL2001032212AA (testset)other6e-050.99994 other
CL2001032213AA (testset)other0.06750.9325 other
CL2001032214AA (testset)other0.020190.97981 other
CL2001032217AA (testset)other2e-050.99998 other
CL2001032218AA (testset)other0.000160.99984 other
CL2001032219AA (testset)other0.000570.99943 other
CL2001032220AA (testset)NORMAL0.998910.00109 NORMAL
CL2001032222AA (testset)other8e-050.99992 other
CL2001032229AA (testset)other0.000180.99982 other
CL2001032231AA (testset)other0.006640.99336 other
CL2001032232AA (testset)other0.001270.99873 other
CL2001032233AA (testset)other3e-050.99997 other
CL2001032238AA (testset)other0.000950.99905 other
CL2001032239AA (testset)other2e-050.99998 other
CL2001032240AA (testset)other0.000120.99988 other
CL2001032241AA (testset)other0.000780.99922 other
CL2001032242AA (testset)other1e-040.9999 other
CL2001032243AA (testset)other0.001160.99884 other
CL2001032248AA (testset)other01 other
CL2001032249AA (testset)other4e-040.9996 other
CL2001032252AA (testset)other0.007310.99269 other
CL2001032254AA (testset)other6e-040.9994 other
CL2001032255AA (testset)other3e-050.99997 other
CL2001032256AA (testset)NORMAL0.133340.86666 other
CL2001032259AA (testset)other1e-050.99999 other
CL2001032260AA (testset)other0.000170.99983 other
CL2001032301AA (testset)other0.001180.99882 other
CL2001032304AA (testset)NORMAL0.617830.38217 NORMAL
CL2001032305AA (testset)other0.00110.9989 other
CL2001032306AA (testset)other0.000860.99914 other
CL2001032307AA (testset)other0.011740.98826 other
CL2001032308AA (testset)other0.000360.99964 other
CL2001032309AA (testset)other5e-050.99995 other
CL2001032310AA (testset)other5e-050.99995 other
CL2001032311AA (testset)other1e-050.99999 other
CL2001032312AA (testset)other1e-040.9999 other
CL2001032313AA (testset)other0.000340.99966 other
CL2001032314AA (testset)other1e-050.99999 other
CL2001032316AA (testset)other3e-050.99997 other
CL2001032601AA (testset)other0.000270.99973 other
CL2001032602AA (testset)other0.000160.99984 other
CL2001032604AA (testset)other7e-050.99993 other
CL2001032607AA (testset)other0.007070.99293 other
CL2001032608AA (testset)other0.000390.99961 other
CL2001032610AA (testset)other0.000110.99989 other
CL2001032612AA (testset)other3e-040.9997 other
CL2001032613AA (testset)other5e-050.99995 other
CL2001032614AA (testset)other3e-050.99997 other
CL2001032616AA (testset)other0.000130.99987 other
CL2001032617AA (testset)other7e-050.99993 other
CL2001032620AA (testset)other0.000120.99988 other
CL2001032625AA (testset)other2e-050.99998 other
CL2001032627AA (testset)other0.001170.99883 other
CL2001032628AA (testset)other0.000140.99986 other
CL2001032629AA (testset)other0.000180.99982 other
CL2001032630AA (testset)other0.028990.97101 other
CL2001032632AA (testset)other8e-050.99992 other
CL2001032638AA (testset)other0.035480.96452 other
CL2001032640AA (testset)other01 other
CL2001032643AA (testset)other7e-050.99993 other
CL2001032644AA (testset)other0.000170.99983 other
CL2001032647AA (testset)other0.000270.99973 other
CL2001032701AA (testset)other9e-050.99991 other
CL2001032702AA (testset)other0.000810.99919 other
CL2001032703AA (testset)other1e-050.99999 other
CL2001032704AA (testset)other0.001030.99897 other
CL2001032706AA (testset)other0.000310.99969 other
CL2001032709AA (testset)other0.000780.99922 other
CL2001032716AA (testset)other0.001650.99835 other
CL2001032717AA (testset)other0.000780.99922 other
CL2001032718AA (testset)NORMAL0.999190.00081 NORMAL
CL2001032719AA (testset)other0.010210.98979 other
CL2001032720AA (testset)other2e-050.99998 other
CL2001032722AA (testset)other0.0060.994 other
CL2001032724AA (testset)NORMAL0.045130.95487 other
CL2001032725AA (testset)NORMAL10 NORMAL
CL2001032727AA (testset)NORMAL0.984190.01581 NORMAL
CL2001032729AA (testset)other2e-050.99998 other
CL2001032730AA (testset)other1e-050.99999 other
CL2001032732AA (testset)other4e-050.99996 other
CL2001032733AA (testset)other0.00180.9982 other
CL2001032738AA (testset)other0.000560.99944 other
CL2001032742AA (testset)other5e-050.99995 other
CL2001032746AA (testset)other8e-040.9992 other
CL2001032747AA (testset)other0.000340.99966 other
CL2001032833AA (testset)other1e-040.9999 other
CL2001032836AA (testset)other3e-050.99997 other
CL2001032838AA (testset)other0.000390.99961 other
CL2001032839AA (testset)other0.000120.99988 other
CL2001032841AA (testset)other9e-050.99991 other
CL2001032842AA (testset)other2e-050.99998 other
CL2001032843AA (testset)other5e-050.99995 other
CL2001032845AA (testset)other0.000110.99989 other
CL2001032846AA (testset)other0.011440.98856 other
CL2001032847AA (testset)other0.397580.60242 other
CL2001032848AA (testset)other0.945960.05404 NORMAL
CL2001032850AA (testset)other0.000280.99972 other
CL2001032853AA (testset)other0.041010.95899 other
CL2001032854AA (testset)other5e-050.99995 other
CL2001032856AA (testset)other0.000350.99965 other
CL2001032857AA (testset)other0.000320.99968 other
CL2001032860AA (testset)other0.017550.98245 other
CL2001040305AA (testset)other3e-050.99997 other
CL2001040306AA (testset)other8e-050.99992 other
CL2001041708AA (testset)other5e-050.99995 other
CL2001041711AA (testset)other0.000110.99989 other
CL2001041716AA (testset)other0.004750.99525 other
CL2001042501AA (testset)other0.000610.99939 other
CL2001042505AA (testset)other0.000750.99925 other
CL2001042506AA (testset)other0.000520.99948 other

 


Generated by StAM on Tue Sep 7 18:13:40 2004