GO:0006457


GO:0006457

protein folding
(annotated genes)

Biological
Process

Parent node

This leaf node contains 94 genes

The following 78 of these are used in classification:

 SymbolGenenameNORMAL scoreother score
33137_atLTBP4 latent transforming growth factor beta binding protein 41.4906-0.1362
33800_atADCY9 adenylate cyclase 90.8748-0.08
40774_atCCT3 chaperonin containing TCP1, subunit 3 (gamma)-0.74990.0685
32243_g_atCRYAB crystallin, alpha B0.6473-0.0592
1468_atTRAP1 heat shock protein 75-0.59090.054
1817_atPFDN5 prefoldin 50.5883-0.0538
37720_atHSPD1 heat shock 60kDa protein 1 (chaperonin)-0.58730.0537
40417_atCCT5 chaperonin containing TCP1, subunit 5 (epsilon)-0.57970.053
32242_atCRYAB crystallin, alpha B0.5009-0.0458
752_s_atDNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 10.4889-0.0447
36194_atLRPAP1 low density lipoprotein receptor-related protein associated protein 10.4862-0.0444
1161_atHSPCB heat shock 90kDa protein 1, beta-0.43690.0399
39118_atDNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 10.4357-0.0398
33984_atHSPCB heat shock 90kDa protein 1, beta-0.40880.0374
38729_atFKBP4 FK506 binding protein 4, 59kDa-0.38310.035
31826_atKIAA0674 KIAA0674 protein0.3747-0.0343
38416_atCCT6A chaperonin containing TCP1, subunit 6A (zeta 1)-0.30690.028
33884_s_atUBE4B ubiquitination factor E4B (UFD2 homolog, yeast)-0.29330.0268
35759_atCCT2 chaperonin containing TCP1, subunit 2 (beta)-0.28530.0261
39767_atCCT8 chaperonin containing TCP1, subunit 8 (theta)-0.28210.0258
34841_atCLN3 ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)-0.27130.0248
442_atTRA1 tumor rejection antigen (gp96) 1-0.25940.0237
33409_atFKBP2 FK506 binding protein 2, 13kDa-0.25040.0229
497_atCLN3 ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)0.2421-0.0221
40840_atPPIF peptidylprolyl isomerase F (cyclophilin F)-0.23030.021
38720_atCCT7 chaperonin containing TCP1, subunit 7 (eta)-0.21440.0196
33188_atPPIL2 peptidylprolyl isomerase (cyclophilin)-like 20.1942-0.0178
37632_s_atZRF1 zuotin related factor 1-0.17570.0161
276_atDNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 10.1747-0.016
37321_atTTC1 tetratricopeptide repeat domain 10.1683-0.0154
40053_atTXNDC4 thioredoxin domain containing 4 (endoplasmic reticulum)0.1627-0.0149
35963_atHKE2 HLA class II region expressed gene KE2-0.15310.014
37044_atPDIR for protein disulfide isomerase-related-0.1370.0125
36463_atBAG5 BCL2-associated athanogene 50.1357-0.0124
33313_g_atCRYAA crystallin, alpha A-0.13070.0119
39111_s_atPPIL2 peptidylprolyl isomerase (cyclophilin)-like 2-0.130.0119
40600_atDNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4-0.1290.0118
35269_atHSPBP1 hsp70-interacting protein-0.12680.0116
40421_atPIN1 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 10.1263-0.0115
355_s_atFKBP1B FK506 binding protein 1B, 12.6 kDa0.1211-0.0111
38813_atTSC2 tuberous sclerosis 2-0.11560.0106
34070_s_atPDIP protein disulfide isomerase, pancreatic-0.110.0101
35448_atPPIL2 peptidylprolyl isomerase (cyclophilin)-like 2-0.10470.0096
34791_atTCP1 t-complex 1-0.10330.0094
37385_atPPIG peptidyl-prolyl isomerase G (cyclophilin G)-0.09910.0091
38011_atC19orf2 chromosome 19 open reading frame 2-0.09760.0089
38352_atPPIH peptidyl prolyl isomerase H (cyclophilin H)-0.09760.0089
33311_atCRYAA crystallin, alpha A-0.09440.0086
36586_atAIP aryl hydrocarbon receptor interacting protein0.0905-0.0083
41003_atPFDN4 prefoldin 4-0.08770.008
1180_g_atHSPA8 heat shock 70kDa protein 80.0874-0.008
32316_s_atHSPCA heat shock 90kDa protein 1, alpha-0.08230.0075
34734_atLMAN1 lectin, mannose-binding, 1-0.08070.0074
38890_atAPCS amyloid P component, serum-0.07440.0068
32788_atRANBP2 RAN binding protein 20.0717-0.0065
38632_atDNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 50.0713-0.0065
34365_atPPIE peptidylprolyl isomerase E (cyclophilin E)0.07-0.0064
1179_atHSPA8 heat shock 70kDa protein 8-0.06910.0063
33985_s_atHSPCB heat shock 90kDa protein 1, beta-0.06870.0063
39786_atGRPEL1 GrpE-like 1, mitochondrial (E. coli)-0.06480.0059
35291_atBAG2 BCL2-associated athanogene 20.0639-0.0058
33533_atDNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 40.0617-0.0056
37422_atPPIC peptidylprolyl isomerase C (cyclophilin C)-0.05440.005
37453_atCLPX ClpX caseinolytic protease X homolog (E. coli)-0.05390.0049
40830_atDNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4-0.04960.0045
34366_g_atPPIE peptidylprolyl isomerase E (cyclophilin E)-0.04720.0043
158_atDNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 40.0413-0.0038
40354_atAPG-1 heat shock protein (hsp110 family)-0.0390.0036
36541_atDNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 30.0344-0.0031
948_s_atPPID peptidylprolyl isomerase D (cyclophilin D)0.0332-0.003
1640_atST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)0.0319-0.0029
338_atATF6 activating transcription factor 6-0.03140.0029
35467_g_atDNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 120.023-0.0021
34349_atSEC63 SEC63-like (S. cerevisiae)0.017-0.0016
36945_atC12orf8 chromosome 12 open reading frame 8-0.01520.0014
34364_atPPIE peptidylprolyl isomerase E (cyclophilin E)0.0117-0.0011
41339_atUBE4B ubiquitination factor E4B (UFD2 homolog, yeast)0.009-8e-04
37365_atDNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 20.0073-7e-04

Performance on training data

 SensitivitySpecificity
NORMAL0.882350.98387
other0.983870.88235

Performance on test data

 SensitivitySpecificity
NORMAL0.882350.98387
other0.983870.88235

Predictions

 ClassNORMALotherPredictionn
CL2001031606AA (testset)other01 other
CL2001031607AA (testset)other0.001690.99831 other
CL2001031608AA (testset)other0.064370.93563 other
CL2001031609AA (testset)other0.017420.98258 other
CL2001031611AA (testset)other0.000460.99954 other
CL2001031612AA (testset)other1e-050.99999 other
CL2001031613AA (testset)other0.022940.97706 other
CL2001031615AA (testset)other0.001770.99823 other
CL2001031616AA (testset)other3e-050.99997 other
CL2001031618AA (testset)other0.060530.93947 other
CL2001031620AA (testset)other4e-050.99996 other
CL2001031621AA (testset)other4e-050.99996 other
CL2001031622AA (testset)other01 other
CL2001031625AA (testset)other0.000190.99981 other
CL2001031627AA (testset)other0.006020.99398 other
CL2001031628AA (testset)other0.000710.99929 other
CL2001031629AA (testset)other1e-040.9999 other
CL2001031630AA (testset)other0.000420.99958 other
CL2001031631AA (testset)other0.001130.99887 other
CL2001031632AA (testset)other2e-050.99998 other
CL2001031634AA (testset)other0.000620.99938 other
CL2001031635AA (testset)other0.00490.9951 other
CL2001031636AA (testset)other4e-050.99996 other
CL2001032002AA (testset)other0.001040.99896 other
CL2001032005AA (testset)other01 other
CL2001032008AA (testset)other01 other
CL2001032009AA (testset)other1e-040.9999 other
CL2001032010AA (testset)NORMAL0.535120.46488 NORMAL
CL2001032011AA (testset)other0.01460.9854 other
CL2001032012AA (testset)other0.006220.99378 other
CL2001032013AA (testset)other0.028640.97136 other
CL2001032015AA (testset)other0.278880.72112 other
CL2001032016AA (testset)other2e-050.99998 other
CL2001032019AA (testset)other9e-050.99991 other
CL2001032020AA (testset)other1e-040.9999 other
CL2001032025AA (testset)other0.000310.99969 other
CL2001032026AA (testset)other0.001360.99864 other
CL2001032027AA (testset)other0.001680.99832 other
CL2001032030AA (testset)other3e-050.99997 other
CL2001032031AA (testset)other0.032220.96778 other
CL2001032032AA (testset)other0.046770.95323 other
CL2001032034AA (testset)other0.709280.29072 NORMAL
CL2001032036AA (testset)other0.000520.99948 other
CL2001032041AA (testset)NORMAL0.942380.05762 NORMAL
CL2001032043AA (testset)NORMAL0.999150.00085 NORMAL
CL2001032044AA (testset)other0.000770.99923 other
CL2001032045AA (testset)NORMAL0.988470.01153 NORMAL
CL2001032046AA (testset)NORMAL0.984070.01593 NORMAL
CL2001032101AA (testset)other0.005080.99492 other
CL2001032102AA (testset)NORMAL0.961140.03886 NORMAL
CL2001032103AA (testset)other0.007430.99257 other
CL2001032104AA (testset)other0.000150.99985 other
CL2001032105AA (testset)other0.000130.99987 other
CL2001032107AA (testset)other7e-050.99993 other
CL2001032108AA (testset)other0.062550.93745 other
CL2001032109AA (testset)other0.51130.4887 NORMAL
CL2001032110AA (testset)other0.012970.98703 other
CL2001032111AA (testset)other0.035420.96458 other
CL2001032113AA (testset)other9e-050.99991 other
CL2001032114AA (testset)other0.013960.98604 other
CL2001032115AA (testset)other0.021270.97873 other
CL2001032116AA (testset)other3e-050.99997 other
CL2001032117AA (testset)other01 other
CL2001032121AA (testset)other2e-050.99998 other
CL2001032122AA (testset)other4e-050.99996 other
CL2001032124AA (testset)other0.040620.95938 other
CL2001032125AA (testset)other0.000150.99985 other
CL2001032127AA (testset)other0.000160.99984 other
CL2001032128AA (testset)NORMAL0.994520.00548 NORMAL
CL2001032129AA (testset)other0.000160.99984 other
CL2001032130AA (testset)other1e-040.9999 other
CL2001032132AA (testset)other8e-050.99992 other
CL2001032134AA (testset)other0.000260.99974 other
CL2001032135AA (testset)other0.000590.99941 other
CL2001032136AA (testset)other3e-050.99997 other
CL2001032138AA (testset)other0.001040.99896 other
CL2001032141AA (testset)other2e-050.99998 other
CL2001032142AA (testset)other0.000680.99932 other
CL2001032144AA (testset)other5e-050.99995 other
CL2001032145AA (testset)other0.001360.99864 other
CL2001032147AA (testset)NORMAL0.989470.01053 NORMAL
CL2001032149AA (testset)other0.002160.99784 other
CL2001032151AA (testset)other0.001920.99808 other
CL2001032152AA (testset)other0.005290.99471 other
CL2001032153AA (testset)other0.008430.99157 other
CL2001032155AA (testset)other0.018160.98184 other
CL2001032156AA (testset)other0.004150.99585 other
CL2001032202AA (testset)NORMAL0.999130.00087 NORMAL
CL2001032206AA (testset)NORMAL0.945740.05426 NORMAL
CL2001032207AA (testset)other0.000180.99982 other
CL2001032209AA (testset)other0.000430.99957 other
CL2001032210AA (testset)other0.006150.99385 other
CL2001032211AA (testset)other01 other
CL2001032212AA (testset)other5e-050.99995 other
CL2001032213AA (testset)other0.242920.75708 other
CL2001032214AA (testset)other0.008660.99134 other
CL2001032217AA (testset)other0.003670.99633 other
CL2001032218AA (testset)other0.000680.99932 other
CL2001032219AA (testset)other0.0020.998 other
CL2001032220AA (testset)NORMAL0.999080.00092 NORMAL
CL2001032222AA (testset)other2e-050.99998 other
CL2001032229AA (testset)other0.002580.99742 other
CL2001032231AA (testset)other0.048840.95116 other
CL2001032232AA (testset)other0.001930.99807 other
CL2001032233AA (testset)other0.000160.99984 other
CL2001032238AA (testset)other0.006710.99329 other
CL2001032239AA (testset)other01 other
CL2001032240AA (testset)other0.000170.99983 other
CL2001032241AA (testset)other0.001430.99857 other
CL2001032242AA (testset)other7e-050.99993 other
CL2001032243AA (testset)other0.002230.99777 other
CL2001032248AA (testset)other2e-040.9998 other
CL2001032249AA (testset)other8e-050.99992 other
CL2001032252AA (testset)other0.000530.99947 other
CL2001032254AA (testset)other0.000330.99967 other
CL2001032255AA (testset)other01 other
CL2001032256AA (testset)NORMAL0.016490.98351 other
CL2001032259AA (testset)other0.072450.92755 other
CL2001032260AA (testset)other0.020130.97987 other
CL2001032301AA (testset)other0.000140.99986 other
CL2001032304AA (testset)NORMAL0.056990.94301 other
CL2001032305AA (testset)other0.000330.99967 other
CL2001032306AA (testset)other0.000580.99942 other
CL2001032307AA (testset)other0.09420.9058 other
CL2001032308AA (testset)other0.002960.99704 other
CL2001032309AA (testset)other0.001180.99882 other
CL2001032310AA (testset)other0.015350.98465 other
CL2001032311AA (testset)other01 other
CL2001032312AA (testset)other0.000640.99936 other
CL2001032313AA (testset)other0.004730.99527 other
CL2001032314AA (testset)other1e-050.99999 other
CL2001032316AA (testset)other2e-050.99998 other
CL2001032601AA (testset)other0.000530.99947 other
CL2001032602AA (testset)other0.009690.99031 other
CL2001032604AA (testset)other4e-050.99996 other
CL2001032607AA (testset)other0.010530.98947 other
CL2001032608AA (testset)other0.01270.9873 other
CL2001032610AA (testset)other0.000210.99979 other
CL2001032612AA (testset)other0.003430.99657 other
CL2001032613AA (testset)other0.000220.99978 other
CL2001032614AA (testset)other01 other
CL2001032616AA (testset)other0.02250.9775 other
CL2001032617AA (testset)other9e-050.99991 other
CL2001032620AA (testset)other0.000910.99909 other
CL2001032625AA (testset)other0.001430.99857 other
CL2001032627AA (testset)other0.000630.99937 other
CL2001032628AA (testset)other9e-040.9991 other
CL2001032629AA (testset)other0.033030.96697 other
CL2001032630AA (testset)other0.020450.97955 other
CL2001032632AA (testset)other0.001750.99825 other
CL2001032638AA (testset)other0.000680.99932 other
CL2001032640AA (testset)other7e-050.99993 other
CL2001032643AA (testset)other6e-050.99994 other
CL2001032644AA (testset)other2e-050.99998 other
CL2001032647AA (testset)other0.001450.99855 other
CL2001032701AA (testset)other0.001040.99896 other
CL2001032702AA (testset)other5e-050.99995 other
CL2001032703AA (testset)other1e-040.9999 other
CL2001032704AA (testset)other0.001760.99824 other
CL2001032706AA (testset)other2e-050.99998 other
CL2001032709AA (testset)other0.006660.99334 other
CL2001032716AA (testset)other0.000580.99942 other
CL2001032717AA (testset)other0.000250.99975 other
CL2001032718AA (testset)NORMAL0.99410.0059 NORMAL
CL2001032719AA (testset)other0.0020.998 other
CL2001032720AA (testset)other0.003090.99691 other
CL2001032722AA (testset)other0.012870.98713 other
CL2001032724AA (testset)NORMAL0.680570.31943 NORMAL
CL2001032725AA (testset)NORMAL0.997420.00258 NORMAL
CL2001032727AA (testset)NORMAL0.988860.01114 NORMAL
CL2001032729AA (testset)other0.007170.99283 other
CL2001032730AA (testset)other0.001080.99892 other
CL2001032732AA (testset)other2e-050.99998 other
CL2001032733AA (testset)other0.000210.99979 other
CL2001032738AA (testset)other2e-050.99998 other
CL2001032742AA (testset)other0.000160.99984 other
CL2001032746AA (testset)other0.001050.99895 other
CL2001032747AA (testset)other1e-040.9999 other
CL2001032833AA (testset)other3e-040.9997 other
CL2001032836AA (testset)other01 other
CL2001032838AA (testset)other0.001390.99861 other
CL2001032839AA (testset)other5e-040.9995 other
CL2001032841AA (testset)other0.000910.99909 other
CL2001032842AA (testset)other5e-050.99995 other
CL2001032843AA (testset)other1e-050.99999 other
CL2001032845AA (testset)other0.005940.99406 other
CL2001032846AA (testset)other0.000350.99965 other
CL2001032847AA (testset)other0.09380.9062 other
CL2001032848AA (testset)other0.93360.0664 NORMAL
CL2001032850AA (testset)other0.001850.99815 other
CL2001032853AA (testset)other0.069510.93049 other
CL2001032854AA (testset)other0.007670.99233 other
CL2001032856AA (testset)other0.017790.98221 other
CL2001032857AA (testset)other0.000680.99932 other
CL2001032860AA (testset)other0.020340.97966 other
CL2001040305AA (testset)other0.000140.99986 other
CL2001040306AA (testset)other0.007270.99273 other
CL2001041708AA (testset)other0.000220.99978 other
CL2001041711AA (testset)other0.054640.94536 other
CL2001041716AA (testset)other4e-050.99996 other
CL2001042501AA (testset)other0.003880.99612 other
CL2001042505AA (testset)other0.000110.99989 other
CL2001042506AA (testset)other0.017820.98218 other

 


Generated by StAM on Tue Sep 7 18:13:22 2004