GO:0016055

GO:0016055

Wnt receptor signaling pathway (annotated genes)

Biological Process

Parent node

GO:0016055	Wnt receptor signaling pathway

This leaf node contains 46 genes

The following 46 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
35178_at	WIF1	WNT inhibitory factor 1	1.4645	-0.1299
41338_at	AES	amino-terminal enhancer of split	0.693	-0.0615
40777_at	CTNNB1	catenin (cadherin-associated protein), beta 1, 88kDa	0.4996	-0.0443
32174_at	SLC9A3R1	solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 regulatory factor 1	-0.4507	0.04
35155_at	CSNK1G2	casein kinase 1, gamma 2	-0.4076	0.0362
594_s_at	CSNK2A1	casein kinase 2, alpha 1 polypeptide	-0.3872	0.0343
361_at	BCL9	B-cell CLL/lymphoma 9	-0.3842	0.0341
41337_at	AES	amino-terminal enhancer of split	0.3741	-0.0332
32843_s_at	CSNK2B	casein kinase 2, beta polypeptide	-0.3714	0.0329
447_g_at	CSNK1G2	casein kinase 1, gamma 2	0.3668	-0.0325
410_s_at	CSNK2B	casein kinase 2, beta polypeptide	-0.3509	0.0311
40258_at	CSNK2A1	casein kinase 2, alpha 1 polypeptide	-0.3379	0.03
40184_at	CSNK1A1	casein kinase 1, alpha 1	0.2982	-0.0265
34997_r_at	FZD5	frizzled homolog 5 (Drosophila)	0.2938	-0.0261
493_at	CSNK1D	casein kinase 1, delta	-0.2768	0.0246
32025_at	TCF7L2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.2644	-0.0235
41725_at	CSNK1G2	casein kinase 1, gamma 2	0.2603	-0.0231
39171_at	CTNNBIP1	catenin, beta interacting protein 1	0.2363	-0.021
537_f_at	FBXW3	F-box and WD-40 domain protein 3	-0.2175	0.0193
37629_at	CSNK2A2	casein kinase 2, alpha prime polypeptide	-0.2137	0.019
36949_at	CSNK1D	casein kinase 1, delta	0.2137	-0.019
33217_at	CTNNBIP1	catenin, beta interacting protein 1	-0.2082	0.0185
446_at	CSNK1G2	casein kinase 1, gamma 2	0.2057	-0.0182
517_at	FBXW3	F-box and WD-40 domain protein 3	-0.1999	0.0177
40173_at	FRAT2	frequently rearranged in advanced T-cell lymphomas 2	-0.1994	0.0177
38300_at	FZD1	frizzled homolog 1 (Drosophila)	0.1982	-0.0176
34184_at	APCL	adenomatous polyposis coli like	-0.1936	0.0172
36021_at	LEF1	lymphoid enhancer-binding factor 1	-0.1743	0.0155
36235_at	CSNK2A1	casein kinase 2, alpha 1 polypeptide	-0.156	0.0138
32359_at	WISP1	WNT1 inducible signaling pathway protein 1	-0.1459	0.0129
32854_at	FBXW1B	F-box and WD-40 domain protein 1B	0.144	-0.0128
40171_at	FRAT2	frequently rearranged in advanced T-cell lymphomas 2	-0.1216	0.0108
35977_at	DKK1	dickkopf homolog 1 (Xenopus laevis)	-0.1073	0.0095
36799_at	FZD2	frizzled homolog 2 (Drosophila)	-0.1064	0.0094
33594_at	DKK4	dickkopf homolog 4 (Xenopus laevis)	-0.099	0.0088
32649_at	TCF7	transcription factor 7 (T-cell specific, HMG-box)	0.0987	-0.0088
40172_g_at	FRAT2	frequently rearranged in advanced T-cell lymphomas 2	-0.0971	0.0086
35433_s_at	APC	adenomatosis polyposis coli	0.0933	-0.0083
40645_at	GSK3B	glycogen synthase kinase 3 beta	0.0799	-0.0071
628_at	FZD2	frizzled homolog 2 (Drosophila)	-0.0728	0.0065
1253_at	GSK3B	glycogen synthase kinase 3 beta	0.0647	-0.0057
32015_at	PYGO1	pygopus 1	-0.0442	0.0039
31440_at	TCF7	transcription factor 7 (T-cell specific, HMG-box)	0.0323	-0.0029
40230_at	FRZB	frizzled-related protein	0.0322	-0.0029
36182_at	APC	adenomatosis polyposis coli	0.0231	-0.0021
1912_s_at	APC	adenomatosis polyposis coli	7e-04	-1e-04

Performance on training data

• Error rate: 0.02963
• Performance: 0.18995
• Redundancy: 3.59478

	Sensitivity	Specificity
NORMAL	0.72727	0.99194
other	0.99194	0.72727

Performance on test data

• Error rate: 0.04412
• Performance: 0.30351
• Redundancy: 3.64216

	Sensitivity	Specificity
NORMAL	0.66667	0.98387
other	0.98387	0.66667

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	2e-04	0.9998	other
CL2001031607AA	other	0.00732	0.99268	other
CL2001031608AA	other	0.00789	0.99211	other
CL2001031609AA	other	0.0333	0.9667	other
CL2001031611AA	other	0.00244	0.99756	other
CL2001031612AA	other	0.04362	0.95638	other
CL2001031613AA	other	0.03557	0.96443	other
CL2001031615AA	other	0.00034	0.99966	other
CL2001031616AA (testset)	other	0.00086	0.99914	other
CL2001031618AA	other	0.00161	0.99839	other
CL2001031620AA (testset)	other	0.00235	0.99765	other
CL2001031621AA (testset)	other	0.00014	0.99986	other
CL2001031622AA	other	0.00029	0.99971	other
CL2001031625AA	other	0.01037	0.98963	other
CL2001031627AA (testset)	other	0.00064	0.99936	other
CL2001031628AA (testset)	other	0.00257	0.99743	other
CL2001031629AA	other	0.00059	0.99941	other
CL2001031630AA (testset)	other	0.01218	0.98782	other
CL2001031631AA	other	0.00629	0.99371	other
CL2001031632AA	other	0.00148	0.99852	other
CL2001031634AA	other	0.1939	0.8061	other
CL2001031635AA	other	0.00252	0.99748	other
CL2001031636AA	other	0.00303	0.99697	other
CL2001032002AA	other	0.32571	0.67429	other
CL2001032005AA	other	0.00018	0.99982	other
CL2001032008AA	other	0.00025	0.99975	other
CL2001032009AA (testset)	other	0.00105	0.99895	other
CL2001032010AA (testset)	NORMAL	0.07693	0.92307	other
CL2001032011AA (testset)	other	0.00243	0.99757	other
CL2001032012AA (testset)	other	0.00612	0.99388	other
CL2001032013AA (testset)	other	0.01568	0.98432	other
CL2001032015AA	other	0.18886	0.81114	other
CL2001032016AA (testset)	other	0.01488	0.98512	other
CL2001032019AA	other	0.00709	0.99291	other
CL2001032020AA (testset)	other	0.00098	0.99902	other
CL2001032025AA	other	0.00296	0.99704	other
CL2001032026AA	other	0.07156	0.92844	other
CL2001032027AA	other	0.00726	0.99274	other
CL2001032030AA	other	0.00189	0.99811	other
CL2001032031AA (testset)	other	0.02998	0.97002	other
CL2001032032AA	other	0.01031	0.98969	other
CL2001032034AA	other	0.02275	0.97725	other
CL2001032036AA	other	0.00161	0.99839	other
CL2001032041AA	NORMAL	0.59767	0.40233	NORMAL
CL2001032043AA	NORMAL	0.95947	0.04053	NORMAL
CL2001032044AA	other	0.0034	0.9966	other
CL2001032045AA (testset)	NORMAL	0.54276	0.45724	NORMAL
CL2001032046AA	NORMAL	0.74889	0.25111	NORMAL
CL2001032101AA	other	0.02055	0.97945	other
CL2001032102AA	NORMAL	0.24759	0.75241	other
CL2001032103AA	other	0.01915	0.98085	other
CL2001032104AA	other	0.00635	0.99365	other
CL2001032105AA	other	0.00145	0.99855	other
CL2001032107AA	other	0.00134	0.99866	other
CL2001032108AA	other	0.00239	0.99761	other
CL2001032109AA (testset)	other	0.03951	0.96049	other
CL2001032110AA	other	0.01116	0.98884	other
CL2001032111AA	other	0.04897	0.95103	other
CL2001032113AA (testset)	other	0.00231	0.99769	other
CL2001032114AA	other	0.00525	0.99475	other
CL2001032115AA (testset)	other	0.00452	0.99548	other
CL2001032116AA (testset)	other	0.00699	0.99301	other
CL2001032117AA	other	0.00104	0.99896	other
CL2001032121AA	other	0.00221	0.99779	other
CL2001032122AA	other	0.00055	0.99945	other
CL2001032124AA	other	0.00213	0.99787	other
CL2001032125AA	other	0.00013	0.99987	other
CL2001032127AA (testset)	other	0.1015	0.8985	other
CL2001032128AA (testset)	NORMAL	0.54499	0.45501	NORMAL
CL2001032129AA (testset)	other	0.00029	0.99971	other
CL2001032130AA	other	0.00017	0.99983	other
CL2001032132AA	other	0.0275	0.9725	other
CL2001032134AA (testset)	other	0.01206	0.98794	other
CL2001032135AA	other	0.00547	0.99453	other
CL2001032136AA (testset)	other	0.00539	0.99461	other
CL2001032138AA (testset)	other	0.00324	0.99676	other
CL2001032141AA (testset)	other	0.00125	0.99875	other
CL2001032142AA	other	0.00045	0.99955	other
CL2001032144AA	other	0.00403	0.99597	other
CL2001032145AA	other	0.01023	0.98977	other
CL2001032147AA	NORMAL	0.84777	0.15223	NORMAL
CL2001032149AA (testset)	other	0.01016	0.98984	other
CL2001032151AA	other	0.01007	0.98993	other
CL2001032152AA	other	0.00936	0.99064	other
CL2001032153AA	other	0.00041	0.99959	other
CL2001032155AA	other	0.16664	0.83336	other
CL2001032156AA (testset)	other	0.00748	0.99252	other
CL2001032202AA (testset)	NORMAL	0.76821	0.23179	NORMAL
CL2001032206AA	NORMAL	0.64506	0.35494	NORMAL
CL2001032207AA	other	9e-05	0.99991	other
CL2001032209AA	other	8e-05	0.99992	other
CL2001032210AA	other	0.00524	0.99476	other
CL2001032211AA (testset)	other	0.00086	0.99914	other
CL2001032212AA	other	0.03538	0.96462	other
CL2001032213AA	other	0.01766	0.98234	other
CL2001032214AA (testset)	other	0.01686	0.98314	other
CL2001032217AA (testset)	other	0.00248	0.99752	other
CL2001032218AA	other	0.00013	0.99987	other
CL2001032219AA (testset)	other	0.02204	0.97796	other
CL2001032220AA	NORMAL	0.92919	0.07081	NORMAL
CL2001032222AA (testset)	other	6e-05	0.99994	other
CL2001032229AA (testset)	other	0.00149	0.99851	other
CL2001032231AA	other	0.00477	0.99523	other
CL2001032232AA	other	0.00112	0.99888	other
CL2001032233AA (testset)	other	0.00047	0.99953	other
CL2001032238AA	other	0.00518	0.99482	other
CL2001032239AA	other	0.02009	0.97991	other
CL2001032240AA	other	0.00314	0.99686	other
CL2001032241AA (testset)	other	9e-04	0.9991	other
CL2001032242AA	other	0.00164	0.99836	other
CL2001032243AA	other	0.01866	0.98134	other
CL2001032248AA	other	0.00116	0.99884	other
CL2001032249AA (testset)	other	0.01749	0.98251	other
CL2001032252AA (testset)	other	0.00513	0.99487	other
CL2001032254AA (testset)	other	0.00043	0.99957	other
CL2001032255AA	other	0.00088	0.99912	other
CL2001032256AA (testset)	NORMAL	0.0111	0.9889	other
CL2001032259AA (testset)	other	0.00963	0.99037	other
CL2001032260AA	other	0.00366	0.99634	other
CL2001032301AA	other	0.00639	0.99361	other
CL2001032304AA	NORMAL	0.11421	0.88579	other
CL2001032305AA (testset)	other	0.00305	0.99695	other
CL2001032306AA (testset)	other	0.00267	0.99733	other
CL2001032307AA (testset)	other	0.81381	0.18619	NORMAL
CL2001032308AA	other	0.00012	0.99988	other
CL2001032309AA	other	0.00394	0.99606	other
CL2001032310AA	other	0.00242	0.99758	other
CL2001032311AA (testset)	other	0.00848	0.99152	other
CL2001032312AA	other	0.00026	0.99974	other
CL2001032313AA (testset)	other	0.0022	0.9978	other
CL2001032314AA (testset)	other	1e-04	0.9999	other
CL2001032316AA	other	0.00083	0.99917	other
CL2001032601AA	other	0.00028	0.99972	other
CL2001032602AA	other	0.02635	0.97365	other
CL2001032604AA	other	0.00519	0.99481	other
CL2001032607AA	other	0.00299	0.99701	other
CL2001032608AA	other	0.00425	0.99575	other
CL2001032610AA	other	0.00331	0.99669	other
CL2001032612AA	other	0.002	0.998	other
CL2001032613AA (testset)	other	0.00555	0.99445	other
CL2001032614AA	other	8e-04	0.9992	other
CL2001032616AA	other	0.00354	0.99646	other
CL2001032617AA (testset)	other	0.00129	0.99871	other
CL2001032620AA (testset)	other	0.00406	0.99594	other
CL2001032625AA	other	0.00168	0.99832	other
CL2001032627AA	other	0.00055	0.99945	other
CL2001032628AA	other	0.00144	0.99856	other
CL2001032629AA	other	0.00831	0.99169	other
CL2001032630AA (testset)	other	0.00191	0.99809	other
CL2001032632AA	other	0.00579	0.99421	other
CL2001032638AA	other	0.03687	0.96313	other
CL2001032640AA (testset)	other	0.005	0.995	other
CL2001032643AA	other	0.01757	0.98243	other
CL2001032644AA (testset)	other	0.00148	0.99852	other
CL2001032647AA	other	0.00334	0.99666	other
CL2001032701AA	other	0.00447	0.99553	other
CL2001032702AA	other	0.00462	0.99538	other
CL2001032703AA	other	0.00154	0.99846	other
CL2001032704AA	other	0.02233	0.97767	other
CL2001032706AA (testset)	other	0.00309	0.99691	other
CL2001032709AA	other	0.00782	0.99218	other
CL2001032716AA	other	0.03178	0.96822	other
CL2001032717AA	other	0.00115	0.99885	other
CL2001032718AA (testset)	NORMAL	0.73561	0.26439	NORMAL
CL2001032719AA	other	0.00492	0.99508	other
CL2001032720AA	other	0.00903	0.99097	other
CL2001032722AA	other	0.00697	0.99303	other
CL2001032724AA	NORMAL	0.20272	0.79728	other
CL2001032725AA	NORMAL	0.88437	0.11563	NORMAL
CL2001032727AA	NORMAL	0.56689	0.43311	NORMAL
CL2001032729AA	other	0.00047	0.99953	other
CL2001032730AA (testset)	other	0.00267	0.99733	other
CL2001032732AA (testset)	other	0.00271	0.99729	other
CL2001032733AA	other	0.00132	0.99868	other
CL2001032738AA (testset)	other	0.00085	0.99915	other
CL2001032742AA (testset)	other	0.00419	0.99581	other
CL2001032746AA	other	0.00085	0.99915	other
CL2001032747AA	other	0.03297	0.96703	other
CL2001032833AA	other	0.00029	0.99971	other
CL2001032836AA (testset)	other	0.00068	0.99932	other
CL2001032838AA (testset)	other	0.00317	0.99683	other
CL2001032839AA	other	0.00088	0.99912	other
CL2001032841AA	other	2e-04	0.9998	other
CL2001032842AA	other	0.00037	0.99963	other
CL2001032843AA (testset)	other	0.00235	0.99765	other
CL2001032845AA (testset)	other	0.00219	0.99781	other
CL2001032846AA	other	0.06981	0.93019	other
CL2001032847AA	other	0.02652	0.97348	other
CL2001032848AA	other	0.9406	0.0594	NORMAL
CL2001032850AA	other	0.00466	0.99534	other
CL2001032853AA	other	0.02541	0.97459	other
CL2001032854AA (testset)	other	0.00719	0.99281	other
CL2001032856AA	other	0.00152	0.99848	other
CL2001032857AA	other	0.00374	0.99626	other
CL2001032860AA (testset)	other	0.00664	0.99336	other
CL2001040305AA	other	0.00018	0.99982	other
CL2001040306AA	other	0.155	0.845	other
CL2001041708AA	other	0.00259	0.99741	other
CL2001041711AA	other	0.19152	0.80848	other
CL2001041716AA	other	0.20083	0.79917	other
CL2001042501AA (testset)	other	0.00216	0.99784	other
CL2001042505AA	other	0.00208	0.99792	other
CL2001042506AA (testset)	other	0.00197	0.99803	other