GO:0007417

GO:0007417

central nervous system development (annotated genes)

Biological Process

Parent node

GO:0007417	central nervous system development

This leaf node contains 48 genes

The following 48 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
38748_at	ADARB1	adenosine deaminase, RNA-specific, B1 (RED1 homolog rat)	1.7845	-0.1583
35079_at	CNTN6	contactin 6	0.7526	-0.0668
35697_at	PTS	6-pyruvoyltetrahydropterin synthase	-0.599	0.0531
37576_at	PCP4	Purkinje cell protein 4	-0.5145	0.0456
36363_at	UGT8	UDP glycosyltransferase 8 (UDP-galactose ceramide galactosyltransferase)	-0.4733	0.042
31355_at	ASCL2	achaete-scute complex-like 2 (Drosophila)	-0.3647	0.0323
37580_at	SH3GL3	SH3-domain GRB2-like 3	0.3587	-0.0318
33357_at	NCKAP1	NCK-associated protein 1	-0.355	0.0315
32115_r_at	ADORA2A	adenosine A2a receptor	-0.3297	0.0292
38957_at	DCAMKL1	doublecortin and CaM kinase-like 1	-0.2896	0.0257
37291_r_at	SNCA	synuclein, alpha (non A4 component of amyloid precursor)	-0.2823	0.025
37259_at	SERPINI1	serine (or cysteine) proteinase inhibitor, clade I (neuroserpin), member 1	-0.2747	0.0244
235_at	S100B	S100 calcium binding protein, beta (neural)	-0.2717	0.0241
33229_at	RPS6KA3	ribosomal protein S6 kinase, 90kDa, polypeptide 3	0.264	-0.0234
33086_at	PROP1	prophet of Pit1, paired-like homeodomain transcription factor	-0.2559	0.0227
32114_s_at	ADORA2A	adenosine A2a receptor	0.2412	-0.0214
1364_at	PTPRZ1	protein tyrosine phosphatase, receptor-type, Z polypeptide 1	-0.2314	0.0205
40350_at	ADAM23	a disintegrin and metalloproteinase domain 23	-0.2239	0.0199
1853_at	WNT1	wingless-type MMTV integration site family, member 1	-0.2219	0.0197
37287_at	NRCAM	neuronal cell adhesion molecule	-0.2216	0.0197
865_at	RPS6KA3	ribosomal protein S6 kinase, 90kDa, polypeptide 3	-0.2112	0.0187
37554_at	KLK6	kallikrein 6 (neurosin, zyme)	-0.1976	0.0175
34782_at	JARID2	Jumonji, AT rich interactive domain 2	0.1965	-0.0174
32950_at	POU6F2	POU domain, class 6, transcription factor 2	-0.1935	0.0172
35817_at	MBP	myelin basic protein	0.1911	-0.017
784_g_at	WWP1	WW domain-containing protein 1	0.1714	-0.0152
32951_g_at	POU6F2	POU domain, class 6, transcription factor 2	-0.1713	0.0152
32076_at	DSCR1L1	Down syndrome critical region gene 1-like 1	0.1573	-0.0139
37286_at	NRCAM	neuronal cell adhesion molecule	-0.1379	0.0122
40378_at	SH3GL2	SH3-domain GRB2-like 2	-0.1081	0.0096
31658_at	NEUROG3	neurogenin 3	-0.1071	0.0095
33019_at	PARK2	Parkinson disease (autosomal recessive, juvenile) 2, parkin	0.1031	-0.0091
34652_at	NPAS1	neuronal PAS domain protein 1	-0.0937	0.0083
31915_at	DRP2	dystrophin related protein 2	-0.0928	0.0082
37868_s_at	MOG	myelin oligodendrocyte glycoprotein	0.0924	-0.0082
35352_at	ARNT2	aryl-hydrocarbon receptor nuclear translocator 2	0.0883	-0.0078
783_at	WWP1	WW domain-containing protein 1	0.0659	-0.0058
36281_at	NHLH1	nescient helix loop helix 1	-0.0634	0.0056
32952_at	POU6F2	POU domain, class 6, transcription factor 2	0.0551	-0.0049
40902_at	WWP1	WW domain-containing protein 1	-0.0546	0.0048
40489_at	DRPLA	dentatorubral-pallidoluysian atrophy (atrophin-1)	-0.0503	0.0045
37867_at	MOG	myelin oligodendrocyte glycoprotein	0.0441	-0.0039
39159_at	SH3GL1	SH3-domain GRB2-like 1	0.0403	-0.0036
36326_at	NHLH2	nescient helix loop helix 2	0.0401	-0.0036
40317_at	ACCN1	amiloride-sensitive cation channel 1, neuronal (degenerin)	-0.0377	0.0033
37288_g_at	NRCAM	neuronal cell adhesion molecule	-0.0313	0.0028
33005_at	AD7C-NTP	neuronal thread protein	-0.0261	0.0023
41578_at	NHLH2	nescient helix loop helix 2	0.0207	-0.0018

Performance on training data

• Error rate: 0.02222
• Performance: 0.11519
• Redundancy: 3.77602

	Sensitivity	Specificity
NORMAL	0.81818	0.99194
other	0.99194	0.81818

Performance on test data

• Error rate: 0.04412
• Performance: 0.26839
• Redundancy: 3.77207

	Sensitivity	Specificity
NORMAL	0.5	1
other	1	0.5

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00054	0.99946	other
CL2001031607AA	other	0.00067	0.99933	other
CL2001031608AA	other	0.03698	0.96302	other
CL2001031609AA	other	0.00034	0.99966	other
CL2001031611AA	other	0.00148	0.99852	other
CL2001031612AA	other	0.00093	0.99907	other
CL2001031613AA	other	0.03716	0.96284	other
CL2001031615AA	other	0.00128	0.99872	other
CL2001031616AA (testset)	other	0.00529	0.99471	other
CL2001031618AA	other	0.00394	0.99606	other
CL2001031620AA (testset)	other	0.00143	0.99857	other
CL2001031621AA (testset)	other	6e-05	0.99994	other
CL2001031622AA	other	0.00129	0.99871	other
CL2001031625AA	other	0.02717	0.97283	other
CL2001031627AA (testset)	other	0.00945	0.99055	other
CL2001031628AA (testset)	other	0.00707	0.99293	other
CL2001031629AA	other	0.00062	0.99938	other
CL2001031630AA (testset)	other	0.00192	0.99808	other
CL2001031631AA	other	0.00024	0.99976	other
CL2001031632AA	other	0.00143	0.99857	other
CL2001031634AA	other	0.00098	0.99902	other
CL2001031635AA	other	0.00391	0.99609	other
CL2001031636AA	other	0.00041	0.99959	other
CL2001032002AA	other	0.00219	0.99781	other
CL2001032005AA	other	0.00011	0.99989	other
CL2001032008AA	other	0.00024	0.99976	other
CL2001032009AA (testset)	other	0.00013	0.99987	other
CL2001032010AA (testset)	NORMAL	0.15572	0.84428	other
CL2001032011AA (testset)	other	0.00431	0.99569	other
CL2001032012AA (testset)	other	0.02858	0.97142	other
CL2001032013AA (testset)	other	0.28877	0.71123	other
CL2001032015AA	other	0.57392	0.42608	NORMAL
CL2001032016AA (testset)	other	0.0117	0.9883	other
CL2001032019AA	other	0.00113	0.99887	other
CL2001032020AA (testset)	other	0.00221	0.99779	other
CL2001032025AA	other	0.00665	0.99335	other
CL2001032026AA	other	0.00658	0.99342	other
CL2001032027AA	other	0.00535	0.99465	other
CL2001032030AA	other	0.00118	0.99882	other
CL2001032031AA (testset)	other	0.00491	0.99509	other
CL2001032032AA	other	0.01856	0.98144	other
CL2001032034AA	other	0.49781	0.50219	other
CL2001032036AA	other	0.00587	0.99413	other
CL2001032041AA	NORMAL	0.71741	0.28259	NORMAL
CL2001032043AA	NORMAL	0.94334	0.05666	NORMAL
CL2001032044AA	other	3e-05	0.99997	other
CL2001032045AA (testset)	NORMAL	0.29742	0.70258	other
CL2001032046AA	NORMAL	0.68216	0.31784	NORMAL
CL2001032101AA	other	0.00198	0.99802	other
CL2001032102AA	NORMAL	0.66361	0.33639	NORMAL
CL2001032103AA	other	0.04601	0.95399	other
CL2001032104AA	other	0.00329	0.99671	other
CL2001032105AA	other	0.00024	0.99976	other
CL2001032107AA	other	0.00095	0.99905	other
CL2001032108AA	other	0.00671	0.99329	other
CL2001032109AA (testset)	other	0.01088	0.98912	other
CL2001032110AA	other	0.00326	0.99674	other
CL2001032111AA	other	0.00207	0.99793	other
CL2001032113AA (testset)	other	0.00065	0.99935	other
CL2001032114AA	other	0.02153	0.97847	other
CL2001032115AA (testset)	other	0.0025	0.9975	other
CL2001032116AA (testset)	other	0.01349	0.98651	other
CL2001032117AA	other	0.01034	0.98966	other
CL2001032121AA	other	0.00249	0.99751	other
CL2001032122AA	other	0.00035	0.99965	other
CL2001032124AA	other	0.00014	0.99986	other
CL2001032125AA	other	0.01581	0.98419	other
CL2001032127AA (testset)	other	0.00133	0.99867	other
CL2001032128AA (testset)	NORMAL	0.97326	0.02674	NORMAL
CL2001032129AA (testset)	other	0.00031	0.99969	other
CL2001032130AA	other	0.00019	0.99981	other
CL2001032132AA	other	0.00578	0.99422	other
CL2001032134AA (testset)	other	0.00987	0.99013	other
CL2001032135AA	other	0.0133	0.9867	other
CL2001032136AA (testset)	other	0.00461	0.99539	other
CL2001032138AA (testset)	other	0.00263	0.99737	other
CL2001032141AA (testset)	other	0.00229	0.99771	other
CL2001032142AA	other	0.00096	0.99904	other
CL2001032144AA	other	0.00072	0.99928	other
CL2001032145AA	other	0.00706	0.99294	other
CL2001032147AA	NORMAL	0.94724	0.05276	NORMAL
CL2001032149AA (testset)	other	0.01709	0.98291	other
CL2001032151AA	other	0.02261	0.97739	other
CL2001032152AA	other	0.00229	0.99771	other
CL2001032153AA	other	0.00023	0.99977	other
CL2001032155AA	other	0.02123	0.97877	other
CL2001032156AA (testset)	other	0.01717	0.98283	other
CL2001032202AA (testset)	NORMAL	0.95045	0.04955	NORMAL
CL2001032206AA	NORMAL	0.8115	0.1885	NORMAL
CL2001032207AA	other	8e-04	0.9992	other
CL2001032209AA	other	5e-05	0.99995	other
CL2001032210AA	other	0.00011	0.99989	other
CL2001032211AA (testset)	other	0.00186	0.99814	other
CL2001032212AA	other	0.00449	0.99551	other
CL2001032213AA	other	0.19442	0.80558	other
CL2001032214AA (testset)	other	0.43813	0.56187	other
CL2001032217AA (testset)	other	3e-04	0.9997	other
CL2001032218AA	other	0.00082	0.99918	other
CL2001032219AA (testset)	other	0.00228	0.99772	other
CL2001032220AA	NORMAL	0.94341	0.05659	NORMAL
CL2001032222AA (testset)	other	0.00184	0.99816	other
CL2001032229AA (testset)	other	0.00213	0.99787	other
CL2001032231AA	other	0.00188	0.99812	other
CL2001032232AA	other	0.0049	0.9951	other
CL2001032233AA (testset)	other	0.00206	0.99794	other
CL2001032238AA	other	0.00273	0.99727	other
CL2001032239AA	other	0.00057	0.99943	other
CL2001032240AA	other	0.00767	0.99233	other
CL2001032241AA (testset)	other	0.00216	0.99784	other
CL2001032242AA	other	0.00276	0.99724	other
CL2001032243AA	other	0.00315	0.99685	other
CL2001032248AA	other	0.00073	0.99927	other
CL2001032249AA (testset)	other	0.00208	0.99792	other
CL2001032252AA (testset)	other	0.00331	0.99669	other
CL2001032254AA (testset)	other	0.00123	0.99877	other
CL2001032255AA	other	0.00623	0.99377	other
CL2001032256AA (testset)	NORMAL	0.0046	0.9954	other
CL2001032259AA (testset)	other	0.01608	0.98392	other
CL2001032260AA	other	0.00286	0.99714	other
CL2001032301AA	other	0.00191	0.99809	other
CL2001032304AA	NORMAL	0.32274	0.67726	other
CL2001032305AA (testset)	other	0.00584	0.99416	other
CL2001032306AA (testset)	other	0.00084	0.99916	other
CL2001032307AA (testset)	other	0.04029	0.95971	other
CL2001032308AA	other	0.00268	0.99732	other
CL2001032309AA	other	0.00953	0.99047	other
CL2001032310AA	other	0.00113	0.99887	other
CL2001032311AA (testset)	other	0.00068	0.99932	other
CL2001032312AA	other	0.00524	0.99476	other
CL2001032313AA (testset)	other	0.00494	0.99506	other
CL2001032314AA (testset)	other	0.00648	0.99352	other
CL2001032316AA	other	0.00368	0.99632	other
CL2001032601AA	other	0.00143	0.99857	other
CL2001032602AA	other	0.00143	0.99857	other
CL2001032604AA	other	0.00231	0.99769	other
CL2001032607AA	other	0.00063	0.99937	other
CL2001032608AA	other	0.00017	0.99983	other
CL2001032610AA	other	0.00241	0.99759	other
CL2001032612AA	other	0.0092	0.9908	other
CL2001032613AA (testset)	other	0.00123	0.99877	other
CL2001032614AA	other	0.01142	0.98858	other
CL2001032616AA	other	0.01682	0.98318	other
CL2001032617AA (testset)	other	0.00117	0.99883	other
CL2001032620AA (testset)	other	0.00258	0.99742	other
CL2001032625AA	other	0.00067	0.99933	other
CL2001032627AA	other	0.00042	0.99958	other
CL2001032628AA	other	0.00485	0.99515	other
CL2001032629AA	other	0.00069	0.99931	other
CL2001032630AA (testset)	other	0.00024	0.99976	other
CL2001032632AA	other	0.00035	0.99965	other
CL2001032638AA	other	0.00412	0.99588	other
CL2001032640AA (testset)	other	0.00179	0.99821	other
CL2001032643AA	other	0.04762	0.95238	other
CL2001032644AA (testset)	other	0.00015	0.99985	other
CL2001032647AA	other	0.02637	0.97363	other
CL2001032701AA	other	0.0028	0.9972	other
CL2001032702AA	other	0.00273	0.99727	other
CL2001032703AA	other	5e-04	0.9995	other
CL2001032704AA	other	0.00454	0.99546	other
CL2001032706AA (testset)	other	0.00055	0.99945	other
CL2001032709AA	other	0.00148	0.99852	other
CL2001032716AA	other	0.00387	0.99613	other
CL2001032717AA	other	0.00144	0.99856	other
CL2001032718AA (testset)	NORMAL	0.97447	0.02553	NORMAL
CL2001032719AA	other	0.00786	0.99214	other
CL2001032720AA	other	6e-05	0.99994	other
CL2001032722AA	other	1e-04	0.9999	other
CL2001032724AA	NORMAL	0.25163	0.74837	other
CL2001032725AA	NORMAL	0.91332	0.08668	NORMAL
CL2001032727AA	NORMAL	0.70379	0.29621	NORMAL
CL2001032729AA	other	0.00516	0.99484	other
CL2001032730AA (testset)	other	0.00336	0.99664	other
CL2001032732AA (testset)	other	0.00036	0.99964	other
CL2001032733AA	other	0.00518	0.99482	other
CL2001032738AA (testset)	other	0.00413	0.99587	other
CL2001032742AA (testset)	other	0.00017	0.99983	other
CL2001032746AA	other	0.00487	0.99513	other
CL2001032747AA	other	0.00064	0.99936	other
CL2001032833AA	other	0.00194	0.99806	other
CL2001032836AA (testset)	other	7e-04	0.9993	other
CL2001032838AA (testset)	other	0.00154	0.99846	other
CL2001032839AA	other	2e-04	0.9998	other
CL2001032841AA	other	0.00534	0.99466	other
CL2001032842AA	other	0.00135	0.99865	other
CL2001032843AA (testset)	other	0.00016	0.99984	other
CL2001032845AA (testset)	other	0.01553	0.98447	other
CL2001032846AA	other	0.00068	0.99932	other
CL2001032847AA	other	0.00042	0.99958	other
CL2001032848AA	other	0.4873	0.5127	other
CL2001032850AA	other	0.00047	0.99953	other
CL2001032853AA	other	0.00072	0.99928	other
CL2001032854AA (testset)	other	0.00033	0.99967	other
CL2001032856AA	other	0.01951	0.98049	other
CL2001032857AA	other	0.00391	0.99609	other
CL2001032860AA (testset)	other	8e-05	0.99992	other
CL2001040305AA	other	0.00016	0.99984	other
CL2001040306AA	other	6e-04	0.9994	other
CL2001041708AA	other	0.00071	0.99929	other
CL2001041711AA	other	0.00187	0.99813	other
CL2001041716AA	other	0.22491	0.77509	other
CL2001042501AA (testset)	other	0.00028	0.99972	other
CL2001042505AA	other	2e-05	0.99998	other
CL2001042506AA (testset)	other	0.00534	0.99466	other