GO:0007283

GO:0007283

spermatogenesis (annotated genes)

Biological Process

Parent node

GO:0007283	spermatogenesis

This leaf node contains 67 genes

The following 51 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
36443_at	DNAH9	dynein, axonemal, heavy polypeptide 9	0.6825	-0.0605
36209_at	BRD2	bromodomain containing 2	0.6587	-0.0584
40412_at	PTTG1	pituitary tumor-transforming 1	-0.573	0.0508
40176_at	RFP	ret finger protein	-0.5116	0.0454
35614_at	TCFL5	transcription factor-like 5 (basic helix-loop-helix)	-0.4731	0.042
36210_g_at	BRD2	bromodomain containing 2	0.4087	-0.0363
39419_at	SPAG9	sperm associated antigen 9	0.3909	-0.0347
32111_at	CDYL	chromodomain protein, Y-like	-0.3731	0.0331
36211_at	BCL2L2	BCL2-like 2	0.3706	-0.0329
1836_at	CCNI	cyclin I	0.3678	-0.0326
35479_at	ADAM28	a disintegrin and metalloproteinase domain 28	-0.3613	0.0321
1843_at	RFP	ret finger protein	-0.2879	0.0255
41482_at	GFER	growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae)	-0.2825	0.0251
32987_at	FSHPRH1	FSH primary response (LRPR1 homolog, rat) 1	-0.2504	0.0222
39639_s_at	TNP1	transition protein 1 (during histone to protamine replacement)	0.194	-0.0172
40124_at	RUVBL1	RuvB-like 1 (E. coli)	-0.193	0.0171
33255_at	NASP	nuclear autoantigenic sperm protein (histone-binding)	-0.1913	0.017
1853_at	WNT1	wingless-type MMTV integration site family, member 1	-0.1829	0.0162
34047_at	OVOL1	ovo-like 1(Drosophila)	-0.1825	0.0162
37583_at	JARID1D	Jumonji, AT rich interactive domain 1D (RBP2-like)	0.1809	-0.016
32005_at	PMCH	pro-melanin-concentrating hormone	0.1806	-0.016
32137_at	JAG2	jagged 2	-0.1645	0.0146
35106_at	CCIN	calicin	0.1611	-0.0143
35901_at	PIWIL1	piwi-like 1 (Drosophila)	-0.1545	0.0137
34567_at	CYLC2	cylicin, basic protein of sperm head cytoskeleton 2	0.1506	-0.0134
35929_s_at	TSPY	testis specific protein, Y-linked	-0.148	0.0131
33972_r_at	DAZL	deleted in azoospermia-like	0.1335	-0.0118
35930_at	TSPY	testis specific protein, Y-linked	-0.1252	0.0111
701_s_at	INSL3	insulin-like 3 (Leydig cell)	-0.123	0.0109
32014_at	ADAM18	a disintegrin and metalloproteinase domain 18	0.1184	-0.0105
561_at	FSHR	follicle stimulating hormone receptor	0.1158	-0.0103
41030_at	FOXJ1	forkhead box J1	0.1078	-0.0096
34044_at	HSF2BP	heat shock transcription factor 2 binding protein	-0.1006	0.0089
33164_at	TESK2	testis-specific kinase 2	0.1004	-0.0089
562_g_at	FSHR	follicle stimulating hormone receptor	0.0964	-0.0086
35885_at	USP9Y	ubiquitin specific protease 9, Y-linked (fat facets-like, Drosophila)	0.096	-0.0085
36208_at	BRD2	bromodomain containing 2	0.0946	-0.0084
35568_at	ADCYAP1R1	adenylate cyclase activating polypeptide 1 (pituitary) receptor type I	0.0869	-0.0077
37553_at	TESK1	testis-specific kinase 1	0.0828	-0.0073
41099_at	LIG3	ligase III, DNA, ATP-dependent	-0.0827	0.0073
37663_at	DDX1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	-0.0761	0.0067
1187_at	LIG3	ligase III, DNA, ATP-dependent	-0.0748	0.0066
40342_at	DAZ	deleted in azoospermia	-0.0585	0.0052
36301_at	INSL3	insulin-like 3 (Leydig cell)	-0.0501	0.0044
293_at	INSL3	insulin-like 3 (Leydig cell)	-0.047	0.0042
40494_at	DEDD	death effector domain containing	0.0371	-0.0033
33478_at	TNP2	transition protein 2 (during histone to protamine replacement)	-0.0338	0.003
36375_at	ODF1	outer dense fiber of sperm tails 1	0.0269	-0.0024
1914_at	CCNA1	cyclin A1	-0.026	0.0023
34630_s_at	DNAH9	dynein, axonemal, heavy polypeptide 9	0.0178	-0.0016
1188_g_at	LIG3	ligase III, DNA, ATP-dependent	-0.0141	0.0013

Performance on training data

• Error rate: 0.02963
• Performance: 0.17414
• Redundancy: 3.23377

	Sensitivity	Specificity
NORMAL	0.63636	1
other	1	0.63636

Performance on test data

• Error rate: 0.04412
• Performance: 0.32022
• Redundancy: 3.23395

	Sensitivity	Specificity
NORMAL	0.5	1
other	1	0.5

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00162	0.99838	other
CL2001031607AA	other	0.0058	0.9942	other
CL2001031608AA	other	0.01689	0.98311	other
CL2001031609AA	other	0.05737	0.94263	other
CL2001031611AA	other	0.01441	0.98559	other
CL2001031612AA	other	0.01539	0.98461	other
CL2001031613AA	other	0.07048	0.92952	other
CL2001031615AA	other	0.01226	0.98774	other
CL2001031616AA (testset)	other	0.00481	0.99519	other
CL2001031618AA	other	0.0033	0.9967	other
CL2001031620AA (testset)	other	0.01819	0.98181	other
CL2001031621AA (testset)	other	0.0045	0.9955	other
CL2001031622AA	other	0.00762	0.99238	other
CL2001031625AA	other	0.01116	0.98884	other
CL2001031627AA (testset)	other	0.02423	0.97577	other
CL2001031628AA (testset)	other	0.00163	0.99837	other
CL2001031629AA	other	0.00167	0.99833	other
CL2001031630AA (testset)	other	0.00214	0.99786	other
CL2001031631AA	other	0.00088	0.99912	other
CL2001031632AA	other	0.00242	0.99758	other
CL2001031634AA	other	0.00451	0.99549	other
CL2001031635AA	other	0.00099	0.99901	other
CL2001031636AA	other	0.00184	0.99816	other
CL2001032002AA	other	0.01043	0.98957	other
CL2001032005AA	other	0.00079	0.99921	other
CL2001032008AA	other	0.00058	0.99942	other
CL2001032009AA (testset)	other	0.01176	0.98824	other
CL2001032010AA (testset)	NORMAL	0.04966	0.95034	other
CL2001032011AA (testset)	other	0.00998	0.99002	other
CL2001032012AA (testset)	other	0.01564	0.98436	other
CL2001032013AA (testset)	other	0.03339	0.96661	other
CL2001032015AA	other	0.02281	0.97719	other
CL2001032016AA (testset)	other	0.00061	0.99939	other
CL2001032019AA	other	0.00373	0.99627	other
CL2001032020AA (testset)	other	0.01013	0.98987	other
CL2001032025AA	other	0.02943	0.97057	other
CL2001032026AA	other	0.00636	0.99364	other
CL2001032027AA	other	0.06441	0.93559	other
CL2001032030AA	other	0.00755	0.99245	other
CL2001032031AA (testset)	other	0.03818	0.96182	other
CL2001032032AA	other	0.05256	0.94744	other
CL2001032034AA	other	0.27554	0.72446	other
CL2001032036AA	other	0.01154	0.98846	other
CL2001032041AA	NORMAL	0.51021	0.48979	NORMAL
CL2001032043AA	NORMAL	0.8856	0.1144	NORMAL
CL2001032044AA	other	0.05089	0.94911	other
CL2001032045AA (testset)	NORMAL	0.40433	0.59567	other
CL2001032046AA	NORMAL	0.67821	0.32179	NORMAL
CL2001032101AA	other	0.05114	0.94886	other
CL2001032102AA	NORMAL	0.58505	0.41495	NORMAL
CL2001032103AA	other	0.00455	0.99545	other
CL2001032104AA	other	0.00092	0.99908	other
CL2001032105AA	other	0.00012	0.99988	other
CL2001032107AA	other	0.00117	0.99883	other
CL2001032108AA	other	0.00439	0.99561	other
CL2001032109AA (testset)	other	0.09502	0.90498	other
CL2001032110AA	other	0.02419	0.97581	other
CL2001032111AA	other	0.00453	0.99547	other
CL2001032113AA (testset)	other	0.00259	0.99741	other
CL2001032114AA	other	0.03105	0.96895	other
CL2001032115AA (testset)	other	0.09977	0.90023	other
CL2001032116AA (testset)	other	0.03109	0.96891	other
CL2001032117AA	other	0.00517	0.99483	other
CL2001032121AA	other	0.00344	0.99656	other
CL2001032122AA	other	0.00853	0.99147	other
CL2001032124AA	other	0.05551	0.94449	other
CL2001032125AA	other	0.00038	0.99962	other
CL2001032127AA (testset)	other	0.46835	0.53165	other
CL2001032128AA (testset)	NORMAL	0.75338	0.24662	NORMAL
CL2001032129AA (testset)	other	0.13366	0.86634	other
CL2001032130AA	other	8e-04	0.9992	other
CL2001032132AA	other	0.08722	0.91278	other
CL2001032134AA (testset)	other	0.03223	0.96777	other
CL2001032135AA	other	0.27088	0.72912	other
CL2001032136AA (testset)	other	0.01668	0.98332	other
CL2001032138AA (testset)	other	0.01458	0.98542	other
CL2001032141AA (testset)	other	0.03381	0.96619	other
CL2001032142AA	other	0.02737	0.97263	other
CL2001032144AA	other	0.00152	0.99848	other
CL2001032145AA	other	0.17134	0.82866	other
CL2001032147AA	NORMAL	0.86583	0.13417	NORMAL
CL2001032149AA (testset)	other	0.00854	0.99146	other
CL2001032151AA	other	0.0606	0.9394	other
CL2001032152AA	other	0.06033	0.93967	other
CL2001032153AA	other	0.1117	0.8883	other
CL2001032155AA	other	0.03441	0.96559	other
CL2001032156AA (testset)	other	0.01932	0.98068	other
CL2001032202AA (testset)	NORMAL	0.76859	0.23141	NORMAL
CL2001032206AA	NORMAL	0.4723	0.5277	other
CL2001032207AA	other	0.0064	0.9936	other
CL2001032209AA	other	0.01243	0.98757	other
CL2001032210AA	other	0.21697	0.78303	other
CL2001032211AA (testset)	other	0.01267	0.98733	other
CL2001032212AA	other	0.02518	0.97482	other
CL2001032213AA	other	0.07737	0.92263	other
CL2001032214AA (testset)	other	0.0235	0.9765	other
CL2001032217AA (testset)	other	0.00392	0.99608	other
CL2001032218AA	other	0.00467	0.99533	other
CL2001032219AA (testset)	other	0.06204	0.93796	other
CL2001032220AA	NORMAL	0.81027	0.18973	NORMAL
CL2001032222AA (testset)	other	0.01042	0.98958	other
CL2001032229AA (testset)	other	0.00685	0.99315	other
CL2001032231AA	other	0.02799	0.97201	other
CL2001032232AA	other	0.05908	0.94092	other
CL2001032233AA (testset)	other	0.00124	0.99876	other
CL2001032238AA	other	0.08906	0.91094	other
CL2001032239AA	other	0.01045	0.98955	other
CL2001032240AA	other	0.02575	0.97425	other
CL2001032241AA (testset)	other	0.00703	0.99297	other
CL2001032242AA	other	0.03762	0.96238	other
CL2001032243AA	other	0.02062	0.97938	other
CL2001032248AA	other	0.00245	0.99755	other
CL2001032249AA (testset)	other	0.02842	0.97158	other
CL2001032252AA (testset)	other	0.00159	0.99841	other
CL2001032254AA (testset)	other	0.04917	0.95083	other
CL2001032255AA	other	0.00135	0.99865	other
CL2001032256AA (testset)	NORMAL	0.00621	0.99379	other
CL2001032259AA (testset)	other	0.00074	0.99926	other
CL2001032260AA	other	0.0055	0.9945	other
CL2001032301AA	other	0.02103	0.97897	other
CL2001032304AA	NORMAL	0.31774	0.68226	other
CL2001032305AA (testset)	other	0.01266	0.98734	other
CL2001032306AA (testset)	other	0.0035	0.9965	other
CL2001032307AA (testset)	other	0.07397	0.92603	other
CL2001032308AA	other	0.00934	0.99066	other
CL2001032309AA	other	0.0331	0.9669	other
CL2001032310AA	other	0.00515	0.99485	other
CL2001032311AA (testset)	other	0.00344	0.99656	other
CL2001032312AA	other	0.00313	0.99687	other
CL2001032313AA (testset)	other	0.00634	0.99366	other
CL2001032314AA (testset)	other	0.00121	0.99879	other
CL2001032316AA	other	5e-04	0.9995	other
CL2001032601AA	other	0.00747	0.99253	other
CL2001032602AA	other	0.00345	0.99655	other
CL2001032604AA	other	0.11908	0.88092	other
CL2001032607AA	other	0.09081	0.90919	other
CL2001032608AA	other	0.00856	0.99144	other
CL2001032610AA	other	0.00318	0.99682	other
CL2001032612AA	other	0.0464	0.9536	other
CL2001032613AA (testset)	other	0.0085	0.9915	other
CL2001032614AA	other	0.00121	0.99879	other
CL2001032616AA	other	0.04123	0.95877	other
CL2001032617AA (testset)	other	0.03667	0.96333	other
CL2001032620AA (testset)	other	0.00688	0.99312	other
CL2001032625AA	other	0.00123	0.99877	other
CL2001032627AA	other	0.01865	0.98135	other
CL2001032628AA	other	0.00436	0.99564	other
CL2001032629AA	other	0.01006	0.98994	other
CL2001032630AA (testset)	other	0.0312	0.9688	other
CL2001032632AA	other	0.00419	0.99581	other
CL2001032638AA	other	0.00375	0.99625	other
CL2001032640AA (testset)	other	0.0102	0.9898	other
CL2001032643AA	other	0.00336	0.99664	other
CL2001032644AA (testset)	other	0.01363	0.98637	other
CL2001032647AA	other	0.05858	0.94142	other
CL2001032701AA	other	0.00371	0.99629	other
CL2001032702AA	other	0.00353	0.99647	other
CL2001032703AA	other	0.00819	0.99181	other
CL2001032704AA	other	0.00504	0.99496	other
CL2001032706AA (testset)	other	0.00992	0.99008	other
CL2001032709AA	other	0.04748	0.95252	other
CL2001032716AA	other	0.02323	0.97677	other
CL2001032717AA	other	0.00135	0.99865	other
CL2001032718AA (testset)	NORMAL	0.83123	0.16877	NORMAL
CL2001032719AA	other	0.02078	0.97922	other
CL2001032720AA	other	0.00256	0.99744	other
CL2001032722AA	other	0.31971	0.68029	other
CL2001032724AA	NORMAL	0.18616	0.81384	other
CL2001032725AA	NORMAL	0.45248	0.54752	other
CL2001032727AA	NORMAL	0.65779	0.34221	NORMAL
CL2001032729AA	other	0.004	0.996	other
CL2001032730AA (testset)	other	0.00793	0.99207	other
CL2001032732AA (testset)	other	0.03765	0.96235	other
CL2001032733AA	other	0.03213	0.96787	other
CL2001032738AA (testset)	other	0.00301	0.99699	other
CL2001032742AA (testset)	other	0.00328	0.99672	other
CL2001032746AA	other	0.03575	0.96425	other
CL2001032747AA	other	0.01305	0.98695	other
CL2001032833AA	other	0.01612	0.98388	other
CL2001032836AA (testset)	other	0.00041	0.99959	other
CL2001032838AA (testset)	other	0.01597	0.98403	other
CL2001032839AA	other	0.00578	0.99422	other
CL2001032841AA	other	0.00421	0.99579	other
CL2001032842AA	other	0.00801	0.99199	other
CL2001032843AA (testset)	other	0.00135	0.99865	other
CL2001032845AA (testset)	other	0.0036	0.9964	other
CL2001032846AA	other	0.03111	0.96889	other
CL2001032847AA	other	0.17559	0.82441	other
CL2001032848AA	other	0.41203	0.58797	other
CL2001032850AA	other	0.0922	0.9078	other
CL2001032853AA	other	0.04986	0.95014	other
CL2001032854AA (testset)	other	0.00763	0.99237	other
CL2001032856AA	other	0.015	0.985	other
CL2001032857AA	other	0.04213	0.95787	other
CL2001032860AA (testset)	other	0.02162	0.97838	other
CL2001040305AA	other	0.00057	0.99943	other
CL2001040306AA	other	0.01456	0.98544	other
CL2001041708AA	other	0.00042	0.99958	other
CL2001041711AA	other	0.00808	0.99192	other
CL2001041716AA	other	0.16424	0.83576	other
CL2001042501AA (testset)	other	0.0188	0.9812	other
CL2001042505AA	other	0.00128	0.99872	other
CL2001042506AA (testset)	other	0.02063	0.97937	other