GO:0007242

GO:0007242

intracellular signaling cascade (annotated genes)

Biological Process

Parent node

GO:0007242	intracellular signaling cascade

This leaf node contains 312 genes

The following 13 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
1780_at	FGR	Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.8017	-0.0711
35358_at	TENC1	tensin like C1 domain-containing phosphatase	0.4343	-0.0385
38363_at	TYROBP	TYRO protein tyrosine kinase binding protein	0.3915	-0.0347
38110_at	SDCBP	syndecan binding protein (syntenin)	0.2718	-0.0241
32625_at	NPR1	natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)	0.2696	-0.0239
40480_s_at	FYN	FYN oncogene related to SRC, FGR, YES	0.1548	-0.0137
1427_g_at	SLA	Src-like-adaptor	0.1536	-0.0136
36849_at	PARG1	PTPL1-associated RhoGAP 1	0.1397	-0.0124
33800_at	ADCY9	adenylate cyclase 9	0.1316	-0.0117
2039_s_at	FYN	FYN oncogene related to SRC, FGR, YES	0.1236	-0.011
38994_at	SOCS2	suppressor of cytokine signaling 2	0.1163	-0.0103
735_s_at	AKAP13	A kinase (PRKA) anchor protein 13	0.0926	-0.0082
38893_at	NCF4	neutrophil cytosolic factor 4, 40kDa	0.0831	-0.0074

Performance on training data

• Error rate: 0.02963
• Performance: 0.20928
• Redundancy: 2.85437

	Sensitivity	Specificity
NORMAL	1	0.96774
other	0.96774	1

Performance on test data

• Error rate: 0
• Performance: 0.17274
• Redundancy: 2.7092

	Sensitivity	Specificity
NORMAL	1	1
other	1	1

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00917	0.99083	other
CL2001031607AA	other	0.23749	0.76251	other
CL2001031608AA	other	0.56956	0.43044	NORMAL
CL2001031609AA	other	0.00488	0.99512	other
CL2001031611AA	other	0.05796	0.94204	other
CL2001031612AA	other	0.07933	0.92067	other
CL2001031613AA	other	0.68601	0.31399	NORMAL
CL2001031615AA	other	0.02024	0.97976	other
CL2001031616AA (testset)	other	0.07752	0.92248	other
CL2001031618AA	other	0.0265	0.9735	other
CL2001031620AA (testset)	other	0.02219	0.97781	other
CL2001031621AA (testset)	other	0.03263	0.96737	other
CL2001031622AA	other	0.01723	0.98277	other
CL2001031625AA	other	0.01964	0.98036	other
CL2001031627AA (testset)	other	0.05201	0.94799	other
CL2001031628AA (testset)	other	0.04894	0.95106	other
CL2001031629AA	other	0.01299	0.98701	other
CL2001031630AA (testset)	other	0.00738	0.99262	other
CL2001031631AA	other	0.01705	0.98295	other
CL2001031632AA	other	0.02876	0.97124	other
CL2001031634AA	other	0.05084	0.94916	other
CL2001031635AA	other	0.1785	0.8215	other
CL2001031636AA	other	0.03115	0.96885	other
CL2001032002AA	other	0.00818	0.99182	other
CL2001032005AA	other	0.01362	0.98638	other
CL2001032008AA	other	0.00992	0.99008	other
CL2001032009AA (testset)	other	0.01639	0.98361	other
CL2001032010AA (testset)	NORMAL	0.77477	0.22523	NORMAL
CL2001032011AA (testset)	other	0.16654	0.83346	other
CL2001032012AA (testset)	other	0.16343	0.83657	other
CL2001032013AA (testset)	other	0.17122	0.82878	other
CL2001032015AA	other	0.17709	0.82291	other
CL2001032016AA (testset)	other	0.02692	0.97308	other
CL2001032019AA	other	0.06244	0.93756	other
CL2001032020AA (testset)	other	0.1843	0.8157	other
CL2001032025AA	other	0.03417	0.96583	other
CL2001032026AA	other	0.02864	0.97136	other
CL2001032027AA	other	0.20028	0.79972	other
CL2001032030AA	other	0.03189	0.96811	other
CL2001032031AA (testset)	other	0.05741	0.94259	other
CL2001032032AA	other	0.05043	0.94957	other
CL2001032034AA	other	0.22974	0.77026	other
CL2001032036AA	other	0.03152	0.96848	other
CL2001032041AA	NORMAL	0.81512	0.18488	NORMAL
CL2001032043AA	NORMAL	0.82334	0.17666	NORMAL
CL2001032044AA	other	0.00811	0.99189	other
CL2001032045AA (testset)	NORMAL	0.82071	0.17929	NORMAL
CL2001032046AA	NORMAL	0.75991	0.24009	NORMAL
CL2001032101AA	other	0.0451	0.9549	other
CL2001032102AA	NORMAL	0.93613	0.06387	NORMAL
CL2001032103AA	other	0.10201	0.89799	other
CL2001032104AA	other	0.01968	0.98032	other
CL2001032105AA	other	0.00883	0.99117	other
CL2001032107AA	other	0.01911	0.98089	other
CL2001032108AA	other	0.05614	0.94386	other
CL2001032109AA (testset)	other	0.08498	0.91502	other
CL2001032110AA	other	0.12657	0.87343	other
CL2001032111AA	other	0.10504	0.89496	other
CL2001032113AA (testset)	other	0.00436	0.99564	other
CL2001032114AA	other	0.08384	0.91616	other
CL2001032115AA (testset)	other	0.01969	0.98031	other
CL2001032116AA (testset)	other	0.01741	0.98259	other
CL2001032117AA	other	0.01356	0.98644	other
CL2001032121AA	other	0.01334	0.98666	other
CL2001032122AA	other	0.01045	0.98955	other
CL2001032124AA	other	0.01284	0.98716	other
CL2001032125AA	other	0.00468	0.99532	other
CL2001032127AA (testset)	other	0.0059	0.9941	other
CL2001032128AA (testset)	NORMAL	0.75928	0.24072	NORMAL
CL2001032129AA (testset)	other	0.02729	0.97271	other
CL2001032130AA	other	0.05517	0.94483	other
CL2001032132AA	other	0.01565	0.98435	other
CL2001032134AA (testset)	other	0.09443	0.90557	other
CL2001032135AA	other	0.06666	0.93334	other
CL2001032136AA (testset)	other	0.06215	0.93785	other
CL2001032138AA (testset)	other	0.1886	0.8114	other
CL2001032141AA (testset)	other	0.01913	0.98087	other
CL2001032142AA	other	0.03854	0.96146	other
CL2001032144AA	other	0.00745	0.99255	other
CL2001032145AA	other	0.00543	0.99457	other
CL2001032147AA	NORMAL	0.8581	0.1419	NORMAL
CL2001032149AA (testset)	other	0.13602	0.86398	other
CL2001032151AA	other	0.00481	0.99519	other
CL2001032152AA	other	0.01225	0.98775	other
CL2001032153AA	other	0.01966	0.98034	other
CL2001032155AA	other	0.82257	0.17743	NORMAL
CL2001032156AA (testset)	other	0.12556	0.87444	other
CL2001032202AA (testset)	NORMAL	0.75277	0.24723	NORMAL
CL2001032206AA	NORMAL	0.8689	0.1311	NORMAL
CL2001032207AA	other	0.01789	0.98211	other
CL2001032209AA	other	0.01995	0.98005	other
CL2001032210AA	other	0.00777	0.99223	other
CL2001032211AA (testset)	other	0.0137	0.9863	other
CL2001032212AA	other	0.00807	0.99193	other
CL2001032213AA	other	0.1919	0.8081	other
CL2001032214AA (testset)	other	0.17218	0.82782	other
CL2001032217AA (testset)	other	0.02425	0.97575	other
CL2001032218AA	other	0.00767	0.99233	other
CL2001032219AA (testset)	other	0.00657	0.99343	other
CL2001032220AA	NORMAL	0.66008	0.33992	NORMAL
CL2001032222AA (testset)	other	0.01034	0.98966	other
CL2001032229AA (testset)	other	0.02007	0.97993	other
CL2001032231AA	other	0.09099	0.90901	other
CL2001032232AA	other	0.03082	0.96918	other
CL2001032233AA (testset)	other	0.02241	0.97759	other
CL2001032238AA	other	0.00478	0.99522	other
CL2001032239AA	other	0.07665	0.92335	other
CL2001032240AA	other	0.03628	0.96372	other
CL2001032241AA (testset)	other	0.12136	0.87864	other
CL2001032242AA	other	0.0685	0.9315	other
CL2001032243AA	other	0.12069	0.87931	other
CL2001032248AA	other	0.02925	0.97075	other
CL2001032249AA (testset)	other	0.03809	0.96191	other
CL2001032252AA (testset)	other	0.03832	0.96168	other
CL2001032254AA (testset)	other	0.05542	0.94458	other
CL2001032255AA	other	0.0567	0.9433	other
CL2001032256AA (testset)	NORMAL	0.51841	0.48159	NORMAL
CL2001032259AA (testset)	other	0.08276	0.91724	other
CL2001032260AA	other	0.05703	0.94297	other
CL2001032301AA	other	0.05974	0.94026	other
CL2001032304AA	NORMAL	0.62307	0.37693	NORMAL
CL2001032305AA (testset)	other	0.15775	0.84225	other
CL2001032306AA (testset)	other	0.09063	0.90937	other
CL2001032307AA (testset)	other	0.17431	0.82569	other
CL2001032308AA	other	0.02076	0.97924	other
CL2001032309AA	other	0.02206	0.97794	other
CL2001032310AA	other	0.01189	0.98811	other
CL2001032311AA (testset)	other	0.03442	0.96558	other
CL2001032312AA	other	0.02521	0.97479	other
CL2001032313AA (testset)	other	0.01438	0.98562	other
CL2001032314AA (testset)	other	0.01889	0.98111	other
CL2001032316AA	other	0.027	0.973	other
CL2001032601AA	other	0.0404	0.9596	other
CL2001032602AA	other	0.00609	0.99391	other
CL2001032604AA	other	0.00801	0.99199	other
CL2001032607AA	other	0.0032	0.9968	other
CL2001032608AA	other	0.01085	0.98915	other
CL2001032610AA	other	0.01481	0.98519	other
CL2001032612AA	other	0.02173	0.97827	other
CL2001032613AA (testset)	other	0.04643	0.95357	other
CL2001032614AA	other	0.01213	0.98787	other
CL2001032616AA	other	0.03787	0.96213	other
CL2001032617AA (testset)	other	0.01451	0.98549	other
CL2001032620AA (testset)	other	0.04121	0.95879	other
CL2001032625AA	other	0.02764	0.97236	other
CL2001032627AA	other	0.0199	0.9801	other
CL2001032628AA	other	0.04273	0.95727	other
CL2001032629AA	other	0.00361	0.99639	other
CL2001032630AA (testset)	other	0.05119	0.94881	other
CL2001032632AA	other	0.01302	0.98698	other
CL2001032638AA	other	0.016	0.984	other
CL2001032640AA (testset)	other	0.02157	0.97843	other
CL2001032643AA	other	0.11618	0.88382	other
CL2001032644AA (testset)	other	0.03222	0.96778	other
CL2001032647AA	other	0.21488	0.78512	other
CL2001032701AA	other	0.01727	0.98273	other
CL2001032702AA	other	0.05091	0.94909	other
CL2001032703AA	other	0.09744	0.90256	other
CL2001032704AA	other	0.09672	0.90328	other
CL2001032706AA (testset)	other	0.06733	0.93267	other
CL2001032709AA	other	0.08096	0.91904	other
CL2001032716AA	other	0.02994	0.97006	other
CL2001032717AA	other	0.01735	0.98265	other
CL2001032718AA (testset)	NORMAL	0.76928	0.23072	NORMAL
CL2001032719AA	other	0.0785	0.9215	other
CL2001032720AA	other	0.00464	0.99536	other
CL2001032722AA	other	0.00675	0.99325	other
CL2001032724AA	NORMAL	0.78451	0.21549	NORMAL
CL2001032725AA	NORMAL	0.6604	0.3396	NORMAL
CL2001032727AA	NORMAL	0.60881	0.39119	NORMAL
CL2001032729AA	other	0.08178	0.91822	other
CL2001032730AA (testset)	other	0.02454	0.97546	other
CL2001032732AA (testset)	other	0.00879	0.99121	other
CL2001032733AA	other	0.01408	0.98592	other
CL2001032738AA (testset)	other	0.06708	0.93292	other
CL2001032742AA (testset)	other	0.02626	0.97374	other
CL2001032746AA	other	0.03036	0.96964	other
CL2001032747AA	other	0.02299	0.97701	other
CL2001032833AA	other	0.0205	0.9795	other
CL2001032836AA (testset)	other	0.0262	0.9738	other
CL2001032838AA (testset)	other	0.01937	0.98063	other
CL2001032839AA	other	0.0393	0.9607	other
CL2001032841AA	other	0.0167	0.9833	other
CL2001032842AA	other	0.01259	0.98741	other
CL2001032843AA (testset)	other	0.00963	0.99037	other
CL2001032845AA (testset)	other	0.07212	0.92788	other
CL2001032846AA	other	0.03362	0.96638	other
CL2001032847AA	other	0.05091	0.94909	other
CL2001032848AA	other	0.81848	0.18152	NORMAL
CL2001032850AA	other	0.01268	0.98732	other
CL2001032853AA	other	0.07908	0.92092	other
CL2001032854AA (testset)	other	0.01045	0.98955	other
CL2001032856AA	other	0.04533	0.95467	other
CL2001032857AA	other	0.021	0.979	other
CL2001032860AA (testset)	other	0.00578	0.99422	other
CL2001040305AA	other	0.00548	0.99452	other
CL2001040306AA	other	0.06739	0.93261	other
CL2001041708AA	other	0.06026	0.93974	other
CL2001041711AA	other	0.05915	0.94085	other
CL2001041716AA	other	0.03775	0.96225	other
CL2001042501AA (testset)	other	0.00334	0.99666	other
CL2001042505AA	other	0.00263	0.99737	other
CL2001042506AA (testset)	other	0.32629	0.67371	other