GO:0007178

GO:0007178

transmembrane receptor protein serine/threonine kinase signaling pathway (annotated genes)

Biological Process

Parent node

GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway

This leaf node contains 13 genes

The following 7 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
1814_at	TGFBR2	transforming growth factor, beta receptor II (70/80kDa)	1.865	-0.1654
1815_g_at	TGFBR2	transforming growth factor, beta receptor II (70/80kDa)	1.7549	-0.1557
36451_at	ACVR1B	activin A receptor, type IB	-0.4674	0.0415
1100_at	IRAK1	interleukin-1 receptor-associated kinase 1	-0.384	0.0341
39764_at	ACVR1	activin A receptor, type I	-0.1299	0.0115
39998_at	BMPR2	bone morphogenetic protein receptor, type II (serine/threonine kinase)	0.0818	-0.0073
34056_g_at	ACVR1B	activin A receptor, type IB	0.0432	-0.0038

Performance on training data

• Error rate: 0.01481
• Performance: 0.13222
• Redundancy: 3.81672

	Sensitivity	Specificity
NORMAL	1	0.98387
other	0.98387	1

Performance on test data

• Error rate: 0.04412
• Performance: 0.12906
• Redundancy: 3.74698

	Sensitivity	Specificity
NORMAL	0.83333	0.96774
other	0.96774	0.83333

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0	1	other
CL2001031607AA	other	0.01697	0.98303	other
CL2001031608AA	other	0.04395	0.95605	other
CL2001031609AA	other	1e-05	0.99999	other
CL2001031611AA	other	0.00369	0.99631	other
CL2001031612AA	other	0.11502	0.88498	other
CL2001031613AA	other	0.16127	0.83873	other
CL2001031615AA	other	0.00115	0.99885	other
CL2001031616AA (testset)	other	0.00377	0.99623	other
CL2001031618AA	other	0.00194	0.99806	other
CL2001031620AA (testset)	other	4e-05	0.99996	other
CL2001031621AA (testset)	other	7e-05	0.99993	other
CL2001031622AA	other	7e-05	0.99993	other
CL2001031625AA	other	4e-04	0.9996	other
CL2001031627AA (testset)	other	0.00389	0.99611	other
CL2001031628AA (testset)	other	0.00764	0.99236	other
CL2001031629AA	other	6e-04	0.9994	other
CL2001031630AA (testset)	other	6e-05	0.99994	other
CL2001031631AA	other	0.00018	0.99982	other
CL2001031632AA	other	0.00063	0.99937	other
CL2001031634AA	other	0.00021	0.99979	other
CL2001031635AA	other	0.00873	0.99127	other
CL2001031636AA	other	0.00034	0.99966	other
CL2001032002AA	other	0.00181	0.99819	other
CL2001032005AA	other	0.00016	0.99984	other
CL2001032008AA	other	0.00047	0.99953	other
CL2001032009AA (testset)	other	0.00035	0.99965	other
CL2001032010AA (testset)	NORMAL	0.80046	0.19954	NORMAL
CL2001032011AA (testset)	other	0.07137	0.92863	other
CL2001032012AA (testset)	other	0.07622	0.92378	other
CL2001032013AA (testset)	other	0.03422	0.96578	other
CL2001032015AA	other	0.36902	0.63098	other
CL2001032016AA (testset)	other	0.01042	0.98958	other
CL2001032019AA	other	0.01085	0.98915	other
CL2001032020AA (testset)	other	0.01116	0.98884	other
CL2001032025AA	other	0.00066	0.99934	other
CL2001032026AA	other	0.00175	0.99825	other
CL2001032027AA	other	0.07726	0.92274	other
CL2001032030AA	other	6e-04	0.9994	other
CL2001032031AA (testset)	other	0.02115	0.97885	other
CL2001032032AA	other	0.02917	0.97083	other
CL2001032034AA	other	0.33448	0.66552	other
CL2001032036AA	other	0.00918	0.99082	other
CL2001032041AA	NORMAL	0.87436	0.12564	NORMAL
CL2001032043AA	NORMAL	0.99488	0.00512	NORMAL
CL2001032044AA	other	6e-05	0.99994	other
CL2001032045AA (testset)	NORMAL	0.97982	0.02018	NORMAL
CL2001032046AA	NORMAL	0.88212	0.11788	NORMAL
CL2001032101AA	other	0.00103	0.99897	other
CL2001032102AA	NORMAL	0.98449	0.01551	NORMAL
CL2001032103AA	other	0.00041	0.99959	other
CL2001032104AA	other	3e-05	0.99997	other
CL2001032105AA	other	0.00061	0.99939	other
CL2001032107AA	other	2e-04	0.9998	other
CL2001032108AA	other	0.00182	0.99818	other
CL2001032109AA (testset)	other	0.03039	0.96961	other
CL2001032110AA	other	0.04921	0.95079	other
CL2001032111AA	other	0.01869	0.98131	other
CL2001032113AA (testset)	other	1e-05	0.99999	other
CL2001032114AA	other	0.00331	0.99669	other
CL2001032115AA (testset)	other	0.00086	0.99914	other
CL2001032116AA (testset)	other	0.00388	0.99612	other
CL2001032117AA	other	0.00512	0.99488	other
CL2001032121AA	other	3e-05	0.99997	other
CL2001032122AA	other	0.00351	0.99649	other
CL2001032124AA	other	0.00012	0.99988	other
CL2001032125AA	other	0.00915	0.99085	other
CL2001032127AA (testset)	other	1e-05	0.99999	other
CL2001032128AA (testset)	NORMAL	0.96714	0.03286	NORMAL
CL2001032129AA (testset)	other	0.00026	0.99974	other
CL2001032130AA	other	0.00666	0.99334	other
CL2001032132AA	other	0.03673	0.96327	other
CL2001032134AA (testset)	other	0.12412	0.87588	other
CL2001032135AA	other	0.02291	0.97709	other
CL2001032136AA (testset)	other	0.0419	0.9581	other
CL2001032138AA (testset)	other	0.11383	0.88617	other
CL2001032141AA (testset)	other	0.00299	0.99701	other
CL2001032142AA	other	0.00168	0.99832	other
CL2001032144AA	other	1e-05	0.99999	other
CL2001032145AA	other	0.02954	0.97046	other
CL2001032147AA	NORMAL	0.98815	0.01185	NORMAL
CL2001032149AA (testset)	other	0.15696	0.84304	other
CL2001032151AA	other	2e-05	0.99998	other
CL2001032152AA	other	0.00295	0.99705	other
CL2001032153AA	other	0.0068	0.9932	other
CL2001032155AA	other	0.81882	0.18118	NORMAL
CL2001032156AA (testset)	other	0.04791	0.95209	other
CL2001032202AA (testset)	NORMAL	0.94226	0.05774	NORMAL
CL2001032206AA	NORMAL	0.83605	0.16395	NORMAL
CL2001032207AA	other	0.00035	0.99965	other
CL2001032209AA	other	7e-05	0.99993	other
CL2001032210AA	other	1e-05	0.99999	other
CL2001032211AA (testset)	other	0.00229	0.99771	other
CL2001032212AA	other	0.00038	0.99962	other
CL2001032213AA	other	0.11964	0.88036	other
CL2001032214AA (testset)	other	0.71965	0.28035	NORMAL
CL2001032217AA (testset)	other	1e-05	0.99999	other
CL2001032218AA	other	0.00011	0.99989	other
CL2001032219AA (testset)	other	3e-05	0.99997	other
CL2001032220AA	NORMAL	0.89997	0.10003	NORMAL
CL2001032222AA (testset)	other	2e-05	0.99998	other
CL2001032229AA (testset)	other	0.00123	0.99877	other
CL2001032231AA	other	0.00514	0.99486	other
CL2001032232AA	other	0.00289	0.99711	other
CL2001032233AA (testset)	other	1e-04	0.9999	other
CL2001032238AA	other	0.00035	0.99965	other
CL2001032239AA	other	0.00025	0.99975	other
CL2001032240AA	other	0.00033	0.99967	other
CL2001032241AA (testset)	other	0.04913	0.95087	other
CL2001032242AA	other	0.00372	0.99628	other
CL2001032243AA	other	0.00249	0.99751	other
CL2001032248AA	other	0.00029	0.99971	other
CL2001032249AA (testset)	other	0.00261	0.99739	other
CL2001032252AA (testset)	other	0.00076	0.99924	other
CL2001032254AA (testset)	other	0.01522	0.98478	other
CL2001032255AA	other	0.00024	0.99976	other
CL2001032256AA (testset)	NORMAL	0.38502	0.61498	other
CL2001032259AA (testset)	other	0.00047	0.99953	other
CL2001032260AA	other	0.00211	0.99789	other
CL2001032301AA	other	0.00252	0.99748	other
CL2001032304AA	NORMAL	0.69191	0.30809	NORMAL
CL2001032305AA (testset)	other	0.00148	0.99852	other
CL2001032306AA (testset)	other	0.00254	0.99746	other
CL2001032307AA (testset)	other	0.61137	0.38863	NORMAL
CL2001032308AA	other	0.00332	0.99668	other
CL2001032309AA	other	0.0011	0.9989	other
CL2001032310AA	other	1e-04	0.9999	other
CL2001032311AA (testset)	other	0.00043	0.99957	other
CL2001032312AA	other	0.00123	0.99877	other
CL2001032313AA (testset)	other	0.00033	0.99967	other
CL2001032314AA (testset)	other	0.00043	0.99957	other
CL2001032316AA	other	0.0023	0.9977	other
CL2001032601AA	other	0.00026	0.99974	other
CL2001032602AA	other	9e-05	0.99991	other
CL2001032604AA	other	2e-04	0.9998	other
CL2001032607AA	other	1e-05	0.99999	other
CL2001032608AA	other	9e-05	0.99991	other
CL2001032610AA	other	9e-04	0.9991	other
CL2001032612AA	other	0.00495	0.99505	other
CL2001032613AA (testset)	other	0.00019	0.99981	other
CL2001032614AA	other	0.00014	0.99986	other
CL2001032616AA	other	8e-04	0.9992	other
CL2001032617AA (testset)	other	0.00104	0.99896	other
CL2001032620AA (testset)	other	0.00328	0.99672	other
CL2001032625AA	other	0.00017	0.99983	other
CL2001032627AA	other	6e-05	0.99994	other
CL2001032628AA	other	0.00052	0.99948	other
CL2001032629AA	other	1e-05	0.99999	other
CL2001032630AA (testset)	other	3e-04	0.9997	other
CL2001032632AA	other	6e-05	0.99994	other
CL2001032638AA	other	0.00108	0.99892	other
CL2001032640AA (testset)	other	0.00076	0.99924	other
CL2001032643AA	other	0.01185	0.98815	other
CL2001032644AA (testset)	other	4e-04	0.9996	other
CL2001032647AA	other	0.06164	0.93836	other
CL2001032701AA	other	0.08384	0.91616	other
CL2001032702AA	other	0.00471	0.99529	other
CL2001032703AA	other	0.44443	0.55557	other
CL2001032704AA	other	0.06837	0.93163	other
CL2001032706AA (testset)	other	0.03254	0.96746	other
CL2001032709AA	other	0.00055	0.99945	other
CL2001032716AA	other	0.00163	0.99837	other
CL2001032717AA	other	0.00043	0.99957	other
CL2001032718AA (testset)	NORMAL	0.99914	0.00086	NORMAL
CL2001032719AA	other	0.03026	0.96974	other
CL2001032720AA	other	0	1	other
CL2001032722AA	other	6e-05	0.99994	other
CL2001032724AA	NORMAL	0.77768	0.22232	NORMAL
CL2001032725AA	NORMAL	0.78858	0.21142	NORMAL
CL2001032727AA	NORMAL	0.81428	0.18572	NORMAL
CL2001032729AA	other	0.02105	0.97895	other
CL2001032730AA (testset)	other	9e-05	0.99991	other
CL2001032732AA (testset)	other	1e-05	0.99999	other
CL2001032733AA	other	0.00722	0.99278	other
CL2001032738AA (testset)	other	0.00224	0.99776	other
CL2001032742AA (testset)	other	0.00223	0.99777	other
CL2001032746AA	other	0.01005	0.98995	other
CL2001032747AA	other	0.00403	0.99597	other
CL2001032833AA	other	4e-05	0.99996	other
CL2001032836AA (testset)	other	6e-05	0.99994	other
CL2001032838AA (testset)	other	0.00196	0.99804	other
CL2001032839AA	other	0.00052	0.99948	other
CL2001032841AA	other	0.00159	0.99841	other
CL2001032842AA	other	4e-05	0.99996	other
CL2001032843AA (testset)	other	4e-05	0.99996	other
CL2001032845AA (testset)	other	0.00285	0.99715	other
CL2001032846AA	other	0.00345	0.99655	other
CL2001032847AA	other	0.00033	0.99967	other
CL2001032848AA	other	0.93598	0.06402	NORMAL
CL2001032850AA	other	4e-05	0.99996	other
CL2001032853AA	other	5e-05	0.99995	other
CL2001032854AA (testset)	other	0.00018	0.99982	other
CL2001032856AA	other	0.00748	0.99252	other
CL2001032857AA	other	0.02061	0.97939	other
CL2001032860AA (testset)	other	1e-05	0.99999	other
CL2001040305AA	other	3e-05	0.99997	other
CL2001040306AA	other	0.00116	0.99884	other
CL2001041708AA	other	0.00048	0.99952	other
CL2001041711AA	other	0.00939	0.99061	other
CL2001041716AA	other	0.1211	0.8789	other
CL2001042501AA (testset)	other	0	1	other
CL2001042505AA	other	0.00021	0.99979	other
CL2001042506AA (testset)	other	0.02575	0.97425	other