GO:0007156

GO:0007156

homophilic cell adhesion (annotated genes)

Biological Process

Parent node

GO:0016337	cell-cell adhesion

This leaf node contains 68 genes

The following 9 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
37196_at	CDH5	cadherin 5, type 2, VE-cadherin (vascular epithelium)	1.5279	-0.1355
39878_at	PCDH9	protocadherin 9	0.3368	-0.0299
657_at	PCDHGC3	protocadherin gamma subfamily C, 3	0.2381	-0.0211
977_s_at	CDH1	cadherin 1, type 1, E-cadherin (epithelial)	-0.232	0.0206
40454_at	FAT	FAT tumor suppressor homolog 1 (Drosophila)	-0.1804	0.016
33468_at	DSG2	desmoglein 2	-0.1702	0.0151
36892_at	ITGA7	integrin, alpha 7	0.0983	-0.0087
2082_s_at	CDH1	cadherin 1, type 1, E-cadherin (epithelial)	-0.0326	0.0029
483_g_at	CDH13	cadherin 13, H-cadherin (heart)	0.0256	-0.0023

Performance on training data

• Error rate: 0.02222
• Performance: 0.15891
• Redundancy: 3.19245

	Sensitivity	Specificity
NORMAL	0.81818	0.99194
other	0.99194	0.81818

Performance on test data

• Error rate: 0
• Performance: 0.10007
• Redundancy: 3.15861

	Sensitivity	Specificity
NORMAL	1	1
other	1	1

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00332	0.99668	other
CL2001031607AA	other	0.09223	0.90777	other
CL2001031608AA	other	0.01718	0.98282	other
CL2001031609AA	other	0.06221	0.93779	other
CL2001031611AA	other	0.06036	0.93964	other
CL2001031612AA	other	0.02493	0.97507	other
CL2001031613AA	other	0.02389	0.97611	other
CL2001031615AA	other	0.01009	0.98991	other
CL2001031616AA (testset)	other	0.0328	0.9672	other
CL2001031618AA	other	0.01302	0.98698	other
CL2001031620AA (testset)	other	0.00285	0.99715	other
CL2001031621AA (testset)	other	0.01451	0.98549	other
CL2001031622AA	other	0.00377	0.99623	other
CL2001031625AA	other	0.0264	0.9736	other
CL2001031627AA (testset)	other	0.0317	0.9683	other
CL2001031628AA (testset)	other	0.02013	0.97987	other
CL2001031629AA	other	0.00269	0.99731	other
CL2001031630AA (testset)	other	0.01191	0.98809	other
CL2001031631AA	other	0.00462	0.99538	other
CL2001031632AA	other	0.00881	0.99119	other
CL2001031634AA	other	0.06594	0.93406	other
CL2001031635AA	other	0.02041	0.97959	other
CL2001031636AA	other	0.01292	0.98708	other
CL2001032002AA	other	0.04146	0.95854	other
CL2001032005AA	other	0.00847	0.99153	other
CL2001032008AA	other	0.00318	0.99682	other
CL2001032009AA (testset)	other	0.0071	0.9929	other
CL2001032010AA (testset)	NORMAL	0.92402	0.07598	NORMAL
CL2001032011AA (testset)	other	0.06515	0.93485	other
CL2001032012AA (testset)	other	0.01251	0.98749	other
CL2001032013AA (testset)	other	0.08642	0.91358	other
CL2001032015AA	other	0.23599	0.76401	other
CL2001032016AA (testset)	other	0.00354	0.99646	other
CL2001032019AA	other	0.03818	0.96182	other
CL2001032020AA (testset)	other	0.00638	0.99362	other
CL2001032025AA	other	0.02169	0.97831	other
CL2001032026AA	other	0.00745	0.99255	other
CL2001032027AA	other	0.0214	0.9786	other
CL2001032030AA	other	0.01895	0.98105	other
CL2001032031AA (testset)	other	0.04978	0.95022	other
CL2001032032AA	other	0.02226	0.97774	other
CL2001032034AA	other	0.03364	0.96636	other
CL2001032036AA	other	0.02239	0.97761	other
CL2001032041AA	NORMAL	0.60409	0.39591	NORMAL
CL2001032043AA	NORMAL	0.6037	0.3963	NORMAL
CL2001032044AA	other	0.02461	0.97539	other
CL2001032045AA (testset)	NORMAL	0.63494	0.36506	NORMAL
CL2001032046AA	NORMAL	0.77118	0.22882	NORMAL
CL2001032101AA	other	0.30587	0.69413	other
CL2001032102AA	NORMAL	0.94561	0.05439	NORMAL
CL2001032103AA	other	0.04315	0.95685	other
CL2001032104AA	other	0.03812	0.96188	other
CL2001032105AA	other	0.00731	0.99269	other
CL2001032107AA	other	0.00988	0.99012	other
CL2001032108AA	other	0.01419	0.98581	other
CL2001032109AA (testset)	other	0.0163	0.9837	other
CL2001032110AA	other	0.08498	0.91502	other
CL2001032111AA	other	0.022	0.978	other
CL2001032113AA (testset)	other	0.01454	0.98546	other
CL2001032114AA	other	0.01997	0.98003	other
CL2001032115AA (testset)	other	0.01751	0.98249	other
CL2001032116AA (testset)	other	0.018	0.982	other
CL2001032117AA	other	0.00594	0.99406	other
CL2001032121AA	other	0.02018	0.97982	other
CL2001032122AA	other	0.00601	0.99399	other
CL2001032124AA	other	0.01479	0.98521	other
CL2001032125AA	other	0.01228	0.98772	other
CL2001032127AA (testset)	other	0.08764	0.91236	other
CL2001032128AA (testset)	NORMAL	0.55766	0.44234	NORMAL
CL2001032129AA (testset)	other	0.00387	0.99613	other
CL2001032130AA	other	0.00842	0.99158	other
CL2001032132AA	other	0.01478	0.98522	other
CL2001032134AA (testset)	other	0.02833	0.97167	other
CL2001032135AA	other	0.04209	0.95791	other
CL2001032136AA (testset)	other	0.00964	0.99036	other
CL2001032138AA (testset)	other	0.01595	0.98405	other
CL2001032141AA (testset)	other	0.01056	0.98944	other
CL2001032142AA	other	0.00847	0.99153	other
CL2001032144AA	other	0.00786	0.99214	other
CL2001032145AA	other	0.00498	0.99502	other
CL2001032147AA	NORMAL	0.967	0.033	NORMAL
CL2001032149AA (testset)	other	0.02834	0.97166	other
CL2001032151AA	other	0.02692	0.97308	other
CL2001032152AA	other	0.00738	0.99262	other
CL2001032153AA	other	0.02114	0.97886	other
CL2001032155AA	other	0.39317	0.60683	other
CL2001032156AA (testset)	other	0.0725	0.9275	other
CL2001032202AA (testset)	NORMAL	0.93764	0.06236	NORMAL
CL2001032206AA	NORMAL	0.87075	0.12925	NORMAL
CL2001032207AA	other	0.01248	0.98752	other
CL2001032209AA	other	0.00442	0.99558	other
CL2001032210AA	other	0.00638	0.99362	other
CL2001032211AA (testset)	other	0.00676	0.99324	other
CL2001032212AA	other	0.01082	0.98918	other
CL2001032213AA	other	0.08936	0.91064	other
CL2001032214AA (testset)	other	0.02703	0.97297	other
CL2001032217AA (testset)	other	0.00635	0.99365	other
CL2001032218AA	other	0.00499	0.99501	other
CL2001032219AA (testset)	other	0.00927	0.99073	other
CL2001032220AA	NORMAL	0.6629	0.3371	NORMAL
CL2001032222AA (testset)	other	0.00556	0.99444	other
CL2001032229AA (testset)	other	0.02044	0.97956	other
CL2001032231AA	other	0.04638	0.95362	other
CL2001032232AA	other	0.00485	0.99515	other
CL2001032233AA (testset)	other	0.01751	0.98249	other
CL2001032238AA	other	0.00703	0.99297	other
CL2001032239AA	other	0.0131	0.9869	other
CL2001032240AA	other	0.00631	0.99369	other
CL2001032241AA (testset)	other	0.02564	0.97436	other
CL2001032242AA	other	0.00614	0.99386	other
CL2001032243AA	other	0.01067	0.98933	other
CL2001032248AA	other	0.00658	0.99342	other
CL2001032249AA (testset)	other	0.06533	0.93467	other
CL2001032252AA (testset)	other	0.03646	0.96354	other
CL2001032254AA (testset)	other	0.0087	0.9913	other
CL2001032255AA	other	0.01214	0.98786	other
CL2001032256AA (testset)	NORMAL	0.60217	0.39783	NORMAL
CL2001032259AA (testset)	other	0.04311	0.95689	other
CL2001032260AA	other	0.34471	0.65529	other
CL2001032301AA	other	0.02816	0.97184	other
CL2001032304AA	NORMAL	0.29893	0.70107	other
CL2001032305AA (testset)	other	0.01115	0.98885	other
CL2001032306AA (testset)	other	0.02448	0.97552	other
CL2001032307AA (testset)	other	0.17739	0.82261	other
CL2001032308AA	other	0.0102	0.9898	other
CL2001032309AA	other	0.00698	0.99302	other
CL2001032310AA	other	0.00583	0.99417	other
CL2001032311AA (testset)	other	0.00664	0.99336	other
CL2001032312AA	other	0.01641	0.98359	other
CL2001032313AA (testset)	other	0.02105	0.97895	other
CL2001032314AA (testset)	other	0.01194	0.98806	other
CL2001032316AA	other	0.01827	0.98173	other
CL2001032601AA	other	0.00763	0.99237	other
CL2001032602AA	other	0.00935	0.99065	other
CL2001032604AA	other	0.02349	0.97651	other
CL2001032607AA	other	0.00438	0.99562	other
CL2001032608AA	other	0.0226	0.9774	other
CL2001032610AA	other	0.00792	0.99208	other
CL2001032612AA	other	0.01248	0.98752	other
CL2001032613AA (testset)	other	0.01291	0.98709	other
CL2001032614AA	other	0.00718	0.99282	other
CL2001032616AA	other	0.01315	0.98685	other
CL2001032617AA (testset)	other	0.00945	0.99055	other
CL2001032620AA (testset)	other	0.01596	0.98404	other
CL2001032625AA	other	0.00765	0.99235	other
CL2001032627AA	other	0.00376	0.99624	other
CL2001032628AA	other	0.0125	0.9875	other
CL2001032629AA	other	0.00577	0.99423	other
CL2001032630AA (testset)	other	0.00961	0.99039	other
CL2001032632AA	other	0.00672	0.99328	other
CL2001032638AA	other	0.00508	0.99492	other
CL2001032640AA (testset)	other	0.00554	0.99446	other
CL2001032643AA	other	0.01369	0.98631	other
CL2001032644AA (testset)	other	0.00812	0.99188	other
CL2001032647AA	other	0.05531	0.94469	other
CL2001032701AA	other	0.00708	0.99292	other
CL2001032702AA	other	0.03236	0.96764	other
CL2001032703AA	other	0.00892	0.99108	other
CL2001032704AA	other	0.01626	0.98374	other
CL2001032706AA (testset)	other	0.02873	0.97127	other
CL2001032709AA	other	0.01229	0.98771	other
CL2001032716AA	other	0.01162	0.98838	other
CL2001032717AA	other	0.00887	0.99113	other
CL2001032718AA (testset)	NORMAL	0.76841	0.23159	NORMAL
CL2001032719AA	other	0.00518	0.99482	other
CL2001032720AA	other	0.01709	0.98291	other
CL2001032722AA	other	0.00436	0.99564	other
CL2001032724AA	NORMAL	0.24443	0.75557	other
CL2001032725AA	NORMAL	0.67593	0.32407	NORMAL
CL2001032727AA	NORMAL	0.66549	0.33451	NORMAL
CL2001032729AA	other	0.01065	0.98935	other
CL2001032730AA (testset)	other	0.00584	0.99416	other
CL2001032732AA (testset)	other	0.00387	0.99613	other
CL2001032733AA	other	0.00469	0.99531	other
CL2001032738AA (testset)	other	0.00592	0.99408	other
CL2001032742AA (testset)	other	0.01119	0.98881	other
CL2001032746AA	other	0.00973	0.99027	other
CL2001032747AA	other	0.04169	0.95831	other
CL2001032833AA	other	0.01263	0.98737	other
CL2001032836AA (testset)	other	0.00689	0.99311	other
CL2001032838AA (testset)	other	0.00605	0.99395	other
CL2001032839AA	other	0.05738	0.94262	other
CL2001032841AA	other	0.0124	0.9876	other
CL2001032842AA	other	0.01542	0.98458	other
CL2001032843AA (testset)	other	0.01582	0.98418	other
CL2001032845AA (testset)	other	0.04745	0.95255	other
CL2001032846AA	other	0.06105	0.93895	other
CL2001032847AA	other	0.05325	0.94675	other
CL2001032848AA	other	0.78243	0.21757	NORMAL
CL2001032850AA	other	0.01091	0.98909	other
CL2001032853AA	other	0.00656	0.99344	other
CL2001032854AA (testset)	other	0.01909	0.98091	other
CL2001032856AA	other	0.0103	0.9897	other
CL2001032857AA	other	0.00358	0.99642	other
CL2001032860AA (testset)	other	0.00864	0.99136	other
CL2001040305AA	other	0.00802	0.99198	other
CL2001040306AA	other	0.03073	0.96927	other
CL2001041708AA	other	0.03266	0.96734	other
CL2001041711AA	other	0.0094	0.9906	other
CL2001041716AA	other	0.05417	0.94583	other
CL2001042501AA (testset)	other	0.0058	0.9942	other
CL2001042505AA	other	0.00491	0.99509	other
CL2001042506AA (testset)	other	0.11694	0.88306	other