GO:0007010

GO:0007010

cytoskeleton organization and biogenesis (annotated genes)

Biological Process

Parent node

GO:0007010	cytoskeleton organization and biogenesis

This leaf node contains 42 genes

The following 8 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
37951_at	DLC1	deleted in liver cancer 1	1.158	-0.1027
32780_at	BPAG1	bullous pemphigoid antigen 1, 230/240kDa	0.6779	-0.0601
32145_at	ADD1	adducin 1 (alpha)	0.3178	-0.0282
39597_at	ABLIM3	actin binding LIM protein family, member 3	0.1724	-0.0153
36275_at	SEMA6A	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.1365	-0.0121
38839_at	PFN2	profilin 2	-0.1189	0.0105
38840_s_at	PFN2	profilin 2	-0.0868	0.0077
37574_at	NEDD9	neural precursor cell expressed, developmentally down-regulated 9	0.0111	-0.001

Performance on training data

• Error rate: 0.02222
• Performance: 0.19343
• Redundancy: 3.01654

	Sensitivity	Specificity
NORMAL	0.90909	0.98387
other	0.98387	0.90909

Performance on test data

• Error rate: 0.05882
• Performance: 0.21416
• Redundancy: 2.98246

	Sensitivity	Specificity
NORMAL	0.5	0.98387
other	0.98387	0.5

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00465	0.99535	other
CL2001031607AA	other	0.03151	0.96849	other
CL2001031608AA	other	0.03405	0.96595	other
CL2001031609AA	other	0.02325	0.97675	other
CL2001031611AA	other	0.01069	0.98931	other
CL2001031612AA	other	0.06804	0.93196	other
CL2001031613AA	other	0.27741	0.72259	other
CL2001031615AA	other	0.0125	0.9875	other
CL2001031616AA (testset)	other	0.02217	0.97783	other
CL2001031618AA	other	0.01579	0.98421	other
CL2001031620AA (testset)	other	0.00512	0.99488	other
CL2001031621AA (testset)	other	0.03734	0.96266	other
CL2001031622AA	other	0.00718	0.99282	other
CL2001031625AA	other	0.16001	0.83999	other
CL2001031627AA (testset)	other	0.0095	0.9905	other
CL2001031628AA (testset)	other	0.01641	0.98359	other
CL2001031629AA	other	0.00976	0.99024	other
CL2001031630AA (testset)	other	0.03786	0.96214	other
CL2001031631AA	other	0.01865	0.98135	other
CL2001031632AA	other	0.00494	0.99506	other
CL2001031634AA	other	0.05699	0.94301	other
CL2001031635AA	other	0.02142	0.97858	other
CL2001031636AA	other	0.01999	0.98001	other
CL2001032002AA	other	0.01738	0.98262	other
CL2001032005AA	other	0.0053	0.9947	other
CL2001032008AA	other	0.01486	0.98514	other
CL2001032009AA (testset)	other	0.01957	0.98043	other
CL2001032010AA (testset)	NORMAL	0.25259	0.74741	other
CL2001032011AA (testset)	other	0.07784	0.92216	other
CL2001032012AA (testset)	other	0.08825	0.91175	other
CL2001032013AA (testset)	other	0.09183	0.90817	other
CL2001032015AA	other	0.21322	0.78678	other
CL2001032016AA (testset)	other	0.01076	0.98924	other
CL2001032019AA	other	0.02708	0.97292	other
CL2001032020AA (testset)	other	0.03115	0.96885	other
CL2001032025AA	other	0.01849	0.98151	other
CL2001032026AA	other	0.04463	0.95537	other
CL2001032027AA	other	0.06845	0.93155	other
CL2001032030AA	other	0.01122	0.98878	other
CL2001032031AA (testset)	other	0.1184	0.8816	other
CL2001032032AA	other	0.0869	0.9131	other
CL2001032034AA	other	0.44103	0.55897	other
CL2001032036AA	other	0.01408	0.98592	other
CL2001032041AA	NORMAL	0.75201	0.24799	NORMAL
CL2001032043AA	NORMAL	0.82757	0.17243	NORMAL
CL2001032044AA	other	0.03016	0.96984	other
CL2001032045AA (testset)	NORMAL	0.31213	0.68787	other
CL2001032046AA	NORMAL	0.55577	0.44423	NORMAL
CL2001032101AA	other	0.15061	0.84939	other
CL2001032102AA	NORMAL	0.5999	0.4001	NORMAL
CL2001032103AA	other	0.0153	0.9847	other
CL2001032104AA	other	0.01289	0.98711	other
CL2001032105AA	other	0.00918	0.99082	other
CL2001032107AA	other	0.02011	0.97989	other
CL2001032108AA	other	0.04698	0.95302	other
CL2001032109AA (testset)	other	0.05642	0.94358	other
CL2001032110AA	other	0.10498	0.89502	other
CL2001032111AA	other	0.02632	0.97368	other
CL2001032113AA (testset)	other	0.0026	0.9974	other
CL2001032114AA	other	0.0216	0.9784	other
CL2001032115AA (testset)	other	0.00862	0.99138	other
CL2001032116AA (testset)	other	0.04605	0.95395	other
CL2001032117AA	other	0.03704	0.96296	other
CL2001032121AA	other	0.01178	0.98822	other
CL2001032122AA	other	0.02249	0.97751	other
CL2001032124AA	other	0.03719	0.96281	other
CL2001032125AA	other	0.00341	0.99659	other
CL2001032127AA (testset)	other	0.06024	0.93976	other
CL2001032128AA (testset)	NORMAL	0.64882	0.35118	NORMAL
CL2001032129AA (testset)	other	0.01071	0.98929	other
CL2001032130AA	other	0.01325	0.98675	other
CL2001032132AA	other	0.06852	0.93148	other
CL2001032134AA (testset)	other	0.08912	0.91088	other
CL2001032135AA	other	0.18868	0.81132	other
CL2001032136AA (testset)	other	0.0593	0.9407	other
CL2001032138AA (testset)	other	0.05182	0.94818	other
CL2001032141AA (testset)	other	0.02199	0.97801	other
CL2001032142AA	other	0.02107	0.97893	other
CL2001032144AA	other	0.01056	0.98944	other
CL2001032145AA	other	0.01519	0.98481	other
CL2001032147AA	NORMAL	0.8072	0.1928	NORMAL
CL2001032149AA (testset)	other	0.13668	0.86332	other
CL2001032151AA	other	0.02369	0.97631	other
CL2001032152AA	other	0.00885	0.99115	other
CL2001032153AA	other	0.02343	0.97657	other
CL2001032155AA	other	0.52671	0.47329	NORMAL
CL2001032156AA (testset)	other	0.03527	0.96473	other
CL2001032202AA (testset)	NORMAL	0.88133	0.11867	NORMAL
CL2001032206AA	NORMAL	0.65479	0.34521	NORMAL
CL2001032207AA	other	0.01099	0.98901	other
CL2001032209AA	other	0.01856	0.98144	other
CL2001032210AA	other	0.04673	0.95327	other
CL2001032211AA (testset)	other	0.00441	0.99559	other
CL2001032212AA	other	0.0164	0.9836	other
CL2001032213AA	other	0.06911	0.93089	other
CL2001032214AA (testset)	other	0.31576	0.68424	other
CL2001032217AA (testset)	other	0.00503	0.99497	other
CL2001032218AA	other	0.00442	0.99558	other
CL2001032219AA (testset)	other	0.0321	0.9679	other
CL2001032220AA	NORMAL	0.7326	0.2674	NORMAL
CL2001032222AA (testset)	other	0.00531	0.99469	other
CL2001032229AA (testset)	other	0.0104	0.9896	other
CL2001032231AA	other	0.02769	0.97231	other
CL2001032232AA	other	0.03335	0.96665	other
CL2001032233AA (testset)	other	0.01368	0.98632	other
CL2001032238AA	other	0.01105	0.98895	other
CL2001032239AA	other	0.00895	0.99105	other
CL2001032240AA	other	0.00968	0.99032	other
CL2001032241AA (testset)	other	0.05983	0.94017	other
CL2001032242AA	other	0.01858	0.98142	other
CL2001032243AA	other	0.03351	0.96649	other
CL2001032248AA	other	0.0019	0.9981	other
CL2001032249AA (testset)	other	0.03311	0.96689	other
CL2001032252AA (testset)	other	0.026	0.974	other
CL2001032254AA (testset)	other	0.01917	0.98083	other
CL2001032255AA	other	0.01202	0.98798	other
CL2001032256AA (testset)	NORMAL	0.31504	0.68496	other
CL2001032259AA (testset)	other	0.03298	0.96702	other
CL2001032260AA	other	0.04109	0.95891	other
CL2001032301AA	other	0.01575	0.98425	other
CL2001032304AA	NORMAL	0.507	0.493	NORMAL
CL2001032305AA (testset)	other	0.01267	0.98733	other
CL2001032306AA (testset)	other	0.01077	0.98923	other
CL2001032307AA (testset)	other	0.52008	0.47992	NORMAL
CL2001032308AA	other	0.01012	0.98988	other
CL2001032309AA	other	0.0419	0.9581	other
CL2001032310AA	other	0.01256	0.98744	other
CL2001032311AA (testset)	other	0.01657	0.98343	other
CL2001032312AA	other	0.02314	0.97686	other
CL2001032313AA (testset)	other	0.0101	0.9899	other
CL2001032314AA (testset)	other	0.0192	0.9808	other
CL2001032316AA	other	0.02307	0.97693	other
CL2001032601AA	other	0.00793	0.99207	other
CL2001032602AA	other	0.01413	0.98587	other
CL2001032604AA	other	0.11793	0.88207	other
CL2001032607AA	other	0.01919	0.98081	other
CL2001032608AA	other	0.01182	0.98818	other
CL2001032610AA	other	0.01379	0.98621	other
CL2001032612AA	other	0.01445	0.98555	other
CL2001032613AA (testset)	other	0.0058	0.9942	other
CL2001032614AA	other	0.02447	0.97553	other
CL2001032616AA	other	0.01438	0.98562	other
CL2001032617AA (testset)	other	0.00767	0.99233	other
CL2001032620AA (testset)	other	0.0145	0.9855	other
CL2001032625AA	other	0.00346	0.99654	other
CL2001032627AA	other	0.00716	0.99284	other
CL2001032628AA	other	0.01556	0.98444	other
CL2001032629AA	other	0.00752	0.99248	other
CL2001032630AA (testset)	other	0.02284	0.97716	other
CL2001032632AA	other	0.00381	0.99619	other
CL2001032638AA	other	0.01782	0.98218	other
CL2001032640AA (testset)	other	0.02738	0.97262	other
CL2001032643AA	other	0.02262	0.97738	other
CL2001032644AA (testset)	other	0.0161	0.9839	other
CL2001032647AA	other	0.08226	0.91774	other
CL2001032701AA	other	0.00918	0.99082	other
CL2001032702AA	other	0.12235	0.87765	other
CL2001032703AA	other	0.01994	0.98006	other
CL2001032704AA	other	0.09214	0.90786	other
CL2001032706AA (testset)	other	0.05752	0.94248	other
CL2001032709AA	other	0.01813	0.98187	other
CL2001032716AA	other	0.03442	0.96558	other
CL2001032717AA	other	0.01882	0.98118	other
CL2001032718AA (testset)	NORMAL	0.75102	0.24898	NORMAL
CL2001032719AA	other	0.017	0.983	other
CL2001032720AA	other	0.00381	0.99619	other
CL2001032722AA	other	0.03079	0.96921	other
CL2001032724AA	NORMAL	0.18324	0.81676	other
CL2001032725AA	NORMAL	0.57103	0.42897	NORMAL
CL2001032727AA	NORMAL	0.6358	0.3642	NORMAL
CL2001032729AA	other	0.00536	0.99464	other
CL2001032730AA (testset)	other	0.00434	0.99566	other
CL2001032732AA (testset)	other	0.00446	0.99554	other
CL2001032733AA	other	0.0127	0.9873	other
CL2001032738AA (testset)	other	0.0175	0.9825	other
CL2001032742AA (testset)	other	0.00345	0.99655	other
CL2001032746AA	other	0.03373	0.96627	other
CL2001032747AA	other	0.01405	0.98595	other
CL2001032833AA	other	0.02943	0.97057	other
CL2001032836AA (testset)	other	0.00471	0.99529	other
CL2001032838AA (testset)	other	0.05029	0.94971	other
CL2001032839AA	other	0.01132	0.98868	other
CL2001032841AA	other	0.03173	0.96827	other
CL2001032842AA	other	0.00267	0.99733	other
CL2001032843AA (testset)	other	0.01805	0.98195	other
CL2001032845AA (testset)	other	0.033	0.967	other
CL2001032846AA	other	0.17297	0.82703	other
CL2001032847AA	other	0.09462	0.90538	other
CL2001032848AA	other	0.75697	0.24303	NORMAL
CL2001032850AA	other	0.03176	0.96824	other
CL2001032853AA	other	0.00795	0.99205	other
CL2001032854AA (testset)	other	0.0153	0.9847	other
CL2001032856AA	other	0.01411	0.98589	other
CL2001032857AA	other	0.02871	0.97129	other
CL2001032860AA (testset)	other	0.05545	0.94455	other
CL2001040305AA	other	0.00826	0.99174	other
CL2001040306AA	other	0.01816	0.98184	other
CL2001041708AA	other	0.00974	0.99026	other
CL2001041711AA	other	0.04251	0.95749	other
CL2001041716AA	other	0.12332	0.87668	other
CL2001042501AA (testset)	other	0.0128	0.9872	other
CL2001042505AA	other	0.0107	0.9893	other
CL2001042506AA (testset)	other	0.06553	0.93447	other