GO:0006814

GO:0006814

sodium ion transport (annotated genes)

Biological Process

Parent nodes

GO:0015672	monovalent inorganic cation transport
GO:0030001	metal ion transport

This leaf node contains 53 genes

The following 53 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
39356_at	NEDD4L	neural precursor cell expressed, developmentally down-regulated 4-like	1.1833	-0.105
39682_at	SCNN1B	sodium channel, nonvoltage-gated 1, beta (Liddle syndrome)	0.6435	-0.0571
32563_at	ATP1B3	ATPase, Na+/K+ transporting, beta 3 polypeptide	0.5754	-0.051
35256_at	SLC5A6	solute carrier family 5 (sodium-dependent vitamin transporter), member 6	-0.5231	0.0464
34520_at	HCN2	hyperpolarization activated cyclic nucleotide-gated potassium channel 2	-0.5213	0.0462
34462_at	SCNN1D	sodium channel, nonvoltage-gated 1, delta	-0.4336	0.0385
32681_at	SLC9A1	solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive)	0.4269	-0.0379
33545_at	SCN4A	sodium channel, voltage-gated, type IV, alpha	-0.3808	0.0338
32981_at	SLC9A3	solute carrier family 9 (sodium/hydrogen exchanger), isoform 3	-0.3322	0.0295
34208_at	SLC12A5	solute carrier family 12, (potassium-chloride transporter) member 5	-0.3129	0.0278
35510_at	SCN8A	sodium channel, voltage gated, type VIII, alpha	-0.3088	0.0274
34436_at	SLC17A3	solute carrier family 17 (sodium phosphate), member 3	0.295	-0.0262
973_at	SGK	serum/glucocorticoid regulated kinase	0.2934	-0.026
40954_at	FXYD2	FXYD domain containing ion transport regulator 2	-0.2819	0.025
32459_at	SLC5A5	solute carrier family 5 (sodium iodide symporter), member 5	-0.2816	0.025
31559_at	SLC13A2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	-0.2593	0.023
35670_at	ATP1A3	ATPase, Na+/K+ transporting, alpha 3 polypeptide	-0.2548	0.0226
41079_at	ACCN3	amiloride-sensitive cation channel 3	-0.2497	0.0222
36725_at	SCN2A2	sodium channel, voltage-gated, type II, alpha 2	-0.2428	0.0215
34035_at	SLC10A1	solute carrier family 10 (sodium/bile acid cotransporter family), member 1	-0.2115	0.0188
34377_at	ATP1A2	ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide	0.2107	-0.0187
32439_at	ATP4B	ATPase, H+/K+ exchanging, beta polypeptide	-0.2037	0.0181
37270_at	ATP1B2	ATPase, Na+/K+ transporting, beta 2 polypeptide	0.2014	-0.0179
33010_at	SLC5A4	solute carrier family 5 (low affinity glucose cotransporter), member 4	-0.1983	0.0176
40247_at	SLC9A7	solute carrier family 9 (sodium/hydrogen exchanger), isoform 7	-0.1876	0.0166
36205_at	NDUFA9	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa	-0.1808	0.016
34915_at	SLC8A1	solute carrier family 8 (sodium/calcium exchanger), member 1	0.178	-0.0158
35207_at	SCNN1A	sodium channel, nonvoltage-gated 1 alpha	-0.1696	0.015
38516_at	SCN1B	sodium channel, voltage-gated, type I, beta	-0.1637	0.0145
41305_at	SLC5A2	solute carrier family 5 (sodium/glucose cotransporter), member 2	-0.1621	0.0144
31328_at	SLC34A1	solute carrier family 34 (sodium phosphate), member 1	0.1557	-0.0138
32225_at	ATP1A1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.151	-0.0134
36542_at	SLC9A6	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6	0.1292	-0.0115
32920_at	HCN4	hyperpolarization activated cyclic nucleotide-gated potassium channel 4	-0.1252	0.0111
35906_at	SLC5A1	solute carrier family 5 (sodium/glucose cotransporter), member 1	-0.1101	0.0098
39498_at	FXYD2	FXYD domain containing ion transport regulator 2	-0.1099	0.0098
34918_at	SCN2B	sodium channel, voltage-gated, type II, beta	-0.1031	0.0091
34118_at	ATP1B2	ATPase, Na+/K+ transporting, beta 2 polypeptide	0.0984	-0.0087
38122_at	SLC23A2	solute carrier family 23 (nucleobase transporters), member 2	0.0983	-0.0087
37423_at	SLC12A2	solute carrier family 12 (sodium/potassium/chloride transporters), member 2	-0.0929	0.0082
32373_at	SLC17A2	solute carrier family 17 (sodium phosphate), member 2	-0.0773	0.0069
31490_at	SCN5A	sodium channel, voltage-gated, type V, alpha (long QT syndrome 3)	0.0609	-0.0054
37953_s_at	ACCN2	amiloride-sensitive cation channel 2, neuronal	0.0606	-0.0054
38303_at	TMEM1	transmembrane protein 1	0.0543	-0.0048
34516_at	SLC12A1	solute carrier family 12 (sodium/potassium/chloride transporters), member 1	0.0503	-0.0045
35904_at	SLC10A2	solute carrier family 10 (sodium/bile acid cotransporter family), member 2	0.0496	-0.0044
40812_at	SLC5A3	solute carrier family 5 (inositol transporters), member 3	-0.0414	0.0037
40317_at	ACCN1	amiloride-sensitive cation channel 1, neuronal (degenerin)	-0.0413	0.0037
33497_at	SCNN1G	sodium channel, nonvoltage-gated 1, gamma	-0.0392	0.0035
36331_at	TMEM1	transmembrane protein 1	0.0365	-0.0032
35525_at	SLC17A4	solute carrier family 17 (sodium phosphate), member 4	0.019	-0.0017
41368_at	SLC13A3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.0061	-5e-04
40360_at	SLC10A3	solute carrier family 10 (sodium/bile acid cotransporter family), member 3	-0.0033	3e-04

Performance on training data

• Error rate: 0.04444
• Performance: 0.18023
• Redundancy: 3.44653

	Sensitivity	Specificity
NORMAL	0.45455	1
other	1	0.45455

Performance on test data

• Error rate: 0.04412
• Performance: 0.31297
• Redundancy: 3.2567

	Sensitivity	Specificity
NORMAL	0.5	1
other	1	0.5

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.00997	0.99003	other
CL2001031607AA	other	0.02294	0.97706	other
CL2001031608AA	other	0.02325	0.97675	other
CL2001031609AA	other	0.00078	0.99922	other
CL2001031611AA	other	0.04789	0.95211	other
CL2001031612AA	other	0.0142	0.9858	other
CL2001031613AA	other	0.18462	0.81538	other
CL2001031615AA	other	0.00088	0.99912	other
CL2001031616AA (testset)	other	0.00354	0.99646	other
CL2001031618AA	other	0.00099	0.99901	other
CL2001031620AA (testset)	other	0.02543	0.97457	other
CL2001031621AA (testset)	other	0.25031	0.74969	other
CL2001031622AA	other	0.054	0.946	other
CL2001031625AA	other	0.02985	0.97015	other
CL2001031627AA (testset)	other	0.00231	0.99769	other
CL2001031628AA (testset)	other	0.00305	0.99695	other
CL2001031629AA	other	0.00913	0.99087	other
CL2001031630AA (testset)	other	0.0019	0.9981	other
CL2001031631AA	other	0.00605	0.99395	other
CL2001031632AA	other	0.004	0.996	other
CL2001031634AA	other	0.00011	0.99989	other
CL2001031635AA	other	0.00098	0.99902	other
CL2001031636AA	other	0.00897	0.99103	other
CL2001032002AA	other	0.01492	0.98508	other
CL2001032005AA	other	9e-05	0.99991	other
CL2001032008AA	other	0.00377	0.99623	other
CL2001032009AA (testset)	other	0.00591	0.99409	other
CL2001032010AA (testset)	NORMAL	0.16394	0.83606	other
CL2001032011AA (testset)	other	0.09985	0.90015	other
CL2001032012AA (testset)	other	0.14935	0.85065	other
CL2001032013AA (testset)	other	0.07176	0.92824	other
CL2001032015AA	other	0.01002	0.98998	other
CL2001032016AA (testset)	other	0.00195	0.99805	other
CL2001032019AA	other	0.00217	0.99783	other
CL2001032020AA (testset)	other	0.00241	0.99759	other
CL2001032025AA	other	0.00368	0.99632	other
CL2001032026AA	other	0.02668	0.97332	other
CL2001032027AA	other	0.00627	0.99373	other
CL2001032030AA	other	0.00121	0.99879	other
CL2001032031AA (testset)	other	0.06492	0.93508	other
CL2001032032AA	other	0.04145	0.95855	other
CL2001032034AA	other	0.40548	0.59452	other
CL2001032036AA	other	0.01859	0.98141	other
CL2001032041AA	NORMAL	0.45004	0.54996	other
CL2001032043AA	NORMAL	0.86613	0.13387	NORMAL
CL2001032044AA	other	1e-04	0.9999	other
CL2001032045AA (testset)	NORMAL	0.27739	0.72261	other
CL2001032046AA	NORMAL	0.76315	0.23685	NORMAL
CL2001032101AA	other	0.00053	0.99947	other
CL2001032102AA	NORMAL	0.95209	0.04791	NORMAL
CL2001032103AA	other	0.0186	0.9814	other
CL2001032104AA	other	0.00206	0.99794	other
CL2001032105AA	other	7e-05	0.99993	other
CL2001032107AA	other	0.00192	0.99808	other
CL2001032108AA	other	0.00304	0.99696	other
CL2001032109AA (testset)	other	0.25818	0.74182	other
CL2001032110AA	other	0.01643	0.98357	other
CL2001032111AA	other	0.00871	0.99129	other
CL2001032113AA (testset)	other	0.00259	0.99741	other
CL2001032114AA	other	0.00409	0.99591	other
CL2001032115AA (testset)	other	0.005	0.995	other
CL2001032116AA (testset)	other	0.27242	0.72758	other
CL2001032117AA	other	0.21585	0.78415	other
CL2001032121AA	other	0.00025	0.99975	other
CL2001032122AA	other	0.09532	0.90468	other
CL2001032124AA	other	0.00018	0.99982	other
CL2001032125AA	other	0.00013	0.99987	other
CL2001032127AA (testset)	other	9e-05	0.99991	other
CL2001032128AA (testset)	NORMAL	0.80963	0.19037	NORMAL
CL2001032129AA (testset)	other	0.0464	0.9536	other
CL2001032130AA	other	0.00133	0.99867	other
CL2001032132AA	other	0.01683	0.98317	other
CL2001032134AA (testset)	other	0.18184	0.81816	other
CL2001032135AA	other	0.47955	0.52045	other
CL2001032136AA (testset)	other	0.01361	0.98639	other
CL2001032138AA (testset)	other	0.00824	0.99176	other
CL2001032141AA (testset)	other	0.00756	0.99244	other
CL2001032142AA	other	0.01674	0.98326	other
CL2001032144AA	other	0.05691	0.94309	other
CL2001032145AA	other	0.01564	0.98436	other
CL2001032147AA	NORMAL	0.76868	0.23132	NORMAL
CL2001032149AA (testset)	other	0.05527	0.94473	other
CL2001032151AA	other	0.00249	0.99751	other
CL2001032152AA	other	0.00092	0.99908	other
CL2001032153AA	other	0.03177	0.96823	other
CL2001032155AA	other	0.30701	0.69299	other
CL2001032156AA (testset)	other	0.02784	0.97216	other
CL2001032202AA (testset)	NORMAL	0.60235	0.39765	NORMAL
CL2001032206AA	NORMAL	0.36326	0.63674	other
CL2001032207AA	other	0.0174	0.9826	other
CL2001032209AA	other	0.13177	0.86823	other
CL2001032210AA	other	0.002	0.998	other
CL2001032211AA (testset)	other	0.00812	0.99188	other
CL2001032212AA	other	0.00246	0.99754	other
CL2001032213AA	other	0.00303	0.99697	other
CL2001032214AA (testset)	other	0.42851	0.57149	other
CL2001032217AA (testset)	other	0.00071	0.99929	other
CL2001032218AA	other	0.01013	0.98987	other
CL2001032219AA (testset)	other	0.00922	0.99078	other
CL2001032220AA	NORMAL	0.33761	0.66239	other
CL2001032222AA (testset)	other	0.0306	0.9694	other
CL2001032229AA (testset)	other	0.00245	0.99755	other
CL2001032231AA	other	0.0087	0.9913	other
CL2001032232AA	other	0.04003	0.95997	other
CL2001032233AA (testset)	other	0.00081	0.99919	other
CL2001032238AA	other	0.00534	0.99466	other
CL2001032239AA	other	0.01614	0.98386	other
CL2001032240AA	other	0.04711	0.95289	other
CL2001032241AA (testset)	other	0.00616	0.99384	other
CL2001032242AA	other	0.0024	0.9976	other
CL2001032243AA	other	0.00561	0.99439	other
CL2001032248AA	other	0.00047	0.99953	other
CL2001032249AA (testset)	other	0.01146	0.98854	other
CL2001032252AA (testset)	other	0.00368	0.99632	other
CL2001032254AA (testset)	other	0.00056	0.99944	other
CL2001032255AA	other	5e-04	0.9995	other
CL2001032256AA (testset)	NORMAL	0.01858	0.98142	other
CL2001032259AA (testset)	other	0.07737	0.92263	other
CL2001032260AA	other	0.00236	0.99764	other
CL2001032301AA	other	0.02776	0.97224	other
CL2001032304AA	NORMAL	0.27535	0.72465	other
CL2001032305AA (testset)	other	0.00504	0.99496	other
CL2001032306AA (testset)	other	0.0139	0.9861	other
CL2001032307AA (testset)	other	0.26774	0.73226	other
CL2001032308AA	other	0.00118	0.99882	other
CL2001032309AA	other	0.00426	0.99574	other
CL2001032310AA	other	0.00356	0.99644	other
CL2001032311AA (testset)	other	0.00831	0.99169	other
CL2001032312AA	other	0.00686	0.99314	other
CL2001032313AA (testset)	other	0.00132	0.99868	other
CL2001032314AA (testset)	other	0.00042	0.99958	other
CL2001032316AA	other	0.00191	0.99809	other
CL2001032601AA	other	0.00166	0.99834	other
CL2001032602AA	other	0.0349	0.9651	other
CL2001032604AA	other	0.02442	0.97558	other
CL2001032607AA	other	0.00047	0.99953	other
CL2001032608AA	other	0.04807	0.95193	other
CL2001032610AA	other	0.00477	0.99523	other
CL2001032612AA	other	0.00118	0.99882	other
CL2001032613AA (testset)	other	0.0013	0.9987	other
CL2001032614AA	other	0.00543	0.99457	other
CL2001032616AA	other	0.00649	0.99351	other
CL2001032617AA (testset)	other	0.00834	0.99166	other
CL2001032620AA (testset)	other	0.00475	0.99525	other
CL2001032625AA	other	0.00024	0.99976	other
CL2001032627AA	other	0.08167	0.91833	other
CL2001032628AA	other	0.00148	0.99852	other
CL2001032629AA	other	8e-04	0.9992	other
CL2001032630AA (testset)	other	2e-04	0.9998	other
CL2001032632AA	other	0.00142	0.99858	other
CL2001032638AA	other	0.00267	0.99733	other
CL2001032640AA (testset)	other	0.2156	0.7844	other
CL2001032643AA	other	0.00104	0.99896	other
CL2001032644AA (testset)	other	0.04745	0.95255	other
CL2001032647AA	other	0.00407	0.99593	other
CL2001032701AA	other	0.03654	0.96346	other
CL2001032702AA	other	0.26563	0.73437	other
CL2001032703AA	other	0.00636	0.99364	other
CL2001032704AA	other	0.0343	0.9657	other
CL2001032706AA (testset)	other	0.03782	0.96218	other
CL2001032709AA	other	0.00288	0.99712	other
CL2001032716AA	other	0.01037	0.98963	other
CL2001032717AA	other	0.00073	0.99927	other
CL2001032718AA (testset)	NORMAL	0.84447	0.15553	NORMAL
CL2001032719AA	other	0.06068	0.93932	other
CL2001032720AA	other	0.00746	0.99254	other
CL2001032722AA	other	0.00183	0.99817	other
CL2001032724AA	NORMAL	0.14112	0.85888	other
CL2001032725AA	NORMAL	0.47298	0.52702	other
CL2001032727AA	NORMAL	0.69085	0.30915	NORMAL
CL2001032729AA	other	0.00919	0.99081	other
CL2001032730AA (testset)	other	0.00173	0.99827	other
CL2001032732AA (testset)	other	0.0289	0.9711	other
CL2001032733AA	other	0.00894	0.99106	other
CL2001032738AA (testset)	other	0.00112	0.99888	other
CL2001032742AA (testset)	other	0.00103	0.99897	other
CL2001032746AA	other	0.00209	0.99791	other
CL2001032747AA	other	0.002	0.998	other
CL2001032833AA	other	0.00362	0.99638	other
CL2001032836AA (testset)	other	0.00592	0.99408	other
CL2001032838AA (testset)	other	0.05019	0.94981	other
CL2001032839AA	other	0.00594	0.99406	other
CL2001032841AA	other	0.00832	0.99168	other
CL2001032842AA	other	0.00248	0.99752	other
CL2001032843AA (testset)	other	0.01406	0.98594	other
CL2001032845AA (testset)	other	0.0078	0.9922	other
CL2001032846AA	other	0.01801	0.98199	other
CL2001032847AA	other	0.00642	0.99358	other
CL2001032848AA	other	0.21006	0.78994	other
CL2001032850AA	other	0.00023	0.99977	other
CL2001032853AA	other	0.00676	0.99324	other
CL2001032854AA (testset)	other	0.00092	0.99908	other
CL2001032856AA	other	0.00093	0.99907	other
CL2001032857AA	other	0.05559	0.94441	other
CL2001032860AA (testset)	other	0.00036	0.99964	other
CL2001040305AA	other	0.00014	0.99986	other
CL2001040306AA	other	0.00237	0.99763	other
CL2001041708AA	other	0.00209	0.99791	other
CL2001041711AA	other	0.00079	0.99921	other
CL2001041716AA	other	0.08725	0.91275	other
CL2001042501AA (testset)	other	2e-04	0.9998	other
CL2001042505AA	other	0.00048	0.99952	other
CL2001042506AA (testset)	other	0.01809	0.98191	other