GO:0006397

GO:0006397

mRNA processing (annotated genes)

Biological Process

Parent node

GO:0006397	mRNA processing

This leaf node contains 27 genes

The following 20 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
38748_at	ADARB1	adenosine deaminase, RNA-specific, B1 (RED1 homolog rat)	1.3332	-0.1183
35302_at	NXF1	nuclear RNA export factor 1	0.4787	-0.0425
32790_at	NCBP2	nuclear cap binding protein subunit 2, 20kDa	-0.4517	0.0401
39423_f_at	SPOP	speckle-type POZ protein	0.376	-0.0334
34717_s_at	FUSIP1	FUS interacting protein (serine-arginine rich) 1	-0.2667	0.0237
39142_at	CPSF5	cleavage and polyadenylation specific factor 5, 25 kDa	-0.2442	0.0217
35600_at	ROD1	ROD1 regulator of differentiation 1 (S. pombe)	-0.1833	0.0163
32789_at	NCBP2	nuclear cap binding protein subunit 2, 20kDa	-0.1801	0.016
34716_at	FUSIP1	FUS interacting protein (serine-arginine rich) 1	-0.1693	0.015
41283_at	HNRPH3	heterogeneous nuclear ribonucleoprotein H3 (2H9)	0.1299	-0.0115
35753_at	PRPF8	PRP8 pre-mRNA processing factor 8 homolog (yeast)	0.115	-0.0102
37987_at	NCBP1	nuclear cap binding protein subunit 1, 80kDa	-0.0917	0.0081
34683_at	CUGBP1	CUG triplet repeat, RNA binding protein 1	-0.0788	0.007
35201_at	HNRPL	heterogeneous nuclear ribonucleoprotein L	0.0622	-0.0055
39792_at	HNRPR	heterogeneous nuclear ribonucleoprotein R	-0.0579	0.0051
41737_at	SRRM1	serine/arginine repetitive matrix 1	0.041	-0.0036
37334_at	HNRPA0	heterogeneous nuclear ribonucleoprotein A0	0.0381	-0.0034
33207_at	CUGBP1	CUG triplet repeat, RNA binding protein 1	0.0244	-0.0022
35743_at	CPSF4	cleavage and polyadenylation specific factor 4, 30kDa	-0.0106	9e-04
40875_s_at	SNRP70	small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)	0.0061	-5e-04

Performance on training data

• Error rate: 0.05926
• Performance: 0.22989
• Redundancy: 3.09877

	Sensitivity	Specificity
NORMAL	0.36364	0.99194
other	0.99194	0.36364

Performance on test data

• Error rate: 0.04412
• Performance: 0.30751
• Redundancy: 3.08512

	Sensitivity	Specificity
NORMAL	0.5	1
other	1	0.5

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.05865	0.94135	other
CL2001031607AA	other	0.01278	0.98722	other
CL2001031608AA	other	0.03629	0.96371	other
CL2001031609AA	other	0.02198	0.97802	other
CL2001031611AA	other	0.02533	0.97467	other
CL2001031612AA	other	0.00903	0.99097	other
CL2001031613AA	other	0.10325	0.89675	other
CL2001031615AA	other	0.00497	0.99503	other
CL2001031616AA (testset)	other	0.01662	0.98338	other
CL2001031618AA	other	0.0105	0.9895	other
CL2001031620AA (testset)	other	0.00433	0.99567	other
CL2001031621AA (testset)	other	0.00328	0.99672	other
CL2001031622AA	other	0.01627	0.98373	other
CL2001031625AA	other	0.0375	0.9625	other
CL2001031627AA (testset)	other	0.01843	0.98157	other
CL2001031628AA (testset)	other	0.01154	0.98846	other
CL2001031629AA	other	0.00798	0.99202	other
CL2001031630AA (testset)	other	0.01473	0.98527	other
CL2001031631AA	other	0.00385	0.99615	other
CL2001031632AA	other	0.02735	0.97265	other
CL2001031634AA	other	0.01272	0.98728	other
CL2001031635AA	other	0.02139	0.97861	other
CL2001031636AA	other	0.00672	0.99328	other
CL2001032002AA	other	0.01113	0.98887	other
CL2001032005AA	other	0.00626	0.99374	other
CL2001032008AA	other	0.01913	0.98087	other
CL2001032009AA (testset)	other	0.01047	0.98953	other
CL2001032010AA (testset)	NORMAL	0.05012	0.94988	other
CL2001032011AA (testset)	other	0.015	0.985	other
CL2001032012AA (testset)	other	0.00909	0.99091	other
CL2001032013AA (testset)	other	0.22302	0.77698	other
CL2001032015AA	other	0.63628	0.36372	NORMAL
CL2001032016AA (testset)	other	0.02335	0.97665	other
CL2001032019AA	other	0.02331	0.97669	other
CL2001032020AA (testset)	other	0.01345	0.98655	other
CL2001032025AA	other	0.01882	0.98118	other
CL2001032026AA	other	0.01357	0.98643	other
CL2001032027AA	other	0.02951	0.97049	other
CL2001032030AA	other	0.00764	0.99236	other
CL2001032031AA (testset)	other	0.03055	0.96945	other
CL2001032032AA	other	0.01932	0.98068	other
CL2001032034AA	other	0.14448	0.85552	other
CL2001032036AA	other	0.021	0.979	other
CL2001032041AA	NORMAL	0.44121	0.55879	other
CL2001032043AA	NORMAL	0.64134	0.35866	NORMAL
CL2001032044AA	other	0.00677	0.99323	other
CL2001032045AA (testset)	NORMAL	0.18278	0.81722	other
CL2001032046AA	NORMAL	0.34379	0.65621	other
CL2001032101AA	other	0.0633	0.9367	other
CL2001032102AA	NORMAL	0.29212	0.70788	other
CL2001032103AA	other	0.15339	0.84661	other
CL2001032104AA	other	0.0311	0.9689	other
CL2001032105AA	other	0.00271	0.99729	other
CL2001032107AA	other	0.02142	0.97858	other
CL2001032108AA	other	0.02214	0.97786	other
CL2001032109AA (testset)	other	0.03337	0.96663	other
CL2001032110AA	other	0.03569	0.96431	other
CL2001032111AA	other	0.02527	0.97473	other
CL2001032113AA (testset)	other	0.00539	0.99461	other
CL2001032114AA	other	0.04858	0.95142	other
CL2001032115AA (testset)	other	0.00689	0.99311	other
CL2001032116AA (testset)	other	0.02804	0.97196	other
CL2001032117AA	other	0.00607	0.99393	other
CL2001032121AA	other	0.0139	0.9861	other
CL2001032122AA	other	0.00252	0.99748	other
CL2001032124AA	other	0.01948	0.98052	other
CL2001032125AA	other	0.00527	0.99473	other
CL2001032127AA (testset)	other	0.03769	0.96231	other
CL2001032128AA (testset)	NORMAL	0.67222	0.32778	NORMAL
CL2001032129AA (testset)	other	0.00751	0.99249	other
CL2001032130AA	other	0.00847	0.99153	other
CL2001032132AA	other	0.011	0.989	other
CL2001032134AA (testset)	other	0.02394	0.97606	other
CL2001032135AA	other	0.01494	0.98506	other
CL2001032136AA (testset)	other	0.01993	0.98007	other
CL2001032138AA (testset)	other	0.00736	0.99264	other
CL2001032141AA (testset)	other	0.01416	0.98584	other
CL2001032142AA	other	0.00689	0.99311	other
CL2001032144AA	other	0.0244	0.9756	other
CL2001032145AA	other	0.05478	0.94522	other
CL2001032147AA	NORMAL	0.41942	0.58058	other
CL2001032149AA (testset)	other	0.05778	0.94222	other
CL2001032151AA	other	0.01623	0.98377	other
CL2001032152AA	other	0.0277	0.9723	other
CL2001032153AA	other	0.0153	0.9847	other
CL2001032155AA	other	0.12545	0.87455	other
CL2001032156AA (testset)	other	0.08267	0.91733	other
CL2001032202AA (testset)	NORMAL	0.51141	0.48859	NORMAL
CL2001032206AA	NORMAL	0.58511	0.41489	NORMAL
CL2001032207AA	other	0.00462	0.99538	other
CL2001032209AA	other	0.00185	0.99815	other
CL2001032210AA	other	0.01383	0.98617	other
CL2001032211AA (testset)	other	0.00597	0.99403	other
CL2001032212AA	other	0.01506	0.98494	other
CL2001032213AA	other	0.26924	0.73076	other
CL2001032214AA (testset)	other	0.15952	0.84048	other
CL2001032217AA (testset)	other	0.00932	0.99068	other
CL2001032218AA	other	0.00574	0.99426	other
CL2001032219AA (testset)	other	0.06593	0.93407	other
CL2001032220AA	NORMAL	0.612	0.388	NORMAL
CL2001032222AA (testset)	other	0.00756	0.99244	other
CL2001032229AA (testset)	other	0.01227	0.98773	other
CL2001032231AA	other	0.02613	0.97387	other
CL2001032232AA	other	0.01585	0.98415	other
CL2001032233AA (testset)	other	0.01994	0.98006	other
CL2001032238AA	other	0.02349	0.97651	other
CL2001032239AA	other	0.01116	0.98884	other
CL2001032240AA	other	0.04586	0.95414	other
CL2001032241AA (testset)	other	0.01716	0.98284	other
CL2001032242AA	other	0.02462	0.97538	other
CL2001032243AA	other	0.02383	0.97617	other
CL2001032248AA	other	0.00311	0.99689	other
CL2001032249AA (testset)	other	0.01077	0.98923	other
CL2001032252AA (testset)	other	0.01186	0.98814	other
CL2001032254AA (testset)	other	0.01748	0.98252	other
CL2001032255AA	other	0.06718	0.93282	other
CL2001032256AA (testset)	NORMAL	0.0479	0.9521	other
CL2001032259AA (testset)	other	0.07751	0.92249	other
CL2001032260AA	other	0.05076	0.94924	other
CL2001032301AA	other	0.01779	0.98221	other
CL2001032304AA	NORMAL	0.23117	0.76883	other
CL2001032305AA (testset)	other	0.03346	0.96654	other
CL2001032306AA (testset)	other	0.01284	0.98716	other
CL2001032307AA (testset)	other	0.07578	0.92422	other
CL2001032308AA	other	0.01323	0.98677	other
CL2001032309AA	other	0.00787	0.99213	other
CL2001032310AA	other	0.00493	0.99507	other
CL2001032311AA (testset)	other	0.009	0.991	other
CL2001032312AA	other	0.00865	0.99135	other
CL2001032313AA (testset)	other	0.04912	0.95088	other
CL2001032314AA (testset)	other	0.01376	0.98624	other
CL2001032316AA	other	0.0056	0.9944	other
CL2001032601AA	other	0.00919	0.99081	other
CL2001032602AA	other	0.00772	0.99228	other
CL2001032604AA	other	0.01066	0.98934	other
CL2001032607AA	other	0.02515	0.97485	other
CL2001032608AA	other	0.00425	0.99575	other
CL2001032610AA	other	0.00476	0.99524	other
CL2001032612AA	other	0.00503	0.99497	other
CL2001032613AA (testset)	other	0.00781	0.99219	other
CL2001032614AA	other	0.02705	0.97295	other
CL2001032616AA	other	0.01388	0.98612	other
CL2001032617AA (testset)	other	0.01853	0.98147	other
CL2001032620AA (testset)	other	0.02504	0.97496	other
CL2001032625AA	other	0.01677	0.98323	other
CL2001032627AA	other	0.00938	0.99062	other
CL2001032628AA	other	0.00753	0.99247	other
CL2001032629AA	other	0.01123	0.98877	other
CL2001032630AA (testset)	other	0.01356	0.98644	other
CL2001032632AA	other	0.00276	0.99724	other
CL2001032638AA	other	0.01515	0.98485	other
CL2001032640AA (testset)	other	0.02309	0.97691	other
CL2001032643AA	other	0.04647	0.95353	other
CL2001032644AA (testset)	other	0.00841	0.99159	other
CL2001032647AA	other	0.0201	0.9799	other
CL2001032701AA	other	0.01146	0.98854	other
CL2001032702AA	other	0.01979	0.98021	other
CL2001032703AA	other	0.00843	0.99157	other
CL2001032704AA	other	0.04274	0.95726	other
CL2001032706AA (testset)	other	0.01612	0.98388	other
CL2001032709AA	other	0.11693	0.88307	other
CL2001032716AA	other	0.04562	0.95438	other
CL2001032717AA	other	0.01029	0.98971	other
CL2001032718AA (testset)	NORMAL	0.57181	0.42819	NORMAL
CL2001032719AA	other	0.01154	0.98846	other
CL2001032720AA	other	0.00498	0.99502	other
CL2001032722AA	other	0.0218	0.9782	other
CL2001032724AA	NORMAL	0.14926	0.85074	other
CL2001032725AA	NORMAL	0.59913	0.40087	NORMAL
CL2001032727AA	NORMAL	0.25059	0.74941	other
CL2001032729AA	other	0.00372	0.99628	other
CL2001032730AA (testset)	other	0.01361	0.98639	other
CL2001032732AA (testset)	other	0.00714	0.99286	other
CL2001032733AA	other	0.02742	0.97258	other
CL2001032738AA (testset)	other	0.00539	0.99461	other
CL2001032742AA (testset)	other	0.00511	0.99489	other
CL2001032746AA	other	0.02869	0.97131	other
CL2001032747AA	other	0.03156	0.96844	other
CL2001032833AA	other	0.02855	0.97145	other
CL2001032836AA (testset)	other	0.00813	0.99187	other
CL2001032838AA (testset)	other	0.08674	0.91326	other
CL2001032839AA	other	0.01787	0.98213	other
CL2001032841AA	other	0.03067	0.96933	other
CL2001032842AA	other	0.00677	0.99323	other
CL2001032843AA (testset)	other	0.0102	0.9898	other
CL2001032845AA (testset)	other	0.06549	0.93451	other
CL2001032846AA	other	0.01496	0.98504	other
CL2001032847AA	other	0.04854	0.95146	other
CL2001032848AA	other	0.29839	0.70161	other
CL2001032850AA	other	0.02402	0.97598	other
CL2001032853AA	other	0.08919	0.91081	other
CL2001032854AA (testset)	other	0.01794	0.98206	other
CL2001032856AA	other	0.0996	0.9004	other
CL2001032857AA	other	0.01302	0.98698	other
CL2001032860AA (testset)	other	0.02111	0.97889	other
CL2001040305AA	other	0.00174	0.99826	other
CL2001040306AA	other	0.01404	0.98596	other
CL2001041708AA	other	0.01068	0.98932	other
CL2001041711AA	other	0.02427	0.97573	other
CL2001041716AA	other	0.09166	0.90834	other
CL2001042501AA (testset)	other	0.0138	0.9862	other
CL2001042505AA	other	0.00442	0.99558	other
CL2001042506AA (testset)	other	0.03231	0.96769	other