GO:0006366

GO:0006366

transcription from Pol II promoter (annotated genes)

Biological Process

Parent node

GO:0006366	transcription from Pol II promoter

This leaf node contains 222 genes

The following 17 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
37194_at	GATA2	GATA binding protein 2	0.9457	-0.0839
1052_s_at	CEBPD	CCAAT/enhancer binding protein (C/EBP), delta	0.4371	-0.0388
34740_at	FOXO3A	forkhead box O3A	0.3268	-0.029
203_at	GATA2	GATA binding protein 2	0.2909	-0.0258
1072_g_at	GATA2	GATA binding protein 2	0.268	-0.0238
37544_at	NFIL3	nuclear factor, interleukin 3 regulated	0.2415	-0.0214
41747_s_at	MEF2A	MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)	0.2356	-0.0209
38230_at	EPAS1	endothelial PAS domain protein 1	0.2002	-0.0178
35146_at	TGFB1I1	transforming growth factor beta 1 induced transcript 1	0.172	-0.0153
36319_at	FOXF2	forkhead box F2	0.1593	-0.0141
599_at	HLX1	H2.0-like homeo box 1 (Drosophila)	0.0839	-0.0074
39143_at	NFATC1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.0825	-0.0073
38354_at	CEBPB	CCAAT/enhancer binding protein (C/EBP), beta	0.0566	-0.005
440_at	NFIC	nuclear factor I/C (CCAAT-binding transcription factor)	0.0515	-0.0046
670_s_at	CREB5	cAMP responsive element binding protein 5	0.0361	-0.0032
39032_at	TSC22	transforming growth factor beta-stimulated protein TSC-22	0.0123	-0.0011
1854_at	MYBL2	v-myb myeloblastosis viral oncogene homolog (avian)-like 2	-0.0026	2e-04

Performance on training data

• Error rate: 0.02222
• Performance: 0.19497
• Redundancy: 2.91199

	Sensitivity	Specificity
NORMAL	0.81818	0.99194
other	0.99194	0.81818

Performance on test data

• Error rate: 0.01471
• Performance: 0.16862
• Redundancy: 2.80147

	Sensitivity	Specificity
NORMAL	0.83333	1
other	1	0.83333

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.01569	0.98431	other
CL2001031607AA	other	0.02031	0.97969	other
CL2001031608AA	other	0.04555	0.95445	other
CL2001031609AA	other	0.00279	0.99721	other
CL2001031611AA	other	0.04367	0.95633	other
CL2001031612AA	other	0.04814	0.95186	other
CL2001031613AA	other	0.14835	0.85165	other
CL2001031615AA	other	0.00421	0.99579	other
CL2001031616AA (testset)	other	0.01508	0.98492	other
CL2001031618AA	other	0.0182	0.9818	other
CL2001031620AA (testset)	other	0.00801	0.99199	other
CL2001031621AA (testset)	other	0.01839	0.98161	other
CL2001031622AA	other	0.01251	0.98749	other
CL2001031625AA	other	0.10886	0.89114	other
CL2001031627AA (testset)	other	0.0129	0.9871	other
CL2001031628AA (testset)	other	0.106	0.894	other
CL2001031629AA	other	0.0211	0.9789	other
CL2001031630AA (testset)	other	0.02662	0.97338	other
CL2001031631AA	other	0.00726	0.99274	other
CL2001031632AA	other	0.0169	0.9831	other
CL2001031634AA	other	0.01305	0.98695	other
CL2001031635AA	other	0.0398	0.9602	other
CL2001031636AA	other	0.02269	0.97731	other
CL2001032002AA	other	0.02002	0.97998	other
CL2001032005AA	other	0.00902	0.99098	other
CL2001032008AA	other	0.05587	0.94413	other
CL2001032009AA (testset)	other	0.08744	0.91256	other
CL2001032010AA (testset)	NORMAL	0.50774	0.49226	NORMAL
CL2001032011AA (testset)	other	0.40607	0.59393	other
CL2001032012AA (testset)	other	0.03136	0.96864	other
CL2001032013AA (testset)	other	0.0837	0.9163	other
CL2001032015AA	other	0.40717	0.59283	other
CL2001032016AA (testset)	other	0.04381	0.95619	other
CL2001032019AA	other	0.08114	0.91886	other
CL2001032020AA (testset)	other	0.02707	0.97293	other
CL2001032025AA	other	0.04586	0.95414	other
CL2001032026AA	other	0.02301	0.97699	other
CL2001032027AA	other	0.02609	0.97391	other
CL2001032030AA	other	0.01068	0.98932	other
CL2001032031AA (testset)	other	0.04064	0.95936	other
CL2001032032AA	other	0.1003	0.8997	other
CL2001032034AA	other	0.16714	0.83286	other
CL2001032036AA	other	0.01636	0.98364	other
CL2001032041AA	NORMAL	0.81762	0.18238	NORMAL
CL2001032043AA	NORMAL	0.95722	0.04278	NORMAL
CL2001032044AA	other	0.00575	0.99425	other
CL2001032045AA (testset)	NORMAL	0.48411	0.51589	other
CL2001032046AA	NORMAL	0.64712	0.35288	NORMAL
CL2001032101AA	other	0.12018	0.87982	other
CL2001032102AA	NORMAL	0.95156	0.04844	NORMAL
CL2001032103AA	other	0.02067	0.97933	other
CL2001032104AA	other	0.06663	0.93337	other
CL2001032105AA	other	0.00848	0.99152	other
CL2001032107AA	other	0.01213	0.98787	other
CL2001032108AA	other	0.02597	0.97403	other
CL2001032109AA (testset)	other	0.04525	0.95475	other
CL2001032110AA	other	0.06595	0.93405	other
CL2001032111AA	other	0.07489	0.92511	other
CL2001032113AA (testset)	other	0.0124	0.9876	other
CL2001032114AA	other	0.01137	0.98863	other
CL2001032115AA (testset)	other	0.00399	0.99601	other
CL2001032116AA (testset)	other	0.04338	0.95662	other
CL2001032117AA	other	0.06396	0.93604	other
CL2001032121AA	other	0.01786	0.98214	other
CL2001032122AA	other	0.12233	0.87767	other
CL2001032124AA	other	0.01509	0.98491	other
CL2001032125AA	other	0.01096	0.98904	other
CL2001032127AA (testset)	other	0.08485	0.91515	other
CL2001032128AA (testset)	NORMAL	0.88349	0.11651	NORMAL
CL2001032129AA (testset)	other	0.0083	0.9917	other
CL2001032130AA	other	0.03715	0.96285	other
CL2001032132AA	other	0.06176	0.93824	other
CL2001032134AA (testset)	other	0.07568	0.92432	other
CL2001032135AA	other	0.06026	0.93974	other
CL2001032136AA (testset)	other	0.01775	0.98225	other
CL2001032138AA (testset)	other	0.05001	0.94999	other
CL2001032141AA (testset)	other	0.04616	0.95384	other
CL2001032142AA	other	0.01932	0.98068	other
CL2001032144AA	other	0.03034	0.96966	other
CL2001032145AA	other	0.29828	0.70172	other
CL2001032147AA	NORMAL	0.9048	0.0952	NORMAL
CL2001032149AA (testset)	other	0.12518	0.87482	other
CL2001032151AA	other	0.01002	0.98998	other
CL2001032152AA	other	0.12176	0.87824	other
CL2001032153AA	other	0.0398	0.9602	other
CL2001032155AA	other	0.3996	0.6004	other
CL2001032156AA (testset)	other	0.1066	0.8934	other
CL2001032202AA (testset)	NORMAL	0.93189	0.06811	NORMAL
CL2001032206AA	NORMAL	0.91404	0.08596	NORMAL
CL2001032207AA	other	0.02425	0.97575	other
CL2001032209AA	other	0.01435	0.98565	other
CL2001032210AA	other	0.003	0.997	other
CL2001032211AA (testset)	other	0.11009	0.88991	other
CL2001032212AA	other	0.01326	0.98674	other
CL2001032213AA	other	0.01728	0.98272	other
CL2001032214AA (testset)	other	0.08706	0.91294	other
CL2001032217AA (testset)	other	0.00618	0.99382	other
CL2001032218AA	other	0.01082	0.98918	other
CL2001032219AA (testset)	other	0.00678	0.99322	other
CL2001032220AA	NORMAL	0.57904	0.42096	NORMAL
CL2001032222AA (testset)	other	0.02314	0.97686	other
CL2001032229AA (testset)	other	0.02612	0.97388	other
CL2001032231AA	other	0.08619	0.91381	other
CL2001032232AA	other	0.05379	0.94621	other
CL2001032233AA (testset)	other	0.03946	0.96054	other
CL2001032238AA	other	0.03562	0.96438	other
CL2001032239AA	other	0.02079	0.97921	other
CL2001032240AA	other	0.10502	0.89498	other
CL2001032241AA (testset)	other	0.21129	0.78871	other
CL2001032242AA	other	0.07107	0.92893	other
CL2001032243AA	other	0.07712	0.92288	other
CL2001032248AA	other	0.03209	0.96791	other
CL2001032249AA (testset)	other	0.10211	0.89789	other
CL2001032252AA (testset)	other	0.162	0.838	other
CL2001032254AA (testset)	other	0.04221	0.95779	other
CL2001032255AA	other	0.02291	0.97709	other
CL2001032256AA (testset)	NORMAL	0.88415	0.11585	NORMAL
CL2001032259AA (testset)	other	0.03105	0.96895	other
CL2001032260AA	other	0.01416	0.98584	other
CL2001032301AA	other	0.01978	0.98022	other
CL2001032304AA	NORMAL	0.28942	0.71058	other
CL2001032305AA (testset)	other	0.02951	0.97049	other
CL2001032306AA (testset)	other	0.02513	0.97487	other
CL2001032307AA (testset)	other	0.24495	0.75505	other
CL2001032308AA	other	0.0488	0.9512	other
CL2001032309AA	other	0.01544	0.98456	other
CL2001032310AA	other	0.00385	0.99615	other
CL2001032311AA (testset)	other	0.14127	0.85873	other
CL2001032312AA	other	0.01682	0.98318	other
CL2001032313AA (testset)	other	0.01431	0.98569	other
CL2001032314AA (testset)	other	0.0092	0.9908	other
CL2001032316AA	other	0.04932	0.95068	other
CL2001032601AA	other	0.18746	0.81254	other
CL2001032602AA	other	0.01151	0.98849	other
CL2001032604AA	other	0.02935	0.97065	other
CL2001032607AA	other	0.00469	0.99531	other
CL2001032608AA	other	0.03536	0.96464	other
CL2001032610AA	other	0.00974	0.99026	other
CL2001032612AA	other	0.04477	0.95523	other
CL2001032613AA (testset)	other	0.01013	0.98987	other
CL2001032614AA	other	0.04634	0.95366	other
CL2001032616AA	other	0.0089	0.9911	other
CL2001032617AA (testset)	other	0.01485	0.98515	other
CL2001032620AA (testset)	other	0.019	0.981	other
CL2001032625AA	other	0.01827	0.98173	other
CL2001032627AA	other	0.01298	0.98702	other
CL2001032628AA	other	0.01492	0.98508	other
CL2001032629AA	other	0.00378	0.99622	other
CL2001032630AA (testset)	other	0.04403	0.95597	other
CL2001032632AA	other	0.00331	0.99669	other
CL2001032638AA	other	0.00494	0.99506	other
CL2001032640AA (testset)	other	0.00857	0.99143	other
CL2001032643AA	other	0.02504	0.97496	other
CL2001032644AA (testset)	other	0.02817	0.97183	other
CL2001032647AA	other	0.11142	0.88858	other
CL2001032701AA	other	0.01374	0.98626	other
CL2001032702AA	other	0.08558	0.91442	other
CL2001032703AA	other	0.02876	0.97124	other
CL2001032704AA	other	0.02037	0.97963	other
CL2001032706AA (testset)	other	0.09913	0.90087	other
CL2001032709AA	other	0.01945	0.98055	other
CL2001032716AA	other	0.05085	0.94915	other
CL2001032717AA	other	0.01247	0.98753	other
CL2001032718AA (testset)	NORMAL	0.84282	0.15718	NORMAL
CL2001032719AA	other	0.16161	0.83839	other
CL2001032720AA	other	0.00138	0.99862	other
CL2001032722AA	other	0.00395	0.99605	other
CL2001032724AA	NORMAL	0.2452	0.7548	other
CL2001032725AA	NORMAL	0.73352	0.26648	NORMAL
CL2001032727AA	NORMAL	0.58117	0.41883	NORMAL
CL2001032729AA	other	0.01271	0.98729	other
CL2001032730AA (testset)	other	0.01143	0.98857	other
CL2001032732AA (testset)	other	0.00448	0.99552	other
CL2001032733AA	other	0.02819	0.97181	other
CL2001032738AA (testset)	other	0.00492	0.99508	other
CL2001032742AA (testset)	other	0.00878	0.99122	other
CL2001032746AA	other	0.01303	0.98697	other
CL2001032747AA	other	0.02041	0.97959	other
CL2001032833AA	other	0.04334	0.95666	other
CL2001032836AA (testset)	other	0.01951	0.98049	other
CL2001032838AA (testset)	other	0.02355	0.97645	other
CL2001032839AA	other	0.04385	0.95615	other
CL2001032841AA	other	0.16009	0.83991	other
CL2001032842AA	other	0.01244	0.98756	other
CL2001032843AA (testset)	other	0.03034	0.96966	other
CL2001032845AA (testset)	other	0.07836	0.92164	other
CL2001032846AA	other	0.07364	0.92636	other
CL2001032847AA	other	0.08222	0.91778	other
CL2001032848AA	other	0.86576	0.13424	NORMAL
CL2001032850AA	other	0.00216	0.99784	other
CL2001032853AA	other	0.01582	0.98418	other
CL2001032854AA (testset)	other	0.00446	0.99554	other
CL2001032856AA	other	0.01261	0.98739	other
CL2001032857AA	other	0.06775	0.93225	other
CL2001032860AA (testset)	other	0.00392	0.99608	other
CL2001040305AA	other	0.00332	0.99668	other
CL2001040306AA	other	0.03753	0.96247	other
CL2001041708AA	other	0.03512	0.96488	other
CL2001041711AA	other	0.02011	0.97989	other
CL2001041716AA	other	0.02386	0.97614	other
CL2001042501AA (testset)	other	0.00335	0.99665	other
CL2001042505AA	other	0.00296	0.99704	other
CL2001042506AA (testset)	other	0.3454	0.6546	other