GO:0006357

GO:0006357

regulation of transcription from Pol II promoter (annotated genes)

Biological Process

Parent node

GO:0006357	regulation of transcription from Pol II promoter

This leaf node contains 193 genes

The following 4 of these are used in classification:

	Symbol	Genename	NORMAL score	other score
38183_at	FOXF1	forkhead box F1	0.8373	-0.0743
40202_at	BTEB1	basic transcription element binding protein 1	0.6099	-0.0541
1612_s_at	JUND	jun D proto-oncogene	0.3161	-0.028
41483_s_at	JUND	jun D proto-oncogene	0.2661	-0.0236

Performance on training data

• Error rate: 0.02222
• Performance: 0.21157
• Redundancy: 2.79629

	Sensitivity	Specificity
NORMAL	0.81818	0.99194
other	0.99194	0.81818

Performance on test data

• Error rate: 0.02941
• Performance: 0.17945
• Redundancy: 2.80187

	Sensitivity	Specificity
NORMAL	0.66667	1
other	1	0.66667

Predictions

	Class	NORMAL	other	Predictionn
CL2001031606AA	other	0.01863	0.98137	other
CL2001031607AA	other	0.08593	0.91407	other
CL2001031608AA	other	0.06115	0.93885	other
CL2001031609AA	other	0.04444	0.95556	other
CL2001031611AA	other	0.08507	0.91493	other
CL2001031612AA	other	0.07938	0.92062	other
CL2001031613AA	other	0.12197	0.87803	other
CL2001031615AA	other	0.01258	0.98742	other
CL2001031616AA (testset)	other	0.03724	0.96276	other
CL2001031618AA	other	0.01914	0.98086	other
CL2001031620AA (testset)	other	0.00788	0.99212	other
CL2001031621AA (testset)	other	0.02262	0.97738	other
CL2001031622AA	other	0.0343	0.9657	other
CL2001031625AA	other	0.03484	0.96516	other
CL2001031627AA (testset)	other	0.00871	0.99129	other
CL2001031628AA (testset)	other	0.03891	0.96109	other
CL2001031629AA	other	0.00502	0.99498	other
CL2001031630AA (testset)	other	0.01497	0.98503	other
CL2001031631AA	other	0.00756	0.99244	other
CL2001031632AA	other	0.01386	0.98614	other
CL2001031634AA	other	0.04923	0.95077	other
CL2001031635AA	other	0.02246	0.97754	other
CL2001031636AA	other	0.01688	0.98312	other
CL2001032002AA	other	0.02515	0.97485	other
CL2001032005AA	other	0.01898	0.98102	other
CL2001032008AA	other	0.02118	0.97882	other
CL2001032009AA (testset)	other	0.03669	0.96331	other
CL2001032010AA (testset)	NORMAL	0.48638	0.51362	other
CL2001032011AA (testset)	other	0.09631	0.90369	other
CL2001032012AA (testset)	other	0.01898	0.98102	other
CL2001032013AA (testset)	other	0.01517	0.98483	other
CL2001032015AA	other	0.44761	0.55239	other
CL2001032016AA (testset)	other	0.00761	0.99239	other
CL2001032019AA	other	0.14185	0.85815	other
CL2001032020AA (testset)	other	0.03463	0.96537	other
CL2001032025AA	other	0.01952	0.98048	other
CL2001032026AA	other	0.01697	0.98303	other
CL2001032027AA	other	0.04342	0.95658	other
CL2001032030AA	other	0.01938	0.98062	other
CL2001032031AA (testset)	other	0.04545	0.95455	other
CL2001032032AA	other	0.02779	0.97221	other
CL2001032034AA	other	0.20257	0.79743	other
CL2001032036AA	other	0.05223	0.94777	other
CL2001032041AA	NORMAL	0.6297	0.3703	NORMAL
CL2001032043AA	NORMAL	0.89823	0.10177	NORMAL
CL2001032044AA	other	0.02286	0.97714	other
CL2001032045AA (testset)	NORMAL	0.35967	0.64033	other
CL2001032046AA	NORMAL	0.60639	0.39361	NORMAL
CL2001032101AA	other	0.2747	0.7253	other
CL2001032102AA	NORMAL	0.85626	0.14374	NORMAL
CL2001032103AA	other	0.04954	0.95046	other
CL2001032104AA	other	0.03852	0.96148	other
CL2001032105AA	other	0.01134	0.98866	other
CL2001032107AA	other	0.03963	0.96037	other
CL2001032108AA	other	0.02827	0.97173	other
CL2001032109AA (testset)	other	0.02976	0.97024	other
CL2001032110AA	other	0.20123	0.79877	other
CL2001032111AA	other	0.11175	0.88825	other
CL2001032113AA (testset)	other	0.00225	0.99775	other
CL2001032114AA	other	0.0126	0.9874	other
CL2001032115AA (testset)	other	0.00581	0.99419	other
CL2001032116AA (testset)	other	0.0446	0.9554	other
CL2001032117AA	other	0.07641	0.92359	other
CL2001032121AA	other	0.02474	0.97526	other
CL2001032122AA	other	0.01899	0.98101	other
CL2001032124AA	other	0.02542	0.97458	other
CL2001032125AA	other	0.00455	0.99545	other
CL2001032127AA (testset)	other	0.03365	0.96635	other
CL2001032128AA (testset)	NORMAL	0.60061	0.39939	NORMAL
CL2001032129AA (testset)	other	0.03075	0.96925	other
CL2001032130AA	other	0.02818	0.97182	other
CL2001032132AA	other	0.03312	0.96688	other
CL2001032134AA (testset)	other	0.18692	0.81308	other
CL2001032135AA	other	0.10754	0.89246	other
CL2001032136AA (testset)	other	0.09647	0.90353	other
CL2001032138AA (testset)	other	0.04228	0.95772	other
CL2001032141AA (testset)	other	0.05326	0.94674	other
CL2001032142AA	other	0.01251	0.98749	other
CL2001032144AA	other	0.01103	0.98897	other
CL2001032145AA	other	0.12827	0.87173	other
CL2001032147AA	NORMAL	0.81903	0.18097	NORMAL
CL2001032149AA (testset)	other	0.11952	0.88048	other
CL2001032151AA	other	0.04167	0.95833	other
CL2001032152AA	other	0.07526	0.92474	other
CL2001032153AA	other	0.03586	0.96414	other
CL2001032155AA	other	0.33285	0.66715	other
CL2001032156AA (testset)	other	0.11001	0.88999	other
CL2001032202AA (testset)	NORMAL	0.841	0.159	NORMAL
CL2001032206AA	NORMAL	0.65935	0.34065	NORMAL
CL2001032207AA	other	0.02645	0.97355	other
CL2001032209AA	other	0.03221	0.96779	other
CL2001032210AA	other	0.04706	0.95294	other
CL2001032211AA (testset)	other	0.02629	0.97371	other
CL2001032212AA	other	0.01241	0.98759	other
CL2001032213AA	other	0.09341	0.90659	other
CL2001032214AA (testset)	other	0.24869	0.75131	other
CL2001032217AA (testset)	other	0.01196	0.98804	other
CL2001032218AA	other	0.01012	0.98988	other
CL2001032219AA (testset)	other	0.0697	0.9303	other
CL2001032220AA	NORMAL	0.6452	0.3548	NORMAL
CL2001032222AA (testset)	other	0.01715	0.98285	other
CL2001032229AA (testset)	other	0.01507	0.98493	other
CL2001032231AA	other	0.04234	0.95766	other
CL2001032232AA	other	0.03502	0.96498	other
CL2001032233AA (testset)	other	0.00636	0.99364	other
CL2001032238AA	other	0.03425	0.96575	other
CL2001032239AA	other	0.00845	0.99155	other
CL2001032240AA	other	0.02693	0.97307	other
CL2001032241AA (testset)	other	0.19672	0.80328	other
CL2001032242AA	other	0.04178	0.95822	other
CL2001032243AA	other	0.03681	0.96319	other
CL2001032248AA	other	0.00605	0.99395	other
CL2001032249AA (testset)	other	0.0774	0.9226	other
CL2001032252AA (testset)	other	0.0526	0.9474	other
CL2001032254AA (testset)	other	0.03167	0.96833	other
CL2001032255AA	other	0.00918	0.99082	other
CL2001032256AA (testset)	NORMAL	0.51823	0.48177	NORMAL
CL2001032259AA (testset)	other	0.01745	0.98255	other
CL2001032260AA	other	0.18153	0.81847	other
CL2001032301AA	other	0.03401	0.96599	other
CL2001032304AA	NORMAL	0.18951	0.81049	other
CL2001032305AA (testset)	other	0.02226	0.97774	other
CL2001032306AA (testset)	other	0.03614	0.96386	other
CL2001032307AA (testset)	other	0.11675	0.88325	other
CL2001032308AA	other	0.02376	0.97624	other
CL2001032309AA	other	0.00669	0.99331	other
CL2001032310AA	other	0.02125	0.97875	other
CL2001032311AA (testset)	other	0.01841	0.98159	other
CL2001032312AA	other	0.03121	0.96879	other
CL2001032313AA (testset)	other	0.01226	0.98774	other
CL2001032314AA (testset)	other	0.01243	0.98757	other
CL2001032316AA	other	0.01111	0.98889	other
CL2001032601AA	other	0.02272	0.97728	other
CL2001032602AA	other	0.02018	0.97982	other
CL2001032604AA	other	0.02817	0.97183	other
CL2001032607AA	other	0.06117	0.93883	other
CL2001032608AA	other	0.02805	0.97195	other
CL2001032610AA	other	0.01816	0.98184	other
CL2001032612AA	other	0.10282	0.89718	other
CL2001032613AA (testset)	other	0.01672	0.98328	other
CL2001032614AA	other	0.00844	0.99156	other
CL2001032616AA	other	0.01022	0.98978	other
CL2001032617AA (testset)	other	0.01544	0.98456	other
CL2001032620AA (testset)	other	0.01208	0.98792	other
CL2001032625AA	other	0.02726	0.97274	other
CL2001032627AA	other	0.01222	0.98778	other
CL2001032628AA	other	0.02488	0.97512	other
CL2001032629AA	other	0.09087	0.90913	other
CL2001032630AA (testset)	other	0.06537	0.93463	other
CL2001032632AA	other	0.00866	0.99134	other
CL2001032638AA	other	0.04409	0.95591	other
CL2001032640AA (testset)	other	0.01799	0.98201	other
CL2001032643AA	other	0.05688	0.94312	other
CL2001032644AA (testset)	other	0.03878	0.96122	other
CL2001032647AA	other	0.02789	0.97211	other
CL2001032701AA	other	0.02641	0.97359	other
CL2001032702AA	other	0.04182	0.95818	other
CL2001032703AA	other	0.02971	0.97029	other
CL2001032704AA	other	0.03361	0.96639	other
CL2001032706AA (testset)	other	0.05854	0.94146	other
CL2001032709AA	other	0.03114	0.96886	other
CL2001032716AA	other	0.07713	0.92287	other
CL2001032717AA	other	0.02567	0.97433	other
CL2001032718AA (testset)	NORMAL	0.82577	0.17423	NORMAL
CL2001032719AA	other	0.04353	0.95647	other
CL2001032720AA	other	0.00794	0.99206	other
CL2001032722AA	other	0.06219	0.93781	other
CL2001032724AA	NORMAL	0.158	0.842	other
CL2001032725AA	NORMAL	0.76633	0.23367	NORMAL
CL2001032727AA	NORMAL	0.67938	0.32062	NORMAL
CL2001032729AA	other	0.01594	0.98406	other
CL2001032730AA (testset)	other	0.02892	0.97108	other
CL2001032732AA (testset)	other	0.00854	0.99146	other
CL2001032733AA	other	0.01798	0.98202	other
CL2001032738AA (testset)	other	0.01481	0.98519	other
CL2001032742AA (testset)	other	0.05748	0.94252	other
CL2001032746AA	other	0.02675	0.97325	other
CL2001032747AA	other	0.05309	0.94691	other
CL2001032833AA	other	0.0945	0.9055	other
CL2001032836AA (testset)	other	0.01653	0.98347	other
CL2001032838AA (testset)	other	0.03501	0.96499	other
CL2001032839AA	other	0.03929	0.96071	other
CL2001032841AA	other	0.01772	0.98228	other
CL2001032842AA	other	0.0153	0.9847	other
CL2001032843AA (testset)	other	0.02773	0.97227	other
CL2001032845AA (testset)	other	0.03022	0.96978	other
CL2001032846AA	other	0.07119	0.92881	other
CL2001032847AA	other	0.15029	0.84971	other
CL2001032848AA	other	0.69304	0.30696	NORMAL
CL2001032850AA	other	0.04595	0.95405	other
CL2001032853AA	other	0.04958	0.95042	other
CL2001032854AA (testset)	other	0.02463	0.97537	other
CL2001032856AA	other	0.0159	0.9841	other
CL2001032857AA	other	0.05979	0.94021	other
CL2001032860AA (testset)	other	0.08342	0.91658	other
CL2001040305AA	other	0.00887	0.99113	other
CL2001040306AA	other	0.01599	0.98401	other
CL2001041708AA	other	0.01065	0.98935	other
CL2001041711AA	other	0.01781	0.98219	other
CL2001041716AA	other	0.17758	0.82242	other
CL2001042501AA (testset)	other	0.02653	0.97347	other
CL2001042505AA	other	0.02357	0.97643	other
CL2001042506AA (testset)	other	0.18254	0.81746	other