GO:0007264 | small GTPase mediated signal transduction | Biological Process |
| GO:0007264 | small GTPase mediated signal transduction |
|---|
The following 44 of these are used in classification:
| Symbol | Genename | CARCINOID score | other score | |
|---|---|---|---|---|
| 38886_i_at | ARHI | ras homolog gene family, member I | 2.3052 | -0.2519 |
| 38887_r_at | ARHI | ras homolog gene family, member I | 1.8737 | -0.2048 |
| 36823_at | RPIP8 | RaP2 interacting protein 8 | 1.2681 | -0.1386 |
| 36049_at | RAB6B | RAB6B, member RAS oncogene family | 0.9429 | -0.103 |
| 39058_at | ABR | active BCR-related gene | 0.6702 | -0.0732 |
| 39829_at | ARL7 | ADP-ribosylation factor-like 7 | -0.6555 | 0.0716 |
| 40146_at | RAP1B | RAP1B, member of RAS oncogene family | -0.6082 | 0.0665 |
| 38708_at | RAN | RAN, member RAS oncogene family | -0.5781 | 0.0632 |
| 1395_at | ARHC | ras homolog gene family, member C | -0.53 | 0.0579 |
| 32737_at | RAC2 | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | -0.5223 | 0.0571 |
| 1877_g_at | RALA | v-ral simian leukemia viral oncogene homolog A (ras related) | -0.4976 | 0.0544 |
| 32736_at | RAC2 | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | -0.4696 | 0.0513 |
| 36544_at | ARL3 | ADP-ribosylation factor-like 3 | 0.4663 | -0.051 |
| 33674_at | RPL29 | ribosomal protein L29 | -0.4599 | 0.0503 |
| 34268_at | RGS19 | regulator of G-protein signalling 19 | -0.4307 | 0.0471 |
| 624_at | RAB3B | RAB3B, member RAS oncogene family | 0.4173 | -0.0456 |
| 1825_at | IQGAP1 | IQ motif containing GTPase activating protein 1 | -0.3834 | 0.0419 |
| 32827_at | RRAS2 | related RAS viral (r-ras) oncogene homolog 2 | -0.3524 | 0.0385 |
| 2050_s_at | RAC1 | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | -0.3307 | 0.0361 |
| 39253_s_at | RALA | v-ral simian leukemia viral oncogene homolog A (ras related) | -0.3163 | 0.0346 |
| 41130_at | RANBP3 | RAN binding protein 3 | 0.2395 | -0.0262 |
| 38062_at | GFR | guanine nucleotide exchange factor for Rap1 | -0.2156 | 0.0236 |
| 34724_at | GRLF1 | glucocorticoid receptor DNA binding factor 1 | 0.1994 | -0.0218 |
| 1840_g_at | RAN | RAN, member RAS oncogene family | -0.1981 | 0.0217 |
| 1776_at | RRAD | Ras-related associated with diabetes | -0.1957 | 0.0214 |
| 39528_at | RRAD | Ras-related associated with diabetes | -0.1949 | 0.0213 |
| 1839_at | RAN | RAN, member RAS oncogene family | -0.1668 | 0.0182 |
| 41317_at | RAP2A | RAP2A, member of RAS oncogene family | 0.1475 | -0.0161 |
| 35340_at | RAB8A | RAB8A, member RAS oncogene family | -0.1473 | 0.0161 |
| 36213_at | MFHAS1 | malignant fibrous histiocytoma amplified sequence 1 | -0.1442 | 0.0158 |
| 1848_at | RAP1A | RAP1A, member of RAS oncogene family | -0.1257 | 0.0137 |
| 41523_at | RAB32 | RAB32, member RAS oncogene family | -0.119 | 0.013 |
| 1903_at | RAP1B | RAP1B, member of RAS oncogene family | -0.1082 | 0.0118 |
| 34393_r_at | RAB1A | RAB1A, member RAS oncogene family | -0.1061 | 0.0116 |
| 41451_s_at | SARA1 | SAR1a gene homolog 1 (S. cerevisiae) | -0.0972 | 0.0106 |
| 40864_at | RAC1 | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | -0.0929 | 0.0101 |
| 34392_s_at | RAB1A | RAB1A, member RAS oncogene family | -0.0918 | 0.01 |
| 40555_at | ARHQ | ras homolog gene family, member Q | -0.0758 | 0.0083 |
| 620_at | RAB3A | RAB3A, member RAS oncogene family | 0.0629 | -0.0069 |
| 40210_at | RAB13 | RAB13, member RAS oncogene family | -0.0512 | 0.0056 |
| 37416_at | ARHH | ras homolog gene family, member H | -0.0472 | 0.0052 |
| 41318_g_at | RAP2A | RAP2A, member of RAS oncogene family | 0.0338 | -0.0037 |
| 37537_at | ARFD1 | ADP-ribosylation factor domain protein 1, 64kDa | 0.0237 | -0.0026 |
| 34836_at | RAB5C | RAB5C, member RAS oncogene family | -0.0049 | 5e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Class | CARCINOID | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | other | 0 | 1 | other |
| CL2001031607AA (testset) | other | 0 | 1 | other |
| CL2001031608AA (testset) | other | 0 | 1 | other |
| CL2001031609AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001031611AA (testset) | other | 0 | 1 | other |
| CL2001031612AA (testset) | other | 0 | 1 | other |
| CL2001031613AA (testset) | other | 0 | 1 | other |
| CL2001031615AA (testset) | other | 0 | 1 | other |
| CL2001031616AA (testset) | other | 0 | 1 | other |
| CL2001031618AA (testset) | other | 0.00278 | 0.99722 | other |
| CL2001031620AA (testset) | other | 0 | 1 | other |
| CL2001031621AA (testset) | other | 0 | 1 | other |
| CL2001031622AA (testset) | other | 0 | 1 | other |
| CL2001031625AA (testset) | other | 0 | 1 | other |
| CL2001031627AA (testset) | other | 0 | 1 | other |
| CL2001031628AA (testset) | other | 0 | 1 | other |
| CL2001031629AA (testset) | other | 0 | 1 | other |
| CL2001031630AA (testset) | other | 0.01681 | 0.98319 | other |
| CL2001031631AA (testset) | other | 0 | 1 | other |
| CL2001031632AA (testset) | other | 0 | 1 | other |
| CL2001031634AA (testset) | other | 0.00018 | 0.99982 | other |
| CL2001031635AA (testset) | other | 0 | 1 | other |
| CL2001031636AA (testset) | other | 0 | 1 | other |
| CL2001032002AA (testset) | other | 0.00069 | 0.99931 | other |
| CL2001032005AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032008AA (testset) | other | 0 | 1 | other |
| CL2001032009AA (testset) | other | 0 | 1 | other |
| CL2001032010AA (testset) | other | 0 | 1 | other |
| CL2001032011AA (testset) | other | 0 | 1 | other |
| CL2001032012AA (testset) | other | 0 | 1 | other |
| CL2001032013AA (testset) | other | 0 | 1 | other |
| CL2001032015AA (testset) | other | 0 | 1 | other |
| CL2001032016AA (testset) | other | 0 | 1 | other |
| CL2001032019AA (testset) | other | 0 | 1 | other |
| CL2001032020AA (testset) | other | 0 | 1 | other |
| CL2001032025AA (testset) | other | 0.00017 | 0.99983 | other |
| CL2001032026AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032027AA (testset) | other | 0 | 1 | other |
| CL2001032030AA (testset) | other | 0 | 1 | other |
| CL2001032031AA (testset) | other | 0 | 1 | other |
| CL2001032032AA (testset) | other | 0.00045 | 0.99955 | other |
| CL2001032034AA (testset) | other | 0 | 1 | other |
| CL2001032036AA (testset) | other | 3e-04 | 0.9997 | other |
| CL2001032041AA (testset) | other | 0 | 1 | other |
| CL2001032043AA (testset) | other | 0 | 1 | other |
| CL2001032044AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032045AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032046AA (testset) | other | 0 | 1 | other |
| CL2001032101AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032102AA (testset) | other | 0 | 1 | other |
| CL2001032103AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001032104AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032105AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032107AA (testset) | other | 0 | 1 | other |
| CL2001032108AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032109AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032110AA (testset) | other | 0 | 1 | other |
| CL2001032111AA (testset) | other | 0 | 1 | other |
| CL2001032113AA (testset) | other | 0.01285 | 0.98715 | other |
| CL2001032114AA (testset) | other | 0 | 1 | other |
| CL2001032115AA (testset) | other | 0.04045 | 0.95955 | other |
| CL2001032116AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032117AA (testset) | other | 0 | 1 | other |
| CL2001032121AA (testset) | other | 0.00799 | 0.99201 | other |
| CL2001032122AA (testset) | other | 0 | 1 | other |
| CL2001032124AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032125AA (testset) | other | 0 | 1 | other |
| CL2001032127AA (testset) | CARCINOID | 0.99999 | 1e-05 | CARCINOID |
| CL2001032128AA (testset) | other | 0 | 1 | other |
| CL2001032129AA (testset) | other | 0 | 1 | other |
| CL2001032130AA (testset) | other | 0 | 1 | other |
| CL2001032132AA (testset) | other | 0 | 1 | other |
| CL2001032134AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032135AA (testset) | other | 0 | 1 | other |
| CL2001032136AA (testset) | other | 0 | 1 | other |
| CL2001032138AA (testset) | other | 0 | 1 | other |
| CL2001032141AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032142AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032144AA (testset) | other | 0 | 1 | other |
| CL2001032145AA (testset) | CARCINOID | 0.99685 | 0.00315 | CARCINOID |
| CL2001032147AA (testset) | other | 0 | 1 | other |
| CL2001032149AA (testset) | other | 0 | 1 | other |
| CL2001032151AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032152AA (testset) | CARCINOID | 0.99986 | 0.00014 | CARCINOID |
| CL2001032153AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032155AA (testset) | other | 0 | 1 | other |
| CL2001032156AA (testset) | other | 0 | 1 | other |
| CL2001032202AA (testset) | other | 0 | 1 | other |
| CL2001032206AA (testset) | other | 0 | 1 | other |
| CL2001032207AA (testset) | other | 0 | 1 | other |
| CL2001032209AA (testset) | other | 0 | 1 | other |
| CL2001032210AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032211AA (testset) | other | 0 | 1 | other |
| CL2001032212AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032213AA (testset) | other | 0 | 1 | other |
| CL2001032214AA (testset) | other | 0 | 1 | other |
| CL2001032217AA (testset) | other | 0.00113 | 0.99887 | other |
| CL2001032218AA (testset) | other | 0 | 1 | other |
| CL2001032219AA (testset) | CARCINOID | 0.98808 | 0.01192 | CARCINOID |
| CL2001032220AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032222AA (testset) | other | 0 | 1 | other |
| CL2001032229AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032231AA (testset) | other | 0 | 1 | other |
| CL2001032232AA (testset) | other | 0 | 1 | other |
| CL2001032233AA (testset) | other | 0 | 1 | other |
| CL2001032238AA (testset) | CARCINOID | 0.98829 | 0.01171 | CARCINOID |
| CL2001032239AA (testset) | other | 0 | 1 | other |
| CL2001032240AA (testset) | other | 0 | 1 | other |
| CL2001032241AA (testset) | other | 0 | 1 | other |
| CL2001032242AA (testset) | other | 0 | 1 | other |
| CL2001032243AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032248AA (testset) | other | 0 | 1 | other |
| CL2001032249AA (testset) | other | 0 | 1 | other |
| CL2001032252AA (testset) | other | 0 | 1 | other |
| CL2001032254AA (testset) | other | 0 | 1 | other |
| CL2001032255AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032256AA (testset) | other | 0 | 1 | other |
| CL2001032259AA (testset) | other | 0 | 1 | other |
| CL2001032260AA (testset) | other | 0.00131 | 0.99869 | other |
| CL2001032301AA (testset) | other | 0 | 1 | other |
| CL2001032304AA (testset) | other | 0 | 1 | other |
| CL2001032305AA (testset) | other | 0 | 1 | other |
| CL2001032306AA (testset) | other | 0 | 1 | other |
| CL2001032307AA (testset) | other | 0 | 1 | other |
| CL2001032308AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032309AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032310AA (testset) | other | 0.00161 | 0.99839 | other |
| CL2001032311AA (testset) | other | 0 | 1 | other |
| CL2001032312AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032313AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032314AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032316AA (testset) | other | 0 | 1 | other |
| CL2001032601AA (testset) | other | 0 | 1 | other |
| CL2001032602AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032604AA (testset) | other | 0.00049 | 0.99951 | other |
| CL2001032607AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032608AA (testset) | other | 0 | 1 | other |
| CL2001032610AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032612AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032613AA (testset) | other | 0 | 1 | other |
| CL2001032614AA (testset) | other | 0.00023 | 0.99977 | other |
| CL2001032616AA (testset) | other | 0.00062 | 0.99938 | other |
| CL2001032617AA (testset) | other | 0 | 1 | other |
| CL2001032620AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032625AA (testset) | other | 0.00586 | 0.99414 | other |
| CL2001032627AA (testset) | other | 0 | 1 | other |
| CL2001032628AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032629AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032630AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032632AA (testset) | other | 0.00092 | 0.99908 | other |
| CL2001032638AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032640AA (testset) | other | 0.00032 | 0.99968 | other |
| CL2001032643AA (testset) | other | 0 | 1 | other |
| CL2001032644AA (testset) | other | 0 | 1 | other |
| CL2001032647AA (testset) | other | 0 | 1 | other |
| CL2001032701AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032702AA (testset) | other | 0 | 1 | other |
| CL2001032703AA (testset) | other | 0 | 1 | other |
| CL2001032704AA (testset) | other | 0 | 1 | other |
| CL2001032706AA (testset) | other | 0 | 1 | other |
| CL2001032709AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032716AA (testset) | other | 0 | 1 | other |
| CL2001032717AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032718AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032719AA (testset) | other | 0 | 1 | other |
| CL2001032720AA (testset) | other | 0.31139 | 0.68861 | other |
| CL2001032722AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032724AA (testset) | other | 0 | 1 | other |
| CL2001032725AA (testset) | other | 0 | 1 | other |
| CL2001032727AA (testset) | other | 0 | 1 | other |
| CL2001032729AA (testset) | other | 0 | 1 | other |
| CL2001032730AA (testset) | other | 0 | 1 | other |
| CL2001032732AA (testset) | other | 0.00023 | 0.99977 | other |
| CL2001032733AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032738AA (testset) | other | 0 | 1 | other |
| CL2001032742AA (testset) | other | 0 | 1 | other |
| CL2001032746AA (testset) | other | 0 | 1 | other |
| CL2001032747AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032833AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032836AA (testset) | other | 0 | 1 | other |
| CL2001032838AA (testset) | other | 0 | 1 | other |
| CL2001032839AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032841AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032842AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032843AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032845AA (testset) | other | 0 | 1 | other |
| CL2001032846AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032847AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032848AA (testset) | other | 0 | 1 | other |
| CL2001032850AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032853AA (testset) | other | 0 | 1 | other |
| CL2001032854AA (testset) | CARCINOID | 0.99841 | 0.00159 | CARCINOID |
| CL2001032856AA (testset) | other | 0 | 1 | other |
| CL2001032857AA (testset) | other | 0.00017 | 0.99983 | other |
| CL2001032860AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001040305AA (testset) | other | 0.00049 | 0.99951 | other |
| CL2001040306AA (testset) | other | 0.00131 | 0.99869 | other |
| CL2001041708AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001041711AA (testset) | other | 0.00077 | 0.99923 | other |
| CL2001041716AA (testset) | other | 0 | 1 | other |
| CL2001042501AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001042505AA (testset) | other | 0.00325 | 0.99675 | other |
| CL2001042506AA (testset) | other | 0 | 1 | other |