GO:0006811 | ion transport | Biological Process |
| GO:0006811 | ion transport |
|---|
The following 14 of these are used in classification:
| Symbol | Genename | CARCINOID score | other score | |
|---|---|---|---|---|
| 40746_at | GRIA2 | glutamate receptor, ionotropic, AMPA 2 | 1.9005 | -0.2077 |
| 41325_at | KCNK3 | potassium channel, subfamily K, member 3 | 1.5747 | -0.1721 |
| 31817_at | GABRB3 | gamma-aminobutyric acid (GABA) A receptor, beta 3 | 1.5583 | -0.1703 |
| 33051_at | GABRR1 | gamma-aminobutyric acid (GABA) receptor, rho 1 | 0.9201 | -0.1006 |
| 35048_at | GRIA3 | glutamate receptor, ionotrophic, AMPA 3 | 0.6494 | -0.071 |
| 34904_at | GRIK5 | glutamate receptor, ionotropic, kainate 5 | 0.6404 | -0.07 |
| 32425_at | CHRNA2 | cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal) | 0.3766 | -0.0412 |
| 37435_s_at | KCNJ6 | potassium inwardly-rectifying channel, subfamily J, member 6 | 0.368 | -0.0402 |
| 33891_at | CLIC4 | chloride intracellular channel 4 | -0.2557 | 0.0279 |
| 40954_at | FXYD2 | FXYD domain containing ion transport regulator 2 | 0.2046 | -0.0224 |
| 37684_at | SLCO2B1 | solute carrier organic anion transporter family, member 2B1 | -0.1641 | 0.0179 |
| 39646_at | CACNB2 | calcium channel, voltage-dependent, beta 2 subunit | 0.0737 | -0.008 |
| 35207_at | SCNN1A | sodium channel, nonvoltage-gated 1 alpha | -0.0431 | 0.0047 |
| 34905_at | GRIK5 | glutamate receptor, ionotropic, kainate 5 | 0.0041 | -4e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Class | CARCINOID | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | other | 0 | 1 | other |
| CL2001031607AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001031608AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031609AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001031611AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001031612AA (testset) | other | 0 | 1 | other |
| CL2001031613AA (testset) | other | 0 | 1 | other |
| CL2001031615AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001031616AA (testset) | other | 0 | 1 | other |
| CL2001031618AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001031620AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031621AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001031622AA (testset) | other | 0 | 1 | other |
| CL2001031625AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001031627AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001031628AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001031629AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031630AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001031631AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031632AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001031634AA (testset) | other | 0.00209 | 0.99791 | other |
| CL2001031635AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031636AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032002AA (testset) | other | 0.00013 | 0.99987 | other |
| CL2001032005AA (testset) | other | 0.01099 | 0.98901 | other |
| CL2001032008AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032009AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032010AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032011AA (testset) | other | 0.00013 | 0.99987 | other |
| CL2001032012AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032013AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032015AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032016AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032019AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032020AA (testset) | other | 0 | 1 | other |
| CL2001032025AA (testset) | other | 0.00071 | 0.99929 | other |
| CL2001032026AA (testset) | other | 0.00057 | 0.99943 | other |
| CL2001032027AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032030AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032031AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032032AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032034AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032036AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032041AA (testset) | other | 0.001 | 0.999 | other |
| CL2001032043AA (testset) | other | 0.00113 | 0.99887 | other |
| CL2001032044AA (testset) | CARCINOID | 0.99999 | 1e-05 | CARCINOID |
| CL2001032045AA (testset) | other | 0.00479 | 0.99521 | other |
| CL2001032046AA (testset) | other | 0.00245 | 0.99755 | other |
| CL2001032101AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032102AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001032103AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032104AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032105AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032107AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032108AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032109AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032110AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032111AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032113AA (testset) | other | 0.00295 | 0.99705 | other |
| CL2001032114AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032115AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032116AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032117AA (testset) | other | 0.00019 | 0.99981 | other |
| CL2001032121AA (testset) | other | 0.01308 | 0.98692 | other |
| CL2001032122AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032124AA (testset) | CARCINOID | 0.99921 | 0.00079 | CARCINOID |
| CL2001032125AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032127AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032128AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032129AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032130AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032132AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032134AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032135AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032136AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032138AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032141AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032142AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032144AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032145AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032147AA (testset) | other | 0.00019 | 0.99981 | other |
| CL2001032149AA (testset) | other | 0 | 1 | other |
| CL2001032151AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032152AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032153AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032155AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032156AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032202AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032206AA (testset) | other | 2e-04 | 0.9998 | other |
| CL2001032207AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032209AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032210AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032211AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032212AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001032213AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032214AA (testset) | other | 0 | 1 | other |
| CL2001032217AA (testset) | other | 0.03244 | 0.96756 | other |
| CL2001032218AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032219AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032220AA (testset) | other | 0.00145 | 0.99855 | other |
| CL2001032222AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032229AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032231AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032232AA (testset) | other | 0 | 1 | other |
| CL2001032233AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032238AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032239AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032240AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032241AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032242AA (testset) | other | 0 | 1 | other |
| CL2001032243AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032248AA (testset) | other | 0 | 1 | other |
| CL2001032249AA (testset) | other | 0.00062 | 0.99938 | other |
| CL2001032252AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032254AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032255AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032256AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032259AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032260AA (testset) | other | 0.39608 | 0.60392 | other |
| CL2001032301AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032304AA (testset) | other | 0.00042 | 0.99958 | other |
| CL2001032305AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032306AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032307AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032308AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032309AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032310AA (testset) | other | 0.00032 | 0.99968 | other |
| CL2001032311AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032312AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032313AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032314AA (testset) | other | 0.00023 | 0.99977 | other |
| CL2001032316AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032601AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032602AA (testset) | other | 0.00021 | 0.99979 | other |
| CL2001032604AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032607AA (testset) | CARCINOID | 0.99998 | 2e-05 | CARCINOID |
| CL2001032608AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032610AA (testset) | other | 3e-04 | 0.9997 | other |
| CL2001032612AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032613AA (testset) | other | 0.00024 | 0.99976 | other |
| CL2001032614AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032616AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001032617AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032620AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032625AA (testset) | other | 0.29832 | 0.70168 | other |
| CL2001032627AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032628AA (testset) | other | 0.00024 | 0.99976 | other |
| CL2001032629AA (testset) | CARCINOID | 0.99927 | 0.00073 | CARCINOID |
| CL2001032630AA (testset) | CARCINOID | 0.94852 | 0.05148 | CARCINOID |
| CL2001032632AA (testset) | other | 0.1582 | 0.8418 | other |
| CL2001032638AA (testset) | other | 0 | 1 | other |
| CL2001032640AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032643AA (testset) | other | 0 | 1 | other |
| CL2001032644AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032647AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032701AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032702AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032703AA (testset) | other | 0 | 1 | other |
| CL2001032704AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032706AA (testset) | other | 0 | 1 | other |
| CL2001032709AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032716AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032717AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032718AA (testset) | other | 0.00411 | 0.99589 | other |
| CL2001032719AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032720AA (testset) | other | 0.07485 | 0.92515 | other |
| CL2001032722AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032724AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032725AA (testset) | other | 0.00722 | 0.99278 | other |
| CL2001032727AA (testset) | other | 0.0015 | 0.9985 | other |
| CL2001032729AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032730AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032732AA (testset) | other | 0 | 1 | other |
| CL2001032733AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032738AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032742AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032746AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032747AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032833AA (testset) | other | 0 | 1 | other |
| CL2001032836AA (testset) | other | 0 | 1 | other |
| CL2001032838AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032839AA (testset) | other | 0.00082 | 0.99918 | other |
| CL2001032841AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032842AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032843AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032845AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032846AA (testset) | other | 0.00038 | 0.99962 | other |
| CL2001032847AA (testset) | CARCINOID | 0.99954 | 0.00046 | CARCINOID |
| CL2001032848AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032850AA (testset) | CARCINOID | 0.99999 | 1e-05 | CARCINOID |
| CL2001032853AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032854AA (testset) | CARCINOID | 0.99903 | 0.00097 | CARCINOID |
| CL2001032856AA (testset) | other | 0 | 1 | other |
| CL2001032857AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032860AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001040305AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001040306AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001041708AA (testset) | other | 0.00039 | 0.99961 | other |
| CL2001041711AA (testset) | other | 0.00027 | 0.99973 | other |
| CL2001041716AA (testset) | other | 0.00064 | 0.99936 | other |
| CL2001042501AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001042505AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001042506AA (testset) | other | 3e-05 | 0.99997 | other |