GO:0006334 | nucleosome assembly | Biological Process |
| GO:0006334 | nucleosome assembly |
|---|
The following 30 of these are used in classification:
| Symbol | Genename | CARCINOID score | other score | |
|---|---|---|---|---|
| 40165_at | SE20-4 | cutaneous T-cell lymphoma-associated tumor antigen se20-4 | 2.868 | -0.3134 |
| 33835_at | TSPYL4 | TSPY-like 4 | 1.2576 | -0.1374 |
| 33352_at | HIST2H2AC | histone 2, H2ac | 0.7845 | -0.0857 |
| 40195_at | H2AFX | H2A histone family, member X | -0.6079 | 0.0664 |
| 32819_at | HIST1H2BK | histone 1, H2bk | -0.4627 | 0.0506 |
| 39337_at | H2AFZ | H2A histone family, member Z | -0.45 | 0.0492 |
| 743_at | NAP1L3 | nucleosome assembly protein 1-like 3 | 0.4423 | -0.0483 |
| 35203_at | MYST4 | MYST histone acetyltransferase (monocytic leukemia) 4 | 0.238 | -0.026 |
| 34157_f_at | HIST1H2AL | histone 1, H2al | -0.2331 | 0.0255 |
| 36347_f_at | HIST1H2BN | histone 1, H2bn | -0.2228 | 0.0244 |
| 37018_at | HIST1H1C | histone 1, H1c | -0.1871 | 0.0204 |
| 32730_at | KIAA1750 | KIAA1750 protein | 0.1538 | -0.0168 |
| 32980_f_at | HIST1H2BC | histone 1, H2bc | -0.144 | 0.0157 |
| 571_at | NAP1L1 | nucleosome assembly protein 1-like 1 | -0.1437 | 0.0157 |
| 527_at | CENPA | centromere protein A, 17kDa | -0.0981 | 0.0107 |
| 38576_at | HIST1H2BD | histone 1, H2bd | -0.0777 | 0.0085 |
| 34099_f_at | NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0758 | 0.0083 |
| 33030_at | HIST1H1D | histone 1, H1d | -0.0708 | 0.0077 |
| 31528_f_at | HIST1H2BM | histone 1, H2bm | -0.0699 | 0.0076 |
| 31523_f_at | HIST1H2BE | histone 1, H2be | -0.0685 | 0.0075 |
| 32575_at | NAP1L4 | nucleosome assembly protein 1-like 4 | -0.0647 | 0.0071 |
| 34964_at | HIST1H2AD | histone 1, H2ad | -0.0541 | 0.0059 |
| 286_at | HIST2H2AA | histone 2, H2aa | -0.0529 | 0.0058 |
| 31693_f_at | HIST1H2AD | histone 1, H2ad | -0.0422 | 0.0046 |
| 35127_at | HIST1H2AE | histone 1, H2ae | -0.0381 | 0.0042 |
| 319_g_at | H1FX | H1 histone family, member X | 0.0352 | -0.0038 |
| 35562_at | HIST1H2BJ | histone 1, H2bj | -0.0345 | 0.0038 |
| 153_f_at | HIST1H2BJ | histone 1, H2bj | -0.021 | 0.0023 |
| 31751_f_at | HIST1H1B | histone 1, H1b | -0.0135 | 0.0015 |
| 318_at | H1FX | H1 histone family, member X | 0.0013 | -1e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Sensitivity | Specificity | |
|---|---|---|
| CARCINOID | 1 | 1 |
| other | 1 | 1 |
| Class | CARCINOID | other | Predictionn | |
|---|---|---|---|---|
| CL2001031606AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001031607AA (testset) | other | 0.00028 | 0.99972 | other |
| CL2001031608AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001031609AA (testset) | CARCINOID | 0.99989 | 0.00011 | CARCINOID |
| CL2001031611AA (testset) | other | 0.00134 | 0.99866 | other |
| CL2001031612AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001031613AA (testset) | other | 0.00206 | 0.99794 | other |
| CL2001031615AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001031616AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031618AA (testset) | other | 0.00013 | 0.99987 | other |
| CL2001031620AA (testset) | other | 0 | 1 | other |
| CL2001031621AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001031622AA (testset) | other | 0.00013 | 0.99987 | other |
| CL2001031625AA (testset) | other | 0.00031 | 0.99969 | other |
| CL2001031627AA (testset) | other | 0 | 1 | other |
| CL2001031628AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001031629AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001031630AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001031631AA (testset) | other | 0 | 1 | other |
| CL2001031632AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001031634AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001031635AA (testset) | other | 0.00033 | 0.99967 | other |
| CL2001031636AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032002AA (testset) | other | 0.0017 | 0.9983 | other |
| CL2001032005AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032008AA (testset) | other | 0 | 1 | other |
| CL2001032009AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032010AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032011AA (testset) | other | 3e-04 | 0.9997 | other |
| CL2001032012AA (testset) | other | 0 | 1 | other |
| CL2001032013AA (testset) | other | 0.0023 | 0.9977 | other |
| CL2001032015AA (testset) | other | 0.01326 | 0.98674 | other |
| CL2001032016AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032019AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032020AA (testset) | other | 0 | 1 | other |
| CL2001032025AA (testset) | other | 2e-04 | 0.9998 | other |
| CL2001032026AA (testset) | other | 0.00613 | 0.99387 | other |
| CL2001032027AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032030AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032031AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032032AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032034AA (testset) | other | 0.01595 | 0.98405 | other |
| CL2001032036AA (testset) | other | 0.00029 | 0.99971 | other |
| CL2001032041AA (testset) | other | 0.00099 | 0.99901 | other |
| CL2001032043AA (testset) | other | 0.0031 | 0.9969 | other |
| CL2001032044AA (testset) | CARCINOID | 0.99663 | 0.00337 | CARCINOID |
| CL2001032045AA (testset) | other | 0.00186 | 0.99814 | other |
| CL2001032046AA (testset) | other | 0.00118 | 0.99882 | other |
| CL2001032101AA (testset) | CARCINOID | 0.9988 | 0.0012 | CARCINOID |
| CL2001032102AA (testset) | other | 0.00537 | 0.99463 | other |
| CL2001032103AA (testset) | other | 0.00021 | 0.99979 | other |
| CL2001032104AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032105AA (testset) | other | 0 | 1 | other |
| CL2001032107AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032108AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032109AA (testset) | other | 0.00044 | 0.99956 | other |
| CL2001032110AA (testset) | other | 2e-04 | 0.9998 | other |
| CL2001032111AA (testset) | other | 0.00035 | 0.99965 | other |
| CL2001032113AA (testset) | other | 0 | 1 | other |
| CL2001032114AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001032115AA (testset) | other | 0.00041 | 0.99959 | other |
| CL2001032116AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032117AA (testset) | other | 0 | 1 | other |
| CL2001032121AA (testset) | other | 0.00015 | 0.99985 | other |
| CL2001032122AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032124AA (testset) | CARCINOID | 0.91539 | 0.08461 | CARCINOID |
| CL2001032125AA (testset) | other | 0.00436 | 0.99564 | other |
| CL2001032127AA (testset) | CARCINOID | 0.99997 | 3e-05 | CARCINOID |
| CL2001032128AA (testset) | other | 0.02207 | 0.97793 | other |
| CL2001032129AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032130AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032132AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032134AA (testset) | other | 0.00027 | 0.99973 | other |
| CL2001032135AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032136AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032138AA (testset) | other | 0 | 1 | other |
| CL2001032141AA (testset) | other | 0.00028 | 0.99972 | other |
| CL2001032142AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032144AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032145AA (testset) | CARCINOID | 1 | 0 | CARCINOID |
| CL2001032147AA (testset) | other | 0.00026 | 0.99974 | other |
| CL2001032149AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032151AA (testset) | CARCINOID | 0.99351 | 0.00649 | CARCINOID |
| CL2001032152AA (testset) | CARCINOID | 0.99996 | 4e-05 | CARCINOID |
| CL2001032153AA (testset) | other | 0.00025 | 0.99975 | other |
| CL2001032155AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032156AA (testset) | other | 0.00031 | 0.99969 | other |
| CL2001032202AA (testset) | other | 0.00385 | 0.99615 | other |
| CL2001032206AA (testset) | other | 0.00067 | 0.99933 | other |
| CL2001032207AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032209AA (testset) | other | 0 | 1 | other |
| CL2001032210AA (testset) | CARCINOID | 0.99971 | 0.00029 | CARCINOID |
| CL2001032211AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032212AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032213AA (testset) | other | 0.00286 | 0.99714 | other |
| CL2001032214AA (testset) | other | 0.00346 | 0.99654 | other |
| CL2001032217AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032218AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032219AA (testset) | CARCINOID | 0.99206 | 0.00794 | CARCINOID |
| CL2001032220AA (testset) | other | 0.00042 | 0.99958 | other |
| CL2001032222AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032229AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032231AA (testset) | other | 0.00027 | 0.99973 | other |
| CL2001032232AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032233AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032238AA (testset) | CARCINOID | 0.99986 | 0.00014 | CARCINOID |
| CL2001032239AA (testset) | other | 0.00058 | 0.99942 | other |
| CL2001032240AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032241AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032242AA (testset) | other | 0 | 1 | other |
| CL2001032243AA (testset) | other | 0.00362 | 0.99638 | other |
| CL2001032248AA (testset) | other | 0 | 1 | other |
| CL2001032249AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032252AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032254AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032255AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032256AA (testset) | other | 0.00021 | 0.99979 | other |
| CL2001032259AA (testset) | other | 0.00516 | 0.99484 | other |
| CL2001032260AA (testset) | other | 0.00079 | 0.99921 | other |
| CL2001032301AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032304AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032305AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032306AA (testset) | other | 8e-05 | 0.99992 | other |
| CL2001032307AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001032308AA (testset) | other | 0.00013 | 0.99987 | other |
| CL2001032309AA (testset) | other | 0 | 1 | other |
| CL2001032310AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032311AA (testset) | other | 0 | 1 | other |
| CL2001032312AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032313AA (testset) | other | 0.00038 | 0.99962 | other |
| CL2001032314AA (testset) | other | 0 | 1 | other |
| CL2001032316AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032601AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032602AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032604AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032607AA (testset) | CARCINOID | 0.99975 | 0.00025 | CARCINOID |
| CL2001032608AA (testset) | other | 9e-05 | 0.99991 | other |
| CL2001032610AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032612AA (testset) | other | 0.00048 | 0.99952 | other |
| CL2001032613AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032614AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032616AA (testset) | other | 3e-04 | 0.9997 | other |
| CL2001032617AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032620AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032625AA (testset) | other | 0.00054 | 0.99946 | other |
| CL2001032627AA (testset) | other | 0 | 1 | other |
| CL2001032628AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032629AA (testset) | CARCINOID | 0.99462 | 0.00538 | CARCINOID |
| CL2001032630AA (testset) | CARCINOID | 0.99421 | 0.00579 | CARCINOID |
| CL2001032632AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001032638AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032640AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032643AA (testset) | other | 0 | 1 | other |
| CL2001032644AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032647AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032701AA (testset) | other | 0 | 1 | other |
| CL2001032702AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032703AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032704AA (testset) | other | 0.00046 | 0.99954 | other |
| CL2001032706AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032709AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032716AA (testset) | other | 0.00036 | 0.99964 | other |
| CL2001032717AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032718AA (testset) | other | 0.00126 | 0.99874 | other |
| CL2001032719AA (testset) | other | 0.00011 | 0.99989 | other |
| CL2001032720AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032722AA (testset) | CARCINOID | 0.99904 | 0.00096 | CARCINOID |
| CL2001032724AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001032725AA (testset) | other | 0.00022 | 0.99978 | other |
| CL2001032727AA (testset) | other | 0.00063 | 0.99937 | other |
| CL2001032729AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032730AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032732AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032733AA (testset) | other | 1e-05 | 0.99999 | other |
| CL2001032738AA (testset) | other | 0 | 1 | other |
| CL2001032742AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032746AA (testset) | other | 4e-05 | 0.99996 | other |
| CL2001032747AA (testset) | other | 0.00061 | 0.99939 | other |
| CL2001032833AA (testset) | other | 0.00081 | 0.99919 | other |
| CL2001032836AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032838AA (testset) | other | 3e-05 | 0.99997 | other |
| CL2001032839AA (testset) | other | 0.00027 | 0.99973 | other |
| CL2001032841AA (testset) | other | 0.00029 | 0.99971 | other |
| CL2001032842AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001032843AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032845AA (testset) | other | 0.0018 | 0.9982 | other |
| CL2001032846AA (testset) | other | 1e-04 | 0.9999 | other |
| CL2001032847AA (testset) | CARCINOID | 0.99928 | 0.00072 | CARCINOID |
| CL2001032848AA (testset) | other | 0.00059 | 0.99941 | other |
| CL2001032850AA (testset) | CARCINOID | 0.99511 | 0.00489 | CARCINOID |
| CL2001032853AA (testset) | other | 7e-05 | 0.99993 | other |
| CL2001032854AA (testset) | CARCINOID | 0.64355 | 0.35645 | CARCINOID |
| CL2001032856AA (testset) | other | 0.00012 | 0.99988 | other |
| CL2001032857AA (testset) | other | 0.00016 | 0.99984 | other |
| CL2001032860AA (testset) | CARCINOID | 0.99994 | 6e-05 | CARCINOID |
| CL2001040305AA (testset) | other | 0 | 1 | other |
| CL2001040306AA (testset) | other | 5e-05 | 0.99995 | other |
| CL2001041708AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001041711AA (testset) | other | 6e-05 | 0.99994 | other |
| CL2001041716AA (testset) | other | 0.00014 | 0.99986 | other |
| CL2001042501AA (testset) | CARCINOID | 0.99983 | 0.00017 | CARCINOID |
| CL2001042505AA (testset) | other | 2e-05 | 0.99998 | other |
| CL2001042506AA (testset) | other | 0.00016 | 0.99984 | other |