GO:0009653 | morphogenesis | Biological Process |
| GO:0009653 | morphogenesis |
|---|
The following 77 of these are used in classification:
| Symbol | Genename | ADENO score | NORMAL score | |
|---|---|---|---|---|
| 39350_at | GPC3 | glypican 3 | -0.2738 | 2.239 |
| 897_at | PKD1 | polycystic kidney disease 1 (autosomal dominant) | -0.0824 | 0.6734 |
| 38918_at | SOX13 | SRY (sex determining region Y)-box 13 | -0.0788 | 0.6441 |
| 34335_at | EFNB2 | ephrin-B2 | -0.0779 | 0.6368 |
| 33558_at | TBX5 | T-box 5 | -0.0772 | 0.6314 |
| 205_g_at | HOXA4 | homeo box A4 | -0.0725 | 0.593 |
| 38772_at | CYR61 | cysteine-rich, angiogenic inducer, 61 | -0.0665 | 0.5439 |
| 38181_at | MMP11 | matrix metalloproteinase 11 (stromelysin 3) | 0.0639 | -0.5224 |
| 380_at | TBX5 | T-box 5 | -0.0631 | 0.5163 |
| 37920_at | PITX1 | paired-like homeodomain transcription factor 1 | 0.0587 | -0.4797 |
| 32521_at | SFRP1 | secreted frizzled-related protein 1 | -0.0565 | 0.4617 |
| 34296_at | MID1 | midline 1 (Opitz/BBB syndrome) | -0.0557 | 0.4551 |
| 1237_at | IER3 | immediate early response 3 | 0.0551 | -0.4504 |
| 40403_at | MYOC | myocilin, trabecular meshwork inducible glucocorticoid response | -0.0507 | 0.4149 |
| 864_at | HLXB9 | homeo box HB9 | 0.0492 | -0.4023 |
| 31851_at | RFP2 | ret finger protein 2 | -0.0488 | 0.3988 |
| 204_at | HOXA4 | homeo box A4 | -0.0481 | 0.3932 |
| 40454_at | FAT | FAT tumor suppressor homolog 1 (Drosophila) | 0.0462 | -0.378 |
| 34334_at | EFNB2 | ephrin-B2 | -0.0413 | 0.3381 |
| 40445_at | ELF3 | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) | 0.0397 | -0.3249 |
| 34891_at | DNCL1 | dynein, cytoplasmic, light polypeptide 1 | -0.0364 | 0.2979 |
| 40328_at | TWIST1 | twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila) | 0.035 | -0.2862 |
| 31669_s_at | HOXA11 | homeo box A11 | 0.0344 | -0.281 |
| 836_at | PTCH | patched homolog (Drosophila) | -0.0323 | 0.2644 |
| 1526_i_at | FGF8 | fibroblast growth factor 8 (androgen-induced) | 0.0323 | -0.2644 |
| 36702_at | TBX19 | T-box 19 | -0.0308 | 0.2515 |
| 38439_at | NFE2L1 | nuclear factor (erythroid-derived 2)-like 1 | -0.0298 | 0.2439 |
| 31602_at | TBX6 | T-box 6 | 0.029 | -0.2373 |
| 36708_at | CPM | carboxypeptidase M | -0.0287 | 0.2343 |
| 34488_i_at | FSCN2 | fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) | 0.0282 | -0.231 |
| 40864_at | RAC1 | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | -0.0268 | 0.2194 |
| 33128_s_at | CST6 | cystatin E/M | -0.0268 | 0.219 |
| 31513_at | LBX1 | transcription factor similar to D. melanogaster homeodomain protein lady bird late | 0.0256 | -0.2094 |
| 163_at | DVL1 | dishevelled, dsh homolog 1 (Drosophila) | 0.0252 | -0.2057 |
| 40393_at | HOXA4 | homeo box A4 | -0.0248 | 0.2025 |
| 1853_at | WNT1 | wingless-type MMTV integration site family, member 1 | 0.0247 | -0.202 |
| 41586_at | FGF18 | fibroblast growth factor 18 | -0.0244 | 0.1998 |
| 33565_at | TSHB | thyroid stimulating hormone, beta | -0.0243 | 0.1984 |
| 1902_at | ERCC1 | excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) | 0.0225 | -0.1838 |
| 41869_at | PES1 | pescadillo homolog 1, containing BRCT domain (zebrafish) | 0.0199 | -0.1624 |
| 38988_at | WHSC1 | Wolf-Hirschhorn syndrome candidate 1 | 0.0185 | -0.1516 |
| 41700_at | F2R | coagulation factor II (thrombin) receptor | -0.0181 | 0.1481 |
| 121_at | PAX8 | paired box gene 8 | -0.0181 | 0.148 |
| 38214_at | PTCH | patched homolog (Drosophila) | 0.0169 | -0.1384 |
| 34627_at | KRTHA5 | keratin, hair, acidic, 5 | -0.0162 | 0.1327 |
| 34251_at | HOXB5 | homeo box B5 | -0.0158 | 0.1293 |
| 36519_at | ERCC1 | excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) | 0.0155 | -0.1267 |
| 38959_s_at | CASR | calcium-sensing receptor (hypocalciuric hypercalcemia 1, severe neonatal hyperparathyroidism) | 0.0155 | -0.1263 |
| 41027_at | FOXC1 | forkhead box C1 | 0.0148 | -0.1207 |
| 37139_at | ED1 | ectodermal dysplasia 1, anhidrotic | -0.0142 | 0.1159 |
| 1525_s_at | FGF8 | fibroblast growth factor 8 (androgen-induced) | 0.0138 | -0.1129 |
| 41427_at | WNT11 | wingless-type MMTV integration site family, member 11 | 0.0137 | -0.1124 |
| 2050_s_at | RAC1 | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | -0.0128 | 0.1048 |
| 34986_at | EVA1 | epithelial V-like antigen 1 | 0.011 | -0.09 |
| 32474_at | PAX7 | paired box gene 7 | 0.0108 | -0.0886 |
| 32300_s_at | TH | tyrosine hydroxylase | 0.0106 | -0.087 |
| 33129_at | CST6 | cystatin E/M | 0.0102 | -0.0835 |
| 36508_at | GPC4 | glypican 4 | 0.0101 | -0.0827 |
| 33684_at | WNT2B | wingless-type MMTV integration site family, member 2B | -0.0092 | 0.0754 |
| 31655_at | DNCL1 | dynein, cytoplasmic, light polypeptide 1 | -0.0092 | 0.0752 |
| 31620_at | TBX10 | T-box 10 | 0.009 | -0.0739 |
| 34489_f_at | FSCN2 | fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) | -0.0082 | 0.0671 |
| 1878_g_at | ERCC1 | excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) | 0.0078 | -0.064 |
| 145_s_at | TBX5 | T-box 5 | -0.0073 | 0.0599 |
| 37073_at | EYA1 | eyes absent homolog 1 (Drosophila) | -0.0071 | 0.0578 |
| 36018_at | SOX10 | SRY (sex determining region Y)-box 10 | 0.0063 | -0.0517 |
| 34631_at | EYA4 | eyes absent homolog 4 (Drosophila) | -0.0059 | 0.0479 |
| 996_at | FGF1 | fibroblast growth factor 1 (acidic) | -0.0054 | 0.0442 |
| 41588_at | FGF18 | fibroblast growth factor 18 | -0.0035 | 0.0288 |
| 39297_at | MAB21L1 | mab-21-like 1 (C. elegans) | -0.0035 | 0.0287 |
| 38750_at | NOTCH3 | Notch homolog 3 (Drosophila) | 0.0031 | -0.0256 |
| 39605_at | FOXG1B | forkhead box G1B | 0.0015 | -0.0124 |
| 33330_at | CLTCL1 | clathrin, heavy polypeptide-like 1 | 0.0012 | -0.0097 |
| 160040_at | EDN3 | endothelin 3 | -8e-04 | 0.0063 |
| 36370_at | FOXE1 | forkhead box E1 (thyroid transcription factor 2) | 6e-04 | -0.0047 |
| 38958_at | CASR | calcium-sensing receptor (hypocalciuric hypercalcemia 1, severe neonatal hyperparathyroidism) | 4e-04 | -0.0036 |
| 1855_at | FGF3 | fibroblast growth factor 3 (murine mammary tumor virus integration site (v-int-2) oncogene homolog) | 1e-04 | -4e-04 |
| Sensitivity | Specificity | |
|---|---|---|
| ADENO | 0.96403 | 0.88235 |
| NORMAL | 0.88235 | 0.96403 |
| Sensitivity | Specificity | |
|---|---|---|
| ADENO | 0.96403 | 0.88235 |
| NORMAL | 0.88235 | 0.96403 |
| Class | ADENO | NORMAL | Predictionn | |
|---|---|---|---|---|
| CL2001031608AA (testset) | ADENO | 0.994 | 0.006 | ADENO |
| CL2001031611AA (testset) | ADENO | 0.99982 | 0.00018 | ADENO |
| CL2001031612AA (testset) | ADENO | 0.99377 | 0.00623 | ADENO |
| CL2001031613AA (testset) | ADENO | 0.90163 | 0.09837 | ADENO |
| CL2001031615AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001031616AA (testset) | ADENO | 0.99852 | 0.00148 | ADENO |
| CL2001031618AA (testset) | ADENO | 0.99991 | 9e-05 | ADENO |
| CL2001031622AA (testset) | ADENO | 0.99787 | 0.00213 | ADENO |
| CL2001031625AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001031627AA (testset) | ADENO | 0.99976 | 0.00024 | ADENO |
| CL2001031628AA (testset) | ADENO | 0.9998 | 2e-04 | ADENO |
| CL2001031629AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001031630AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001031631AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001031632AA (testset) | ADENO | 0.99397 | 0.00603 | ADENO |
| CL2001031634AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001031635AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001031636AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032002AA (testset) | ADENO | 0.9999 | 1e-04 | ADENO |
| CL2001032005AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032008AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032009AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032011AA (testset) | ADENO | 0.99919 | 0.00081 | ADENO |
| CL2001032012AA (testset) | ADENO | 0.99987 | 0.00013 | ADENO |
| CL2001032013AA (testset) | ADENO | 0.99859 | 0.00141 | ADENO |
| CL2001032015AA (testset) | ADENO | 0.98184 | 0.01816 | ADENO |
| CL2001032016AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032019AA (testset) | ADENO | 0.99994 | 6e-05 | ADENO |
| CL2001032020AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032025AA (testset) | ADENO | 0.99935 | 0.00065 | ADENO |
| CL2001032026AA (testset) | ADENO | 0.99983 | 0.00017 | ADENO |
| CL2001032027AA (testset) | ADENO | 0.99946 | 0.00054 | ADENO |
| CL2001032030AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032031AA (testset) | ADENO | 0.96545 | 0.03455 | ADENO |
| CL2001032032AA (testset) | ADENO | 0.99899 | 0.00101 | ADENO |
| CL2001032034AA (testset) | ADENO | 0.11255 | 0.88745 | NORMAL |
| CL2001032036AA (testset) | ADENO | 0.02609 | 0.97391 | NORMAL |
| CL2001032103AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032104AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032105AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032107AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032108AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032109AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032110AA (testset) | ADENO | 0.99958 | 0.00042 | ADENO |
| CL2001032111AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001032113AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032114AA (testset) | ADENO | 0.99997 | 3e-05 | ADENO |
| CL2001032115AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032116AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032117AA (testset) | ADENO | 0.99916 | 0.00084 | ADENO |
| CL2001032125AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032130AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032132AA (testset) | ADENO | 0.99236 | 0.00764 | ADENO |
| CL2001032134AA (testset) | ADENO | 0.97139 | 0.02861 | ADENO |
| CL2001032135AA (testset) | ADENO | 0.86872 | 0.13128 | ADENO |
| CL2001032136AA (testset) | ADENO | 0.99852 | 0.00148 | ADENO |
| CL2001032138AA (testset) | ADENO | 0.99974 | 0.00026 | ADENO |
| CL2001032141AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032142AA (testset) | ADENO | 0.22563 | 0.77437 | NORMAL |
| CL2001032149AA (testset) | ADENO | 0.99969 | 0.00031 | ADENO |
| CL2001032155AA (testset) | ADENO | 0.59581 | 0.40419 | ADENO |
| CL2001032156AA (testset) | ADENO | 0.96587 | 0.03413 | ADENO |
| CL2001032211AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032212AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001032213AA (testset) | ADENO | 0.99234 | 0.00766 | ADENO |
| CL2001032214AA (testset) | ADENO | 0.0028 | 0.9972 | NORMAL |
| CL2001032229AA (testset) | ADENO | 0.99991 | 9e-05 | ADENO |
| CL2001032232AA (testset) | ADENO | 0.99528 | 0.00472 | ADENO |
| CL2001032233AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032241AA (testset) | ADENO | 0.99985 | 0.00015 | ADENO |
| CL2001032242AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032243AA (testset) | ADENO | 0.81478 | 0.18522 | ADENO |
| CL2001032248AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032249AA (testset) | ADENO | 0.99967 | 0.00033 | ADENO |
| CL2001032252AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032254AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032255AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032259AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032301AA (testset) | ADENO | 0.9968 | 0.0032 | ADENO |
| CL2001032306AA (testset) | ADENO | 0.99962 | 0.00038 | ADENO |
| CL2001032307AA (testset) | ADENO | 0.70728 | 0.29272 | ADENO |
| CL2001032308AA (testset) | ADENO | 0.99994 | 6e-05 | ADENO |
| CL2001032309AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032310AA (testset) | ADENO | 0.99997 | 3e-05 | ADENO |
| CL2001032311AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032312AA (testset) | ADENO | 0.99997 | 3e-05 | ADENO |
| CL2001032313AA (testset) | ADENO | 0.99987 | 0.00013 | ADENO |
| CL2001032314AA (testset) | ADENO | 0.91608 | 0.08392 | ADENO |
| CL2001032316AA (testset) | ADENO | 0.99991 | 9e-05 | ADENO |
| CL2001032601AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032602AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032604AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001032610AA (testset) | ADENO | 0.99989 | 0.00011 | ADENO |
| CL2001032612AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032613AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032614AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032616AA (testset) | ADENO | 0.99789 | 0.00211 | ADENO |
| CL2001032617AA (testset) | ADENO | 0.99979 | 0.00021 | ADENO |
| CL2001032620AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032625AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032628AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032638AA (testset) | ADENO | 0.99972 | 0.00028 | ADENO |
| CL2001032640AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032643AA (testset) | ADENO | 0.99995 | 5e-05 | ADENO |
| CL2001032647AA (testset) | ADENO | 0.993 | 0.007 | ADENO |
| CL2001032701AA (testset) | ADENO | 0.99995 | 5e-05 | ADENO |
| CL2001032702AA (testset) | ADENO | 0.99933 | 0.00067 | ADENO |
| CL2001032703AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032704AA (testset) | ADENO | 0.9639 | 0.0361 | ADENO |
| CL2001032706AA (testset) | ADENO | 0.99827 | 0.00173 | ADENO |
| CL2001032709AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032716AA (testset) | ADENO | 0.99656 | 0.00344 | ADENO |
| CL2001032717AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032729AA (testset) | ADENO | 0.99996 | 4e-05 | ADENO |
| CL2001032730AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032733AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032738AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032742AA (testset) | ADENO | 0.99957 | 0.00043 | ADENO |
| CL2001032746AA (testset) | ADENO | 0.99581 | 0.00419 | ADENO |
| CL2001032747AA (testset) | ADENO | 0.99898 | 0.00102 | ADENO |
| CL2001032833AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032836AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001032838AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032839AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032841AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032842AA (testset) | ADENO | 0.9999 | 1e-04 | ADENO |
| CL2001032843AA (testset) | ADENO | 0.99997 | 3e-05 | ADENO |
| CL2001032845AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001032846AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001032848AA (testset) | ADENO | 0.00172 | 0.99828 | NORMAL |
| CL2001032856AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001032857AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001040305AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001040306AA (testset) | ADENO | 0.99998 | 2e-05 | ADENO |
| CL2001041708AA (testset) | ADENO | 0.99999 | 1e-05 | ADENO |
| CL2001041711AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001041716AA (testset) | ADENO | 0.99904 | 0.00096 | ADENO |
| CL2001042505AA (testset) | ADENO | 1 | 0 | ADENO |
| CL2001042506AA (testset) | ADENO | 0.99997 | 3e-05 | ADENO |
| CL2001032010AA (testset) | NORMAL | 0.13815 | 0.86185 | NORMAL |
| CL2001032041AA (testset) | NORMAL | 0.0023 | 0.9977 | NORMAL |
| CL2001032043AA (testset) | NORMAL | 1e-05 | 0.99999 | NORMAL |
| CL2001032045AA (testset) | NORMAL | 0.00198 | 0.99802 | NORMAL |
| CL2001032046AA (testset) | NORMAL | 0.00204 | 0.99796 | NORMAL |
| CL2001032102AA (testset) | NORMAL | 0.00052 | 0.99948 | NORMAL |
| CL2001032128AA (testset) | NORMAL | 1e-05 | 0.99999 | NORMAL |
| CL2001032147AA (testset) | NORMAL | 8e-05 | 0.99992 | NORMAL |
| CL2001032202AA (testset) | NORMAL | 0.00028 | 0.99972 | NORMAL |
| CL2001032206AA (testset) | NORMAL | 0.00121 | 0.99879 | NORMAL |
| CL2001032220AA (testset) | NORMAL | 0.00276 | 0.99724 | NORMAL |
| CL2001032256AA (testset) | NORMAL | 0.50464 | 0.49536 | ADENO |
| CL2001032304AA (testset) | NORMAL | 0.03349 | 0.96651 | NORMAL |
| CL2001032718AA (testset) | NORMAL | 0 | 1 | NORMAL |
| CL2001032724AA (testset) | NORMAL | 0.7235 | 0.2765 | ADENO |
| CL2001032725AA (testset) | NORMAL | 0.00032 | 0.99968 | NORMAL |
| CL2001032727AA (testset) | NORMAL | 0.02147 | 0.97853 | NORMAL |