GO:0007267

GO:0007267

cell-cell signaling (annotated genes)

Biological Process

Parent node

GO:0007267	cell-cell signaling

This leaf node contains 331 genes

The following 25 of these are used in classification:

	Symbol	Genename	ADENO score	NORMAL score
34342_s_at	SPP1	secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)	0.1381	-1.07
2092_s_at	SPP1	secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)	0.1104	-0.8559
36061_at	SEMA5A	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	-0.0917	0.7106
38124_at	MDK	midkine (neurite growth-promoting factor 2)	0.0715	-0.5538
577_at	MDK	midkine (neurite growth-promoting factor 2)	0.0699	-0.5418
35178_at	WIF1	WNT inhibitory factor 1	-0.0697	0.5405
823_at	CX3CL1	chemokine (C-X3-C motif) ligand 1	-0.0627	0.4858
36958_at	ZYX	zyxin	-0.0581	0.4502
38299_at	IL6	interleukin 6 (interferon, beta 2)	-0.0565	0.438
1113_at	BMP2	bone morphogenetic protein 2	-0.0491	0.3807
758_at	PTGIR	prostaglandin I2 (prostacyclin) receptor (IP)	-0.0479	0.3711
41198_at	GRN	granulin	-0.0401	0.3109
40367_at	BMP2	bone morphogenetic protein 2	-0.0398	0.3081
875_g_at	CCL2	chemokine (C-C motif) ligand 2	-0.0391	0.3034
1334_s_at	CSF3	colony stimulating factor 3 (granulocyte)	-0.0384	0.2979
39994_at	CCR1	chemokine (C-C motif) receptor 1	-0.0359	0.2784
35204_at	SEMA5A	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	-0.0331	0.2568
34375_at	CCL2	chemokine (C-C motif) ligand 2	-0.0319	0.2474
36503_at	CCL21	chemokine (C-C motif) ligand 21	-0.0311	0.241
224_at	TIEG	TGFB inducible early growth response	-0.0264	0.2044
38374_at	TIEG	TGFB inducible early growth response	-0.0244	0.1889
32666_at	CXCL12	chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)	-0.0185	0.1432
41104_at	CXCL13	chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)	0.014	-0.1088
35898_at	WISP2	WNT1 inducible signaling pathway protein 2	-0.005	0.0384
32128_at	CCL18	chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)	-7e-04	0.0055

Performance on training data

• Error rate: 0.01905
• Performance: 0.13914
• Redundancy: 4.71696

	Sensitivity	Specificity
ADENO	0.98925	0.91667
NORMAL	0.91667	0.98925

Performance on test data

• Error rate: 0.05882
• Performance: 0.68889
• Redundancy: 4.77412

	Sensitivity	Specificity
ADENO	0.93478	1
NORMAL	1	0.93478

Predictions

	Class	ADENO	NORMAL	Predictionn
CL2001031608AA	ADENO	0.7708	0.2292	ADENO
CL2001031611AA (testset)	ADENO	0.96467	0.03533	ADENO
CL2001031612AA	ADENO	0.76938	0.23062	ADENO
CL2001031613AA	ADENO	0.99955	0.00045	ADENO
CL2001031615AA	ADENO	0.99901	0.00099	ADENO
CL2001031616AA	ADENO	0.98819	0.01181	ADENO
CL2001031618AA (testset)	ADENO	0.98808	0.01192	ADENO
CL2001031622AA	ADENO	0.99992	8e-05	ADENO
CL2001031625AA (testset)	ADENO	0.97672	0.02328	ADENO
CL2001031627AA	ADENO	0.99686	0.00314	ADENO
CL2001031628AA	ADENO	0.99567	0.00433	ADENO
CL2001031629AA	ADENO	0.97256	0.02744	ADENO
CL2001031630AA	ADENO	0.99823	0.00177	ADENO
CL2001031631AA	ADENO	0.99798	0.00202	ADENO
CL2001031632AA	ADENO	0.99998	2e-05	ADENO
CL2001031634AA	ADENO	0.98907	0.01093	ADENO
CL2001031635AA	ADENO	0.99828	0.00172	ADENO
CL2001031636AA	ADENO	0.99995	5e-05	ADENO
CL2001032002AA	ADENO	0.99187	0.00813	ADENO
CL2001032005AA	ADENO	0.99898	0.00102	ADENO
CL2001032008AA	ADENO	1	0	ADENO
CL2001032009AA (testset)	ADENO	0.99998	2e-05	ADENO
CL2001032011AA	ADENO	0.99094	0.00906	ADENO
CL2001032012AA (testset)	ADENO	0.99976	0.00024	ADENO
CL2001032013AA (testset)	ADENO	0.99946	0.00054	ADENO
CL2001032015AA	ADENO	0.6921	0.3079	ADENO
CL2001032016AA	ADENO	0.99993	7e-05	ADENO
CL2001032019AA	ADENO	0.99967	0.00033	ADENO
CL2001032020AA	ADENO	0.94976	0.05024	ADENO
CL2001032025AA	ADENO	0.99954	0.00046	ADENO
CL2001032026AA	ADENO	0.99996	4e-05	ADENO
CL2001032027AA (testset)	ADENO	0.99302	0.00698	ADENO
CL2001032030AA (testset)	ADENO	0.99904	0.00096	ADENO
CL2001032031AA	ADENO	0.83601	0.16399	ADENO
CL2001032032AA (testset)	ADENO	0.34439	0.65561	NORMAL
CL2001032034AA (testset)	ADENO	0.576	0.424	ADENO
CL2001032036AA	ADENO	0.99865	0.00135	ADENO
CL2001032103AA	ADENO	0.9998	2e-04	ADENO
CL2001032104AA (testset)	ADENO	0.66244	0.33756	ADENO
CL2001032105AA	ADENO	0.99932	0.00068	ADENO
CL2001032107AA	ADENO	0.99525	0.00475	ADENO
CL2001032108AA (testset)	ADENO	0.96013	0.03987	ADENO
CL2001032109AA	ADENO	0.69501	0.30499	ADENO
CL2001032110AA	ADENO	0.99264	0.00736	ADENO
CL2001032111AA	ADENO	0.9654	0.0346	ADENO
CL2001032113AA	ADENO	0.9998	2e-04	ADENO
CL2001032114AA	ADENO	0.99974	0.00026	ADENO
CL2001032115AA (testset)	ADENO	0.99761	0.00239	ADENO
CL2001032116AA (testset)	ADENO	0.99791	0.00209	ADENO
CL2001032117AA	ADENO	0.99969	0.00031	ADENO
CL2001032125AA (testset)	ADENO	0.99994	6e-05	ADENO
CL2001032130AA	ADENO	0.99971	0.00029	ADENO
CL2001032132AA	ADENO	0.97925	0.02075	ADENO
CL2001032134AA (testset)	ADENO	0.98232	0.01768	ADENO
CL2001032135AA	ADENO	0.98854	0.01146	ADENO
CL2001032136AA	ADENO	0.97539	0.02461	ADENO
CL2001032138AA	ADENO	0.9991	9e-04	ADENO
CL2001032141AA	ADENO	0.73708	0.26292	ADENO
CL2001032142AA	ADENO	0.99892	0.00108	ADENO
CL2001032149AA (testset)	ADENO	0.90608	0.09392	ADENO
CL2001032155AA (testset)	ADENO	0.01417	0.98583	NORMAL
CL2001032156AA	ADENO	0.97765	0.02235	ADENO
CL2001032211AA (testset)	ADENO	0.99998	2e-05	ADENO
CL2001032212AA	ADENO	0.99868	0.00132	ADENO
CL2001032213AA	ADENO	0.82592	0.17408	ADENO
CL2001032214AA	ADENO	0.98261	0.01739	ADENO
CL2001032229AA	ADENO	0.99739	0.00261	ADENO
CL2001032232AA (testset)	ADENO	0.99991	9e-05	ADENO
CL2001032233AA	ADENO	0.99825	0.00175	ADENO
CL2001032241AA	ADENO	0.99458	0.00542	ADENO
CL2001032242AA	ADENO	0.99947	0.00053	ADENO
CL2001032243AA	ADENO	0.99945	0.00055	ADENO
CL2001032248AA	ADENO	1	0	ADENO
CL2001032249AA (testset)	ADENO	0.88238	0.11762	ADENO
CL2001032252AA	ADENO	0.99914	0.00086	ADENO
CL2001032254AA	ADENO	0.99985	0.00015	ADENO
CL2001032255AA	ADENO	0.99869	0.00131	ADENO
CL2001032259AA	ADENO	0.99922	0.00078	ADENO
CL2001032301AA (testset)	ADENO	0.79109	0.20891	ADENO
CL2001032306AA	ADENO	0.99698	0.00302	ADENO
CL2001032307AA	ADENO	0.1842	0.8158	NORMAL
CL2001032308AA (testset)	ADENO	0.9934	0.0066	ADENO
CL2001032309AA	ADENO	0.99984	0.00016	ADENO
CL2001032310AA (testset)	ADENO	0.99825	0.00175	ADENO
CL2001032311AA	ADENO	0.99994	6e-05	ADENO
CL2001032312AA	ADENO	0.98455	0.01545	ADENO
CL2001032313AA (testset)	ADENO	0.98127	0.01873	ADENO
CL2001032314AA (testset)	ADENO	0.99993	7e-05	ADENO
CL2001032316AA	ADENO	0.99789	0.00211	ADENO
CL2001032601AA (testset)	ADENO	0.99955	0.00045	ADENO
CL2001032602AA (testset)	ADENO	0.99155	0.00845	ADENO
CL2001032604AA	ADENO	0.99997	3e-05	ADENO
CL2001032610AA	ADENO	0.99952	0.00048	ADENO
CL2001032612AA	ADENO	0.70612	0.29388	ADENO
CL2001032613AA	ADENO	0.94799	0.05201	ADENO
CL2001032614AA	ADENO	0.99984	0.00016	ADENO
CL2001032616AA (testset)	ADENO	0.99976	0.00024	ADENO
CL2001032617AA (testset)	ADENO	0.99855	0.00145	ADENO
CL2001032620AA	ADENO	0.99827	0.00173	ADENO
CL2001032625AA	ADENO	0.99985	0.00015	ADENO
CL2001032628AA	ADENO	0.9999	1e-04	ADENO
CL2001032638AA (testset)	ADENO	0.99915	0.00085	ADENO
CL2001032640AA	ADENO	0.9996	4e-04	ADENO
CL2001032643AA (testset)	ADENO	0.99802	0.00198	ADENO
CL2001032647AA	ADENO	0.90956	0.09044	ADENO
CL2001032701AA (testset)	ADENO	0.99993	7e-05	ADENO
CL2001032702AA	ADENO	0.999	0.001	ADENO
CL2001032703AA (testset)	ADENO	0.99609	0.00391	ADENO
CL2001032704AA (testset)	ADENO	0.99598	0.00402	ADENO
CL2001032706AA	ADENO	0.98001	0.01999	ADENO
CL2001032709AA	ADENO	0.99982	0.00018	ADENO
CL2001032716AA	ADENO	0.94263	0.05737	ADENO
CL2001032717AA	ADENO	0.73045	0.26955	ADENO
CL2001032729AA	ADENO	0.99954	0.00046	ADENO
CL2001032730AA	ADENO	0.99972	0.00028	ADENO
CL2001032733AA (testset)	ADENO	0.99555	0.00445	ADENO
CL2001032738AA (testset)	ADENO	0.99997	3e-05	ADENO
CL2001032742AA	ADENO	0.99884	0.00116	ADENO
CL2001032746AA	ADENO	0.9998	2e-04	ADENO
CL2001032747AA	ADENO	0.99991	9e-05	ADENO
CL2001032833AA (testset)	ADENO	0.99992	8e-05	ADENO
CL2001032836AA	ADENO	0.99963	0.00037	ADENO
CL2001032838AA	ADENO	0.99992	8e-05	ADENO
CL2001032839AA	ADENO	0.75513	0.24487	ADENO
CL2001032841AA (testset)	ADENO	0.99913	0.00087	ADENO
CL2001032842AA	ADENO	0.99825	0.00175	ADENO
CL2001032843AA (testset)	ADENO	0.99998	2e-05	ADENO
CL2001032845AA (testset)	ADENO	0.997	0.003	ADENO
CL2001032846AA	ADENO	0.99247	0.00753	ADENO
CL2001032848AA (testset)	ADENO	2e-05	0.99998	NORMAL
CL2001032856AA	ADENO	0.99979	0.00021	ADENO
CL2001032857AA	ADENO	0.99032	0.00968	ADENO
CL2001040305AA (testset)	ADENO	0.99834	0.00166	ADENO
CL2001040306AA (testset)	ADENO	0.99841	0.00159	ADENO
CL2001041708AA (testset)	ADENO	0.99933	0.00067	ADENO
CL2001041711AA	ADENO	0.97879	0.02121	ADENO
CL2001041716AA	ADENO	0.89725	0.10275	ADENO
CL2001042505AA (testset)	ADENO	0.98165	0.01835	ADENO
CL2001042506AA	ADENO	0.98492	0.01508	ADENO
CL2001032010AA (testset)	NORMAL	0.00089	0.99911	NORMAL
CL2001032041AA	NORMAL	0.00037	0.99963	NORMAL
CL2001032043AA (testset)	NORMAL	7e-05	0.99993	NORMAL
CL2001032045AA	NORMAL	0.00354	0.99646	NORMAL
CL2001032046AA	NORMAL	4e-04	0.9996	NORMAL
CL2001032102AA	NORMAL	7e-05	0.99993	NORMAL
CL2001032128AA (testset)	NORMAL	4e-05	0.99996	NORMAL
CL2001032147AA	NORMAL	1e-05	0.99999	NORMAL
CL2001032202AA	NORMAL	1e-05	0.99999	NORMAL
CL2001032206AA (testset)	NORMAL	0	1	NORMAL
CL2001032220AA	NORMAL	0	1	NORMAL
CL2001032256AA	NORMAL	0.85803	0.14197	ADENO
CL2001032304AA	NORMAL	0.02447	0.97553	NORMAL
CL2001032718AA	NORMAL	2e-05	0.99998	NORMAL
CL2001032724AA	NORMAL	0.03703	0.96297	NORMAL
CL2001032725AA (testset)	NORMAL	0.00113	0.99887	NORMAL
CL2001032727AA	NORMAL	0	1	NORMAL