GO:0006811


GO:0006811

ion transport
(annotated genes)

Biological
Process

Parent node

This leaf node contains 134 genes

The following 112 of these are used in classification:

 SymbolGenenameADENO scoreNORMAL score
41325_atKCNK3 potassium channel, subfamily K, member 3-0.20941.6229
32109_atFXYD1 FXYD domain containing ion transport regulator 1 (phospholemman)-0.17631.3666
37684_atSLCO2B1 solute carrier organic anion transporter family, member 2B1-0.13161.0201
41688_atTM4SF11 transmembrane 4 superfamily member 11 (plasmolipin)-0.12770.9897
31901_atKCNAB2 potassium voltage-gated channel, shaker-related subfamily, beta member 2-0.11350.8793
33891_atCLIC4 chloride intracellular channel 4-0.10490.813
39008_atCP ceruloplasmin (ferroxidase)0.0959-0.7434
41106_atKCNN4 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 40.0781-0.6053
37552_atKCNK1 potassium channel, subfamily K, member 10.0777-0.6021
40391_atSLC22A4 solute carrier family 22 (organic cation transporter), member 4-0.06940.5378
37451_atSLCO3A1 solute carrier organic anion transporter family, member 3A1-0.06930.5374
33568_atCHRNB4 cholinergic receptor, nicotinic, beta polypeptide 4-0.06930.5374
35472_atKCNJ15 potassium inwardly-rectifying channel, subfamily J, member 15-0.06860.532
39682_atSCNN1B sodium channel, nonvoltage-gated 1, beta (Liddle syndrome)-0.06540.5067
41689_atTM4SF11 transmembrane 4 superfamily member 11 (plasmolipin)-0.06370.4933
38069_atCLCN7 chloride channel 70.0618-0.4793
34726_atCACNB3 calcium channel, voltage-dependent, beta 3 subunit0.0618-0.4788
31711_atGRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D0.0584-0.4526
40396_atP2RX5 purinergic receptor P2X, ligand-gated ion channel, 50.0573-0.4443
39521_atSLC12A4 solute carrier family 12 (potassium/chloride transporters), member 4-0.05580.4325
40335_atCLCN4 chloride channel 4-0.05120.3966
34462_atSCNN1D sodium channel, nonvoltage-gated 1, delta0.0506-0.3922
31567_atGABRG3 gamma-aminobutyric acid (GABA) A receptor, gamma 3-0.050.3873
35098_atGABRD gamma-aminobutyric acid (GABA) A receptor, delta0.046-0.3567
34906_g_atGRIK5 glutamate receptor, ionotropic, kainate 5-0.0440.341
34154_atCHRNB2 cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)0.0427-0.331
34428_atKCNJ8 potassium inwardly-rectifying channel, subfamily J, member 8-0.04070.3151
35207_atSCNN1A sodium channel, nonvoltage-gated 1 alpha0.0405-0.3141
741_g_atHTR3A 5-hydroxytryptamine (serotonin) receptor 3A0.04-0.3097
36433_atGLRA3 glycine receptor, alpha 3-0.03950.3063
41538_r_atGRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C0.0389-0.3016
31993_f_atCACNB2 calcium channel, voltage-dependent, beta 2 subunit0.0372-0.288
31733_atP2RX3 purinergic receptor P2X, ligand-gated ion channel, 30.0369-0.2864
38516_atSCN1B sodium channel, voltage-gated, type I, beta0.0366-0.2839
34554_atGLRA2 glycine receptor, alpha 20.032-0.2482
40954_atFXYD2 FXYD domain containing ion transport regulator 20.0314-0.2435
32404_atCNGA3 cyclic nucleotide gated channel alpha 30.031-0.2402
36853_atGRIA1 glutamate receptor, ionotropic, AMPA 1-0.02920.226
35028_atGABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1-0.02820.2184
36817_atCFTR cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)-0.02750.2134
38625_g_atSLC12A4 solute carrier family 12 (potassium/chloride transporters), member 4-0.02750.2133
33064_atCACNG1 calcium channel, voltage-dependent, gamma subunit 1-0.02650.205
36285_atKCNJ4 potassium inwardly-rectifying channel, subfamily J, member 4-0.02590.2008
41539_atGRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C0.0256-0.1982
38236_atGRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A0.0253-0.1965
32185_atPRKWNK1 protein kinase, lysine deficient 1-0.0250.1935
38203_atKCNN1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 10.024-0.1861
39834_atCHRNE cholinergic receptor, nicotinic, epsilon polypeptide0.0239-0.1855
41326_atKCNK3 potassium channel, subfamily K, member 30.0234-0.1816
34447_atCHRNA4 cholinergic receptor, nicotinic, alpha polypeptide 40.0233-0.1807
40174_atCLCN2 chloride channel 20.0231-0.1791
34200_atCLCN6 chloride channel 6-0.02310.179
31554_atCHRND cholinergic receptor, nicotinic, delta polypeptide0.0229-0.1778
35050_atGRIA3 glutamate receptor, ionotrophic, AMPA 3-0.02240.1737
35049_g_atGRIA3 glutamate receptor, ionotrophic, AMPA 30.0223-0.1731
39498_atFXYD2 FXYD domain containing ion transport regulator 2-0.02220.1721
34143_atCHRNA1 cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)0.022-0.1708
33051_atGABRR1 gamma-aminobutyric acid (GABA) receptor, rho 1-0.0220.1702
34019_atCHRNA3 cholinergic receptor, nicotinic, alpha polypeptide 3-0.02120.1644
36762_atGABRG2 gamma-aminobutyric acid (GABA) A receptor, gamma 2-0.02090.1616
39665_atGLRB glycine receptor, beta0.0207-0.1602
32084_atSLC22A5 solute carrier family 22 (organic cation transporter), member 5-0.01960.1522
36397_atCHRNA5 cholinergic receptor, nicotinic, alpha polypeptide 50.0194-0.1501
31726_atGABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3-0.01930.1496
39566_atCHRNA7 cholinergic receptor, nicotinic, alpha polypeptide 7-0.01910.1479
31900_atKCNAB2 potassium voltage-gated channel, shaker-related subfamily, beta member 2-0.01810.1406
35867_atSLC22A2 solute carrier family 22 (organic cation transporter), member 20.018-0.1393
36816_s_atCFTR cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)-0.01780.1378
39313_atPRKWNK1 protein kinase, lysine deficient 1-0.01760.1365
33535_atP2RX1 purinergic receptor P2X, ligand-gated ion channel, 1-0.01710.1326
36434_r_atGLRA3 glycine receptor, alpha 3-0.01710.1325
34905_atGRIK5 glutamate receptor, ionotropic, kainate 50.0155-0.1197
34280_atGABRE gamma-aminobutyric acid (GABA) A receptor, epsilon0.015-0.116
32988_atCLCNKA chloride channel Ka0.0147-0.1143
36663_atCLCN6 chloride channel 6-0.0140.1087
36764_atCACNG3 calcium channel, voltage-dependent, gamma subunit 30.0125-0.0969
37953_s_atACCN2 amiloride-sensitive cation channel 2, neuronal-0.01230.0956
32495_atCLCN1 chloride channel 1, skeletal muscle (Thomsen disease, autosomal dominant)0.0115-0.089
32496_atKCNE1 potassium voltage-gated channel, Isk-related family, member 1-0.01150.0889
36854_s_atGRIA1 glutamate receptor, ionotropic, AMPA 1-0.01050.0817
34024_atCLCN5 chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease)0.0095-0.0735
37423_atSLC12A2 solute carrier family 12 (sodium/potassium/chloride transporters), member 20.0095-0.0734
34208_atSLC12A5 solute carrier family 12, (potassium-chloride transporter) member 50.0091-0.0706
41776_atATOX1 ATX1 antioxidant protein 1 homolog (yeast)0.0091-0.0703
32489_atGRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B0.0091-0.0703
39647_s_atCACNB2 calcium channel, voltage-dependent, beta 2 subunit-0.00860.067
40339_atGABRP gamma-aminobutyric acid (GABA) A receptor, pi0.0084-0.0652
35113_atSLC22A1 solute carrier family 22 (organic cation transporter), member 1-0.00840.0648
39321_atGABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5-0.00830.0645
36855_r_atGRIA1 glutamate receptor, ionotropic, AMPA 10.0081-0.063
31817_atGABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3-0.00780.0607
39646_atCACNB2 calcium channel, voltage-dependent, beta 2 subunit-0.00770.0597
37051_atKCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 30.0067-0.0518
38624_atSLC12A4 solute carrier family 12 (potassium/chloride transporters), member 4-0.00640.0496
34904_atGRIK5 glutamate receptor, ionotropic, kainate 50.0057-0.0444
34087_atKCNK2 potassium channel, subfamily K, member 2-0.00540.0421
33552_atSLCO1A2 solute carrier organic anion transporter family, member 1A2-0.00540.0419
740_atHTR3A 5-hydroxytryptamine (serotonin) receptor 3A0.0053-0.0408
36349_atKCNJ2 potassium inwardly-rectifying channel, subfamily J, member 20.0049-0.0377
34540_atGRIK3 glutamate receptor, ionotropic, kainate 30.0048-0.037
41703_r_atAKAP7 A kinase (PRKA) anchor protein 7-0.00470.0362
39573_atGRIK2 glutamate receptor, ionotropic, kainate 20.0043-0.0334
36323_atGABRA1 gamma-aminobutyric acid (GABA) A receptor, alpha 10.0035-0.0267
40746_atGRIA2 glutamate receptor, ionotropic, AMPA 2-0.00320.0246
37601_atSLC22A3 solute carrier family 22 (extraneuronal monoamine transporter), member 30.0032-0.0245
36237_atSLC22A6 solute carrier family 22 (organic anion transporter), member 60.0029-0.0225
40317_atACCN1 amiloride-sensitive cation channel 1, neuronal (degenerin)0.0026-0.0204
37435_s_atKCNJ6 potassium inwardly-rectifying channel, subfamily J, member 6-0.00260.0202
31551_atGABRR2 gamma-aminobutyric acid (GABA) receptor, rho 2-0.00150.012
37062_atGABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 20.0011-0.0084
32356_atKCNJ5 potassium inwardly-rectifying channel, subfamily J, member 50.0011-0.0083
41477_atKCNJ13 potassium inwardly-rectifying channel, subfamily J, member 13-7e-040.0056

Performance on training data

 SensitivitySpecificity
ADENO0.989250.91667
NORMAL0.916670.98925

Performance on test data

 SensitivitySpecificity
ADENO0.934781
NORMAL10.93478

Predictions

 ClassADENONORMALPredictionn
CL2001031608AAADENO0.999390.00061 ADENO
CL2001031611AA (testset)ADENO0.999991e-05 ADENO
CL2001031612AAADENO0.99880.0012 ADENO
CL2001031613AAADENO0.944370.05563 ADENO
CL2001031615AAADENO10 ADENO
CL2001031616AAADENO0.999991e-05 ADENO
CL2001031618AA (testset)ADENO0.999946e-05 ADENO
CL2001031622AAADENO10 ADENO
CL2001031625AA (testset)ADENO10 ADENO
CL2001031627AAADENO0.999810.00019 ADENO
CL2001031628AAADENO10 ADENO
CL2001031629AAADENO10 ADENO
CL2001031630AAADENO10 ADENO
CL2001031631AAADENO10 ADENO
CL2001031632AAADENO10 ADENO
CL2001031634AAADENO10 ADENO
CL2001031635AAADENO10 ADENO
CL2001031636AAADENO0.999982e-05 ADENO
CL2001032002AAADENO10 ADENO
CL2001032005AAADENO10 ADENO
CL2001032008AAADENO10 ADENO
CL2001032009AA (testset)ADENO10 ADENO
CL2001032011AAADENO0.999370.00063 ADENO
CL2001032012AA (testset)ADENO0.999270.00073 ADENO
CL2001032013AA (testset)ADENO0.999340.00066 ADENO
CL2001032015AAADENO0.917860.08214 ADENO
CL2001032016AAADENO10 ADENO
CL2001032019AAADENO10 ADENO
CL2001032020AAADENO0.999928e-05 ADENO
CL2001032025AAADENO0.999973e-05 ADENO
CL2001032026AAADENO0.999790.00021 ADENO
CL2001032027AA (testset)ADENO0.998560.00144 ADENO
CL2001032030AA (testset)ADENO0.999991e-05 ADENO
CL2001032031AAADENO0.997780.00222 ADENO
CL2001032032AA (testset)ADENO0.999250.00075 ADENO
CL2001032034AA (testset)ADENO0.035080.96492 NORMAL
CL2001032036AAADENO0.99964e-04 ADENO
CL2001032103AAADENO0.999982e-05 ADENO
CL2001032104AA (testset)ADENO10 ADENO
CL2001032105AAADENO10 ADENO
CL2001032107AAADENO10 ADENO
CL2001032108AA (testset)ADENO10 ADENO
CL2001032109AAADENO0.295050.70495 NORMAL
CL2001032110AAADENO0.997950.00205 ADENO
CL2001032111AAADENO10 ADENO
CL2001032113AAADENO0.999982e-05 ADENO
CL2001032114AAADENO0.999937e-05 ADENO
CL2001032115AA (testset)ADENO10 ADENO
CL2001032116AA (testset)ADENO10 ADENO
CL2001032117AAADENO0.999982e-05 ADENO
CL2001032125AA (testset)ADENO10 ADENO
CL2001032130AAADENO10 ADENO
CL2001032132AAADENO10 ADENO
CL2001032134AA (testset)ADENO0.974170.02583 ADENO
CL2001032135AAADENO0.995670.00433 ADENO
CL2001032136AAADENO0.999991e-05 ADENO
CL2001032138AAADENO0.999937e-05 ADENO
CL2001032141AAADENO10 ADENO
CL2001032142AAADENO0.999890.00011 ADENO
CL2001032149AA (testset)ADENO0.998160.00184 ADENO
CL2001032155AA (testset)ADENO0.021350.97865 NORMAL
CL2001032156AAADENO0.999946e-05 ADENO
CL2001032211AA (testset)ADENO10 ADENO
CL2001032212AAADENO10 ADENO
CL2001032213AAADENO0.698610.30139 ADENO
CL2001032214AAADENO0.9910.009 ADENO
CL2001032229AAADENO0.999991e-05 ADENO
CL2001032232AA (testset)ADENO10 ADENO
CL2001032233AAADENO10 ADENO
CL2001032241AAADENO0.999991e-05 ADENO
CL2001032242AAADENO0.999991e-05 ADENO
CL2001032243AAADENO0.999991e-05 ADENO
CL2001032248AAADENO10 ADENO
CL2001032249AA (testset)ADENO10 ADENO
CL2001032252AAADENO10 ADENO
CL2001032254AAADENO10 ADENO
CL2001032255AAADENO10 ADENO
CL2001032259AAADENO10 ADENO
CL2001032301AA (testset)ADENO0.996240.00376 ADENO
CL2001032306AAADENO0.998660.00134 ADENO
CL2001032307AAADENO0.975350.02465 ADENO
CL2001032308AA (testset)ADENO0.999973e-05 ADENO
CL2001032309AAADENO10 ADENO
CL2001032310AA (testset)ADENO0.999991e-05 ADENO
CL2001032311AAADENO10 ADENO
CL2001032312AAADENO0.999991e-05 ADENO
CL2001032313AA (testset)ADENO0.999982e-05 ADENO
CL2001032314AA (testset)ADENO10 ADENO
CL2001032316AAADENO10 ADENO
CL2001032601AA (testset)ADENO10 ADENO
CL2001032602AA (testset)ADENO10 ADENO
CL2001032604AAADENO10 ADENO
CL2001032610AAADENO10 ADENO
CL2001032612AAADENO0.999991e-05 ADENO
CL2001032613AAADENO0.999991e-05 ADENO
CL2001032614AAADENO10 ADENO
CL2001032616AA (testset)ADENO0.99991e-04 ADENO
CL2001032617AA (testset)ADENO10 ADENO
CL2001032620AAADENO0.999991e-05 ADENO
CL2001032625AAADENO10 ADENO
CL2001032628AAADENO10 ADENO
CL2001032638AA (testset)ADENO0.999991e-05 ADENO
CL2001032640AAADENO0.999982e-05 ADENO
CL2001032643AA (testset)ADENO0.999919e-05 ADENO
CL2001032647AAADENO0.994630.00537 ADENO
CL2001032701AA (testset)ADENO10 ADENO
CL2001032702AAADENO0.999370.00063 ADENO
CL2001032703AA (testset)ADENO10 ADENO
CL2001032704AA (testset)ADENO0.999750.00025 ADENO
CL2001032706AAADENO0.999680.00032 ADENO
CL2001032709AAADENO0.999946e-05 ADENO
CL2001032716AAADENO0.999991e-05 ADENO
CL2001032717AAADENO0.999991e-05 ADENO
CL2001032729AAADENO10 ADENO
CL2001032730AAADENO10 ADENO
CL2001032733AA (testset)ADENO0.99964e-04 ADENO
CL2001032738AA (testset)ADENO0.999991e-05 ADENO
CL2001032742AAADENO10 ADENO
CL2001032746AAADENO0.999991e-05 ADENO
CL2001032747AAADENO10 ADENO
CL2001032833AA (testset)ADENO10 ADENO
CL2001032836AAADENO10 ADENO
CL2001032838AAADENO0.999937e-05 ADENO
CL2001032839AAADENO0.999955e-05 ADENO
CL2001032841AA (testset)ADENO10 ADENO
CL2001032842AAADENO10 ADENO
CL2001032843AA (testset)ADENO10 ADENO
CL2001032845AA (testset)ADENO0.999964e-05 ADENO
CL2001032846AAADENO10 ADENO
CL2001032848AA (testset)ADENO0.003770.99623 NORMAL
CL2001032856AAADENO10 ADENO
CL2001032857AAADENO0.999946e-05 ADENO
CL2001040305AA (testset)ADENO10 ADENO
CL2001040306AA (testset)ADENO0.999991e-05 ADENO
CL2001041708AA (testset)ADENO0.999982e-05 ADENO
CL2001041711AAADENO0.999991e-05 ADENO
CL2001041716AAADENO0.864620.13538 ADENO
CL2001042505AA (testset)ADENO10 ADENO
CL2001042506AAADENO0.999390.00061 ADENO
CL2001032010AA (testset)NORMAL0.306740.69326 NORMAL
CL2001032041AANORMAL3e-050.99997 NORMAL
CL2001032043AA (testset)NORMAL01 NORMAL
CL2001032045AANORMAL4e-050.99996 NORMAL
CL2001032046AANORMAL2e-050.99998 NORMAL
CL2001032102AANORMAL5e-050.99995 NORMAL
CL2001032128AA (testset)NORMAL3e-050.99997 NORMAL
CL2001032147AANORMAL1e-050.99999 NORMAL
CL2001032202AANORMAL0.000160.99984 NORMAL
CL2001032206AA (testset)NORMAL0.000640.99936 NORMAL
CL2001032220AANORMAL1e-050.99999 NORMAL
CL2001032256AANORMAL0.940960.05904 ADENO
CL2001032304AANORMAL0.000120.99988 NORMAL
CL2001032718AANORMAL01 NORMAL
CL2001032724AANORMAL0.013130.98687 NORMAL
CL2001032725AA (testset)NORMAL3e-050.99997 NORMAL
CL2001032727AANORMAL0.000340.99966 NORMAL

 


Generated by StAM on Tue Sep 7 17:18:38 2004