GO:0007517


GO:0007517

muscle development
(annotated genes)

Biological
Process

Parent node

This leaf node contains 105 genes

The following 76 of these are used in classification:

 SymbolGenenameADENO scoreother score
32542_atFHL1 four and a half LIM domains 1-0.17170.373
37363_atMTSS1 metastasis suppressor 1-0.16490.358
38077_atCOL6A3 collagen, type VI, alpha 30.1472-0.3196
36678_atTAGLN2 transgelin 20.1446-0.3141
36892_atITGA7 integrin, alpha 7-0.12580.2732
39069_atAEBP1 AE binding protein 10.1106-0.2401
40375_atEGR3 early growth response 3-0.11010.2391
38251_atMLC1SA myosin light chain 1 slow a-0.10810.2347
33348_atTCF12 transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)-0.10070.2188
40249_atACHE acetylcholinesterase (YT blood group)0.099-0.2151
767_atMYH11 myosin, heavy polypeptide 11, smooth muscle-0.09380.2037
32582_atMYH11 myosin, heavy polypeptide 11, smooth muscle-0.08230.1788
41747_s_atMEF2A MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)-0.08110.1761
35137_atMYOM1 myomesin 1 (skelemin) 185kDa-0.07640.166
41401_atCSRP2 cysteine and glycine-rich protein 2-0.07460.162
37407_s_atMYH11 myosin, heavy polypeptide 11, smooth muscle-0.07380.1603
34306_atMBNL1 muscleblind-like (Drosophila)0.069-0.1499
40004_atSIX1 sine oculis homeobox homolog 1 (Drosophila)-0.06790.1476
38037_atDTR diphtheria toxin receptor (heparin-binding epidermal growth factor-like growth factor)-0.06510.1415
774_g_atMYH11 myosin, heavy polypeptide 11, smooth muscle-0.06370.1382
39291_atPHKA1 phosphorylase kinase, alpha 1 (muscle)0.0601-0.1306
39101_atMYH2 myosin, heavy polypeptide 2, skeletal muscle, adult-0.05860.1272
35434_atMEF2D MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)0.0573-0.1244
41738_atCALD1 caldesmon 1-0.05720.1242
39063_atACTC actin, alpha, cardiac muscle-0.05360.1165
1197_atACTG2 actin, gamma 2, smooth muscle, enteric-0.05240.1138
40795_atTTN titin-0.05110.111
37377_i_atLMNA lamin A/C0.0478-0.1038
40488_atDMD dystrophin (muscular dystrophy, Duchenne and Becker types)-0.04640.1009
40796_atTTN titin-0.04330.0941
35387_r_atACHE acetylcholinesterase (YT blood group)0.0431-0.0937
41017_atMYBPH myosin binding protein H0.0423-0.0919
431_atCXCL10 chemokine (C-X-C motif) ligand 100.0398-0.0865
39095_atMYH7 myosin, heavy polypeptide 7, cardiac muscle, beta0.0394-0.0856
39085_atTNNC1 troponin C, slow-0.03890.0845
37691_atMEF2B MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)0.0381-0.0828
33993_atMYL6 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-0.03690.0802
41730_atMYL3 myosin, light polypeptide 3, alkali; ventricular, skeletal, slow0.0364-0.079
31421_atMYL4 myosin, light polypeptide 4, alkali; atrial, embryonic0.0357-0.0776
31830_s_atSMTN smoothelin0.0356-0.0774
37529_atCACNA1H calcium channel, voltage-dependent, alpha 1H subunit-0.0330.0718
36505_atCASQ2 calsequestrin 2 (cardiac muscle)-0.0330.0717
773_atMYH11 myosin, heavy polypeptide 11, smooth muscle-0.0320.0696
39301_atCAPN3 calpain 3, (p94)0.0294-0.0638
41378_atSGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)-0.02880.0625
40022_atFCMD Fukuyama type congenital muscular dystrophy (fukutin)-0.02830.0614
38737_atIGF1 insulin-like growth factor 1 (somatomedin C)0.0264-0.0574
40062_s_atMYL4 myosin, light polypeptide 4, alkali; atrial, embryonic0.0263-0.057
37540_atMYOM2 myomesin (M-protein) 2, 165kDa-0.02550.0553
37378_r_atLMNA lamin A/C0.022-0.0478
41731_g_atMYL3 myosin, light polypeptide 3, alkali; ventricular, skeletal, slow0.021-0.0456
984_g_atMAPK12 mitogen-activated protein kinase 12-0.02090.0455
32314_g_atTPM2 tropomyosin 2 (beta)0.0199-0.0432
1892_s_atTPM3 tropomyosin 30.0191-0.0415
32313_atTPM2 tropomyosin 2 (beta)0.0191-0.0415
38602_atMYH6 myosin, heavy polypeptide 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)0.019-0.0412
35239_atEMD emerin (Emery-Dreifuss muscular dystrophy)-0.01840.04
1975_s_atIGF1 insulin-like growth factor 1 (somatomedin C)0.0166-0.0361
40158_r_atMYL1 myosin, light polypeptide 1, alkali; skeletal, fast-0.01640.0357
37941_atMYBPC2 myosin binding protein C, fast type-0.01620.0353
1625_atIGF1 insulin-like growth factor 1 (somatomedin C)0.0162-0.0352
1501_atIGF1 insulin-like growth factor 1 (somatomedin C)0.0152-0.033
37712_g_atMEF2C MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)0.0134-0.0291
32312_atTPM2 tropomyosin 2 (beta)0.0115-0.0249
38540_atMRAS muscle RAS oncogene homolog-0.01080.0235
36792_atTPM1 tropomyosin 1 (alpha)0.0105-0.0228
39620_atPOU6F1 POU domain, class 6, transcription factor 1-0.01030.0224
38793_atTNNT2 troponin T2, cardiac0.0095-0.0206
38486_atTNNI1 troponin I, skeletal, slow0.0072-0.0156
33866_atTPM4 tropomyosin 40.007-0.0152
33482_atMYOD1 myogenic factor 30.0067-0.0146
983_atMAPK12 mitogen-activated protein kinase 120.0067-0.0145
36791_g_atTPM1 tropomyosin 1 (alpha)0.0052-0.0113
36920_atMTM1 myotubular myopathy 10.004-0.0087
37223_atSGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)-0.00350.0076
36662_atMYL7 myosin, light polypeptide 7, regulatory0.0012-0.0025

Performance on training data

 SensitivitySpecificity
ADENO0.913670.70312
other0.703120.91367

Performance on test data

 SensitivitySpecificity
ADENO0.913670.70312
other0.703120.91367

Predictions

 ClassADENOotherPredictionn
CL2001031606AA (testset)other0.700330.29967 ADENO
CL2001031607AA (testset)other0.069780.93022 other
CL2001031608AA (testset)ADENO0.289030.71097 other
CL2001031609AA (testset)other0.005770.99423 other
CL2001031611AA (testset)ADENO0.938270.06173 ADENO
CL2001031612AA (testset)ADENO0.54390.4561 ADENO
CL2001031613AA (testset)ADENO0.707860.29214 ADENO
CL2001031615AA (testset)ADENO0.964670.03533 ADENO
CL2001031616AA (testset)ADENO0.639540.36046 ADENO
CL2001031618AA (testset)ADENO0.837080.16292 ADENO
CL2001031620AA (testset)other0.804770.19523 ADENO
CL2001031621AA (testset)other0.13880.8612 other
CL2001031622AA (testset)ADENO0.781080.21892 ADENO
CL2001031625AA (testset)ADENO0.949040.05096 ADENO
CL2001031627AA (testset)ADENO0.924740.07526 ADENO
CL2001031628AA (testset)ADENO0.986390.01361 ADENO
CL2001031629AA (testset)ADENO0.989420.01058 ADENO
CL2001031630AA (testset)ADENO0.990250.00975 ADENO
CL2001031631AA (testset)ADENO0.986820.01318 ADENO
CL2001031632AA (testset)ADENO0.953490.04651 ADENO
CL2001031634AA (testset)ADENO0.713510.28649 ADENO
CL2001031635AA (testset)ADENO0.990210.00979 ADENO
CL2001031636AA (testset)ADENO0.991360.00864 ADENO
CL2001032002AA (testset)ADENO0.974490.02551 ADENO
CL2001032005AA (testset)ADENO0.82050.1795 ADENO
CL2001032008AA (testset)ADENO0.991910.00809 ADENO
CL2001032009AA (testset)ADENO0.981250.01875 ADENO
CL2001032010AA (testset)other0.636730.36327 ADENO
CL2001032011AA (testset)ADENO0.978140.02186 ADENO
CL2001032012AA (testset)ADENO0.935120.06488 ADENO
CL2001032013AA (testset)ADENO0.933250.06675 ADENO
CL2001032015AA (testset)ADENO0.286530.71347 other
CL2001032016AA (testset)ADENO0.990570.00943 ADENO
CL2001032019AA (testset)ADENO0.984520.01548 ADENO
CL2001032020AA (testset)ADENO0.991780.00822 ADENO
CL2001032025AA (testset)ADENO0.880050.11995 ADENO
CL2001032026AA (testset)ADENO0.666080.33392 ADENO
CL2001032027AA (testset)ADENO0.908980.09102 ADENO
CL2001032030AA (testset)ADENO0.988470.01153 ADENO
CL2001032031AA (testset)ADENO0.497860.50214 other
CL2001032032AA (testset)ADENO0.798260.20174 ADENO
CL2001032034AA (testset)ADENO0.119680.88032 other
CL2001032036AA (testset)ADENO0.611450.38855 ADENO
CL2001032041AA (testset)other0.008150.99185 other
CL2001032043AA (testset)other0.010350.98965 other
CL2001032044AA (testset)other0.127390.87261 other
CL2001032045AA (testset)other0.070360.92964 other
CL2001032046AA (testset)other0.090480.90952 other
CL2001032101AA (testset)other0.04650.9535 other
CL2001032102AA (testset)other0.181220.81878 other
CL2001032103AA (testset)ADENO0.928030.07197 ADENO
CL2001032104AA (testset)ADENO0.996230.00377 ADENO
CL2001032105AA (testset)ADENO0.966150.03385 ADENO
CL2001032107AA (testset)ADENO0.96720.0328 ADENO
CL2001032108AA (testset)ADENO0.906320.09368 ADENO
CL2001032109AA (testset)ADENO0.417250.58275 other
CL2001032110AA (testset)ADENO0.870930.12907 ADENO
CL2001032111AA (testset)ADENO0.857340.14266 ADENO
CL2001032113AA (testset)ADENO0.945970.05403 ADENO
CL2001032114AA (testset)ADENO0.985650.01435 ADENO
CL2001032115AA (testset)ADENO0.903550.09645 ADENO
CL2001032116AA (testset)ADENO0.989450.01055 ADENO
CL2001032117AA (testset)ADENO0.6610.339 ADENO
CL2001032121AA (testset)other0.570560.42944 ADENO
CL2001032122AA (testset)other0.861340.13866 ADENO
CL2001032124AA (testset)other0.179490.82051 other
CL2001032125AA (testset)ADENO0.58570.4143 ADENO
CL2001032127AA (testset)other0.080290.91971 other
CL2001032128AA (testset)other0.015170.98483 other
CL2001032129AA (testset)other0.38270.6173 other
CL2001032130AA (testset)ADENO0.998780.00122 ADENO
CL2001032132AA (testset)ADENO0.922560.07744 ADENO
CL2001032134AA (testset)ADENO0.246620.75338 other
CL2001032135AA (testset)ADENO0.720220.27978 ADENO
CL2001032136AA (testset)ADENO0.851460.14854 ADENO
CL2001032138AA (testset)ADENO0.964890.03511 ADENO
CL2001032141AA (testset)ADENO0.983860.01614 ADENO
CL2001032142AA (testset)ADENO0.589510.41049 ADENO
CL2001032144AA (testset)other0.600760.39924 ADENO
CL2001032145AA (testset)other0.079140.92086 other
CL2001032147AA (testset)other0.050030.94997 other
CL2001032149AA (testset)ADENO0.886230.11377 ADENO
CL2001032151AA (testset)other0.054940.94506 other
CL2001032152AA (testset)other0.066580.93342 other
CL2001032153AA (testset)other0.026280.97372 other
CL2001032155AA (testset)ADENO0.594390.40561 ADENO
CL2001032156AA (testset)ADENO0.06510.9349 other
CL2001032202AA (testset)other0.018310.98169 other
CL2001032206AA (testset)other0.033730.96627 other
CL2001032207AA (testset)other0.527710.47229 ADENO
CL2001032209AA (testset)other0.698390.30161 ADENO
CL2001032210AA (testset)other0.05550.9445 other
CL2001032211AA (testset)ADENO0.984450.01555 ADENO
CL2001032212AA (testset)ADENO0.865860.13414 ADENO
CL2001032213AA (testset)ADENO0.296870.70313 other
CL2001032214AA (testset)ADENO0.167460.83254 other
CL2001032217AA (testset)other0.35410.6459 other
CL2001032218AA (testset)other0.765640.23436 ADENO
CL2001032219AA (testset)other0.125440.87456 other
CL2001032220AA (testset)other0.206080.79392 other
CL2001032222AA (testset)other0.828390.17161 ADENO
CL2001032229AA (testset)ADENO0.93550.0645 ADENO
CL2001032231AA (testset)other0.891190.10881 ADENO
CL2001032232AA (testset)ADENO0.962610.03739 ADENO
CL2001032233AA (testset)ADENO0.992290.00771 ADENO
CL2001032238AA (testset)other0.344980.65502 other
CL2001032239AA (testset)other0.344420.65558 other
CL2001032240AA (testset)other0.936330.06367 ADENO
CL2001032241AA (testset)ADENO0.967720.03228 ADENO
CL2001032242AA (testset)ADENO0.993040.00696 ADENO
CL2001032243AA (testset)ADENO0.821660.17834 ADENO
CL2001032248AA (testset)ADENO0.993430.00657 ADENO
CL2001032249AA (testset)ADENO0.708160.29184 ADENO
CL2001032252AA (testset)ADENO0.965090.03491 ADENO
CL2001032254AA (testset)ADENO0.969670.03033 ADENO
CL2001032255AA (testset)ADENO0.992410.00759 ADENO
CL2001032256AA (testset)other0.563710.43629 ADENO
CL2001032259AA (testset)ADENO0.975320.02468 ADENO
CL2001032260AA (testset)other0.196070.80393 other
CL2001032301AA (testset)ADENO0.785620.21438 ADENO
CL2001032304AA (testset)other0.341470.65853 other
CL2001032305AA (testset)other0.915010.08499 ADENO
CL2001032306AA (testset)ADENO0.427250.57275 other
CL2001032307AA (testset)ADENO0.364330.63567 other
CL2001032308AA (testset)ADENO0.979650.02035 ADENO
CL2001032309AA (testset)ADENO0.966470.03353 ADENO
CL2001032310AA (testset)ADENO0.885490.11451 ADENO
CL2001032311AA (testset)ADENO0.976620.02338 ADENO
CL2001032312AA (testset)ADENO0.955730.04427 ADENO
CL2001032313AA (testset)ADENO0.729920.27008 ADENO
CL2001032314AA (testset)ADENO0.957490.04251 ADENO
CL2001032316AA (testset)ADENO0.962280.03772 ADENO
CL2001032601AA (testset)ADENO0.980540.01946 ADENO
CL2001032602AA (testset)ADENO0.973670.02633 ADENO
CL2001032604AA (testset)ADENO0.942570.05743 ADENO
CL2001032607AA (testset)other0.019730.98027 other
CL2001032608AA (testset)other0.669170.33083 ADENO
CL2001032610AA (testset)ADENO0.947340.05266 ADENO
CL2001032612AA (testset)ADENO0.726780.27322 ADENO
CL2001032613AA (testset)ADENO0.988040.01196 ADENO
CL2001032614AA (testset)ADENO0.961090.03891 ADENO
CL2001032616AA (testset)ADENO0.807030.19297 ADENO
CL2001032617AA (testset)ADENO0.809670.19033 ADENO
CL2001032620AA (testset)ADENO0.916330.08367 ADENO
CL2001032625AA (testset)ADENO0.958150.04185 ADENO
CL2001032627AA (testset)other0.879470.12053 ADENO
CL2001032628AA (testset)ADENO0.958140.04186 ADENO
CL2001032629AA (testset)other0.11530.8847 other
CL2001032630AA (testset)other0.142020.85798 other
CL2001032632AA (testset)other0.573450.42655 ADENO
CL2001032638AA (testset)ADENO0.757270.24273 ADENO
CL2001032640AA (testset)ADENO0.981310.01869 ADENO
CL2001032643AA (testset)ADENO0.961190.03881 ADENO
CL2001032644AA (testset)other0.063580.93642 other
CL2001032647AA (testset)ADENO0.912390.08761 ADENO
CL2001032701AA (testset)ADENO0.960580.03942 ADENO
CL2001032702AA (testset)ADENO0.92560.0744 ADENO
CL2001032703AA (testset)ADENO0.971520.02848 ADENO
CL2001032704AA (testset)ADENO0.951620.04838 ADENO
CL2001032706AA (testset)ADENO0.937920.06208 ADENO
CL2001032709AA (testset)ADENO0.914790.08521 ADENO
CL2001032716AA (testset)ADENO0.907160.09284 ADENO
CL2001032717AA (testset)ADENO0.919230.08077 ADENO
CL2001032718AA (testset)other0.012250.98775 other
CL2001032719AA (testset)other0.867830.13217 ADENO
CL2001032720AA (testset)other0.115360.88464 other
CL2001032722AA (testset)other0.097840.90216 other
CL2001032724AA (testset)other0.612660.38734 ADENO
CL2001032725AA (testset)other0.065660.93434 other
CL2001032727AA (testset)other0.114580.88542 other
CL2001032729AA (testset)ADENO0.985490.01451 ADENO
CL2001032730AA (testset)ADENO0.949030.05097 ADENO
CL2001032732AA (testset)other0.414060.58594 other
CL2001032733AA (testset)ADENO0.920160.07984 ADENO
CL2001032738AA (testset)ADENO0.987820.01218 ADENO
CL2001032742AA (testset)ADENO0.86920.1308 ADENO
CL2001032746AA (testset)ADENO0.948530.05147 ADENO
CL2001032747AA (testset)ADENO0.836860.16314 ADENO
CL2001032833AA (testset)ADENO0.977430.02257 ADENO
CL2001032836AA (testset)ADENO0.978740.02126 ADENO
CL2001032838AA (testset)ADENO0.971050.02895 ADENO
CL2001032839AA (testset)ADENO0.675810.32419 ADENO
CL2001032841AA (testset)ADENO0.965150.03485 ADENO
CL2001032842AA (testset)ADENO0.902890.09711 ADENO
CL2001032843AA (testset)ADENO0.974610.02539 ADENO
CL2001032845AA (testset)ADENO0.941540.05846 ADENO
CL2001032846AA (testset)ADENO0.981860.01814 ADENO
CL2001032847AA (testset)other0.036630.96337 other
CL2001032848AA (testset)ADENO0.080930.91907 other
CL2001032850AA (testset)other0.048590.95141 other
CL2001032853AA (testset)other0.481560.51844 other
CL2001032854AA (testset)other0.25320.7468 other
CL2001032856AA (testset)ADENO0.966150.03385 ADENO
CL2001032857AA (testset)ADENO0.956110.04389 ADENO
CL2001032860AA (testset)other0.038190.96181 other
CL2001040305AA (testset)ADENO0.976790.02321 ADENO
CL2001040306AA (testset)ADENO0.953330.04667 ADENO
CL2001041708AA (testset)ADENO0.986510.01349 ADENO
CL2001041711AA (testset)ADENO0.917020.08298 ADENO
CL2001041716AA (testset)ADENO0.527860.47214 ADENO
CL2001042501AA (testset)other0.24110.7589 other
CL2001042505AA (testset)ADENO0.897780.10222 ADENO
CL2001042506AA (testset)ADENO0.787040.21296 ADENO

 


Generated by StAM on Tue Sep 7 18:09:33 2004