GO:0007229


GO:0007229

integrin-mediated signaling pathway
(annotated genes)

Biological
Process

Parent node

This leaf node contains 53 genes

The following 43 of these are used in classification:

 SymbolGenenameADENO scoreother score
32780_atBPAG1 bullous pemphigoid antigen 1, 230/240kDa-0.23010.4997
884_atITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)0.1586-0.3446
885_g_atITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)0.1579-0.3429
40304_atBPAG1 bullous pemphigoid antigen 1, 230/240kDa-0.15710.3411
41266_atITGA6 integrin, alpha 6-0.13870.3012
36892_atITGA7 integrin, alpha 7-0.11270.2448
881_atITGB6 integrin, beta 60.0983-0.2135
40681_atITGBL1 integrin, beta-like 1 (with EGF-like repeat domains)0.0977-0.2123
37918_atITGB2 integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1; macrophage antigen 1 (mac-1) beta subunit)0.0946-0.2054
37890_atCD47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer)0.0895-0.1943
33410_atITGA6 integrin, alpha 6-0.08410.1826
406_atITGB4 integrin, beta 40.0809-0.1756
33411_g_atITGA6 integrin, alpha 6-0.06760.1469
32808_atITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)0.0523-0.1136
2077_atITGA6 integrin, alpha 6-0.04040.0878
41481_atITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)0.04-0.087
39754_atITGB5 integrin, beta 50.0396-0.086
39071_atITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)0.0393-0.0854
38746_atITGB4 integrin, beta 40.0347-0.0753
38533_s_atITGAM integrin, alpha M (complement component receptor 3, alpha; also known as CD11b (p170), macrophage antigen alpha polypeptide)0.0322-0.0698
41005_atITGA8 integrin, alpha 8-0.03210.0697
37484_atITGA1 integrin, alpha 10.0307-0.0666
1978_atITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)0.0304-0.066
40643_atITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B)-0.02740.0595
37952_atITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)0.0255-0.0555
38534_atITGAM integrin, alpha M (complement component receptor 3, alpha; also known as CD11b (p170), macrophage antigen alpha polypeptide)0.0238-0.0517
37889_atCD47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer)0.0233-0.0506
2032_s_atITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)0.0215-0.0468
2058_s_atITGB5 integrin, beta 50.0213-0.0462
36709_atITGAX integrin, alpha X (antigen CD11C (p150), alpha polypeptide)0.0179-0.0388
35948_atITGA9 integrin, alpha 90.0175-0.038
33941_atADAM11 a disintegrin and metalloproteinase domain 110.0147-0.0319
120_atITGA1 integrin, alpha 10.0136-0.0295
852_atITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)-0.01140.0248
1508_atITGA9 integrin, alpha 90.0098-0.0212
38547_atITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)0.0069-0.0151
1176_atITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)-0.00440.0095
312_s_atPTK2 PTK2 protein tyrosine kinase 20.0039-0.0085
889_atITGB8 integrin, beta 8-0.0020.0043
37574_atNEDD9 neural precursor cell expressed, developmentally down-regulated 9-0.00140.0031
35731_atITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)0.0012-0.0026
257_atITGAV integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)0.001-0.0022
34974_atADAMDEC1 ADAM-like, decysin 18e-04-0.0017

Performance on training data

 SensitivitySpecificity
ADENO0.928060.6875
other0.68750.92806

Performance on test data

 SensitivitySpecificity
ADENO0.928060.6875
other0.68750.92806

Predictions

 ClassADENOotherPredictionn
CL2001031606AA (testset)other0.564770.43523 ADENO
CL2001031607AA (testset)other0.501150.49885 ADENO
CL2001031608AA (testset)ADENO0.79610.2039 ADENO
CL2001031609AA (testset)other0.21450.7855 other
CL2001031611AA (testset)ADENO0.916990.08301 ADENO
CL2001031612AA (testset)ADENO0.411080.58892 other
CL2001031613AA (testset)ADENO0.986540.01346 ADENO
CL2001031615AA (testset)ADENO0.806530.19347 ADENO
CL2001031616AA (testset)ADENO0.803850.19615 ADENO
CL2001031618AA (testset)ADENO0.84120.1588 ADENO
CL2001031620AA (testset)other0.672740.32726 ADENO
CL2001031621AA (testset)other0.049420.95058 other
CL2001031622AA (testset)ADENO0.578110.42189 ADENO
CL2001031625AA (testset)ADENO0.926960.07304 ADENO
CL2001031627AA (testset)ADENO0.970530.02947 ADENO
CL2001031628AA (testset)ADENO0.980550.01945 ADENO
CL2001031629AA (testset)ADENO0.951820.04818 ADENO
CL2001031630AA (testset)ADENO0.959740.04026 ADENO
CL2001031631AA (testset)ADENO0.98750.0125 ADENO
CL2001031632AA (testset)ADENO0.833910.16609 ADENO
CL2001031634AA (testset)ADENO0.559020.44098 ADENO
CL2001031635AA (testset)ADENO0.737560.26244 ADENO
CL2001031636AA (testset)ADENO0.730250.26975 ADENO
CL2001032002AA (testset)ADENO0.868960.13104 ADENO
CL2001032005AA (testset)ADENO0.613030.38697 ADENO
CL2001032008AA (testset)ADENO0.803870.19613 ADENO
CL2001032009AA (testset)ADENO0.959920.04008 ADENO
CL2001032010AA (testset)other0.857040.14296 ADENO
CL2001032011AA (testset)ADENO0.825170.17483 ADENO
CL2001032012AA (testset)ADENO0.932740.06726 ADENO
CL2001032013AA (testset)ADENO0.69080.3092 ADENO
CL2001032015AA (testset)ADENO0.629440.37056 ADENO
CL2001032016AA (testset)ADENO0.975440.02456 ADENO
CL2001032019AA (testset)ADENO0.974240.02576 ADENO
CL2001032020AA (testset)ADENO0.991980.00802 ADENO
CL2001032025AA (testset)ADENO0.86010.1399 ADENO
CL2001032026AA (testset)ADENO0.822550.17745 ADENO
CL2001032027AA (testset)ADENO0.986710.01329 ADENO
CL2001032030AA (testset)ADENO0.685740.31426 ADENO
CL2001032031AA (testset)ADENO0.87030.1297 ADENO
CL2001032032AA (testset)ADENO0.91350.0865 ADENO
CL2001032034AA (testset)ADENO0.682620.31738 ADENO
CL2001032036AA (testset)ADENO0.846010.15399 ADENO
CL2001032041AA (testset)other0.222510.77749 other
CL2001032043AA (testset)other0.38820.6118 other
CL2001032044AA (testset)other0.305740.69426 other
CL2001032045AA (testset)other0.429560.57044 other
CL2001032046AA (testset)other0.51990.4801 ADENO
CL2001032101AA (testset)other0.079880.92012 other
CL2001032102AA (testset)other0.620380.37962 ADENO
CL2001032103AA (testset)ADENO0.78410.2159 ADENO
CL2001032104AA (testset)ADENO0.916140.08386 ADENO
CL2001032105AA (testset)ADENO0.42410.5759 other
CL2001032107AA (testset)ADENO0.900950.09905 ADENO
CL2001032108AA (testset)ADENO0.858630.14137 ADENO
CL2001032109AA (testset)ADENO0.690470.30953 ADENO
CL2001032110AA (testset)ADENO0.970680.02932 ADENO
CL2001032111AA (testset)ADENO0.835660.16434 ADENO
CL2001032113AA (testset)ADENO0.775350.22465 ADENO
CL2001032114AA (testset)ADENO0.995070.00493 ADENO
CL2001032115AA (testset)ADENO0.786280.21372 ADENO
CL2001032116AA (testset)ADENO0.977290.02271 ADENO
CL2001032117AA (testset)ADENO0.980250.01975 ADENO
CL2001032121AA (testset)other0.589030.41097 ADENO
CL2001032122AA (testset)other0.244580.75542 other
CL2001032124AA (testset)other0.160220.83978 other
CL2001032125AA (testset)ADENO0.281890.71811 other
CL2001032127AA (testset)other0.365930.63407 other
CL2001032128AA (testset)other0.300130.69987 other
CL2001032129AA (testset)other0.161840.83816 other
CL2001032130AA (testset)ADENO0.957920.04208 ADENO
CL2001032132AA (testset)ADENO0.947670.05233 ADENO
CL2001032134AA (testset)ADENO0.85120.1488 ADENO
CL2001032135AA (testset)ADENO0.977310.02269 ADENO
CL2001032136AA (testset)ADENO0.82070.1793 ADENO
CL2001032138AA (testset)ADENO0.992780.00722 ADENO
CL2001032141AA (testset)ADENO0.949610.05039 ADENO
CL2001032142AA (testset)ADENO0.15280.8472 other
CL2001032144AA (testset)other0.532980.46702 ADENO
CL2001032145AA (testset)other0.385690.61431 other
CL2001032147AA (testset)other0.513830.48617 ADENO
CL2001032149AA (testset)ADENO0.993710.00629 ADENO
CL2001032151AA (testset)other0.259020.74098 other
CL2001032152AA (testset)other0.364690.63531 other
CL2001032153AA (testset)other0.02130.9787 other
CL2001032155AA (testset)ADENO0.962680.03732 ADENO
CL2001032156AA (testset)ADENO0.401930.59807 other
CL2001032202AA (testset)other0.441620.55838 other
CL2001032206AA (testset)other0.566710.43329 ADENO
CL2001032207AA (testset)other0.26690.7331 other
CL2001032209AA (testset)other0.059590.94041 other
CL2001032210AA (testset)other0.091120.90888 other
CL2001032211AA (testset)ADENO0.91510.0849 ADENO
CL2001032212AA (testset)ADENO0.784190.21581 ADENO
CL2001032213AA (testset)ADENO0.475350.52465 other
CL2001032214AA (testset)ADENO0.867290.13271 ADENO
CL2001032217AA (testset)other0.435340.56466 other
CL2001032218AA (testset)other0.592740.40726 ADENO
CL2001032219AA (testset)other0.141320.85868 other
CL2001032220AA (testset)other0.620110.37989 ADENO
CL2001032222AA (testset)other0.151560.84844 other
CL2001032229AA (testset)ADENO0.863410.13659 ADENO
CL2001032231AA (testset)other0.387860.61214 other
CL2001032232AA (testset)ADENO0.993850.00615 ADENO
CL2001032233AA (testset)ADENO0.974470.02553 ADENO
CL2001032238AA (testset)other0.476160.52384 other
CL2001032239AA (testset)other0.598250.40175 ADENO
CL2001032240AA (testset)other0.365390.63461 other
CL2001032241AA (testset)ADENO0.884760.11524 ADENO
CL2001032242AA (testset)ADENO0.990960.00904 ADENO
CL2001032243AA (testset)ADENO0.929820.07018 ADENO
CL2001032248AA (testset)ADENO0.978380.02162 ADENO
CL2001032249AA (testset)ADENO0.952830.04717 ADENO
CL2001032252AA (testset)ADENO0.950850.04915 ADENO
CL2001032254AA (testset)ADENO0.97970.0203 ADENO
CL2001032255AA (testset)ADENO0.825510.17449 ADENO
CL2001032256AA (testset)other0.619220.38078 ADENO
CL2001032259AA (testset)ADENO0.613660.38634 ADENO
CL2001032260AA (testset)other0.450150.54985 other
CL2001032301AA (testset)ADENO0.509730.49027 ADENO
CL2001032304AA (testset)other0.791260.20874 ADENO
CL2001032305AA (testset)other0.278290.72171 other
CL2001032306AA (testset)ADENO0.864760.13524 ADENO
CL2001032307AA (testset)ADENO0.971830.02817 ADENO
CL2001032308AA (testset)ADENO0.568740.43126 ADENO
CL2001032309AA (testset)ADENO0.83390.1661 ADENO
CL2001032310AA (testset)ADENO0.732210.26779 ADENO
CL2001032311AA (testset)ADENO0.883430.11657 ADENO
CL2001032312AA (testset)ADENO0.861420.13858 ADENO
CL2001032313AA (testset)ADENO0.884390.11561 ADENO
CL2001032314AA (testset)ADENO0.644950.35505 ADENO
CL2001032316AA (testset)ADENO0.904090.09591 ADENO
CL2001032601AA (testset)ADENO0.889670.11033 ADENO
CL2001032602AA (testset)ADENO0.826010.17399 ADENO
CL2001032604AA (testset)ADENO0.937810.06219 ADENO
CL2001032607AA (testset)other0.20160.7984 other
CL2001032608AA (testset)other0.155330.84467 other
CL2001032610AA (testset)ADENO0.697230.30277 ADENO
CL2001032612AA (testset)ADENO0.445540.55446 other
CL2001032613AA (testset)ADENO0.926350.07365 ADENO
CL2001032614AA (testset)ADENO0.861690.13831 ADENO
CL2001032616AA (testset)ADENO0.816140.18386 ADENO
CL2001032617AA (testset)ADENO0.927310.07269 ADENO
CL2001032620AA (testset)ADENO0.955440.04456 ADENO
CL2001032625AA (testset)ADENO0.83410.1659 ADENO
CL2001032627AA (testset)other0.451370.54863 other
CL2001032628AA (testset)ADENO0.968530.03147 ADENO
CL2001032629AA (testset)other0.479060.52094 other
CL2001032630AA (testset)other0.264450.73555 other
CL2001032632AA (testset)other0.569780.43022 ADENO
CL2001032638AA (testset)ADENO0.468180.53182 other
CL2001032640AA (testset)ADENO0.980.02 ADENO
CL2001032643AA (testset)ADENO0.869030.13097 ADENO
CL2001032644AA (testset)other0.036150.96385 other
CL2001032647AA (testset)ADENO0.8760.124 ADENO
CL2001032701AA (testset)ADENO0.954380.04562 ADENO
CL2001032702AA (testset)ADENO0.945680.05432 ADENO
CL2001032703AA (testset)ADENO0.968650.03135 ADENO
CL2001032704AA (testset)ADENO0.933790.06621 ADENO
CL2001032706AA (testset)ADENO0.956520.04348 ADENO
CL2001032709AA (testset)ADENO0.992180.00782 ADENO
CL2001032716AA (testset)ADENO0.762510.23749 ADENO
CL2001032717AA (testset)ADENO0.620990.37901 ADENO
CL2001032718AA (testset)other0.491580.50842 other
CL2001032719AA (testset)other0.73330.2667 ADENO
CL2001032720AA (testset)other0.460380.53962 other
CL2001032722AA (testset)other0.157520.84248 other
CL2001032724AA (testset)other0.759750.24025 ADENO
CL2001032725AA (testset)other0.548710.45129 ADENO
CL2001032727AA (testset)other0.484740.51526 other
CL2001032729AA (testset)ADENO0.971780.02822 ADENO
CL2001032730AA (testset)ADENO0.82750.1725 ADENO
CL2001032732AA (testset)other0.454910.54509 other
CL2001032733AA (testset)ADENO0.916860.08314 ADENO
CL2001032738AA (testset)ADENO0.928450.07155 ADENO
CL2001032742AA (testset)ADENO0.662440.33756 ADENO
CL2001032746AA (testset)ADENO0.91490.0851 ADENO
CL2001032747AA (testset)ADENO0.930880.06912 ADENO
CL2001032833AA (testset)ADENO0.817890.18211 ADENO
CL2001032836AA (testset)ADENO0.804720.19528 ADENO
CL2001032838AA (testset)ADENO0.851980.14802 ADENO
CL2001032839AA (testset)ADENO0.677420.32258 ADENO
CL2001032841AA (testset)ADENO0.948870.05113 ADENO
CL2001032842AA (testset)ADENO0.804750.19525 ADENO
CL2001032843AA (testset)ADENO0.957790.04221 ADENO
CL2001032845AA (testset)ADENO0.819730.18027 ADENO
CL2001032846AA (testset)ADENO0.935210.06479 ADENO
CL2001032847AA (testset)other0.109420.89058 other
CL2001032848AA (testset)ADENO0.476770.52323 other
CL2001032850AA (testset)other0.182530.81747 other
CL2001032853AA (testset)other0.197350.80265 other
CL2001032854AA (testset)other0.574830.42517 ADENO
CL2001032856AA (testset)ADENO0.88110.1189 ADENO
CL2001032857AA (testset)ADENO0.893060.10694 ADENO
CL2001032860AA (testset)other0.092810.90719 other
CL2001040305AA (testset)ADENO0.604150.39585 ADENO
CL2001040306AA (testset)ADENO0.852110.14789 ADENO
CL2001041708AA (testset)ADENO0.841040.15896 ADENO
CL2001041711AA (testset)ADENO0.929690.07031 ADENO
CL2001041716AA (testset)ADENO0.939070.06093 ADENO
CL2001042501AA (testset)other0.203510.79649 other
CL2001042505AA (testset)ADENO0.230390.76961 other
CL2001042506AA (testset)ADENO0.501870.49813 ADENO

 


Generated by StAM on Tue Sep 7 18:09:43 2004