GO:0007156


GO:0007156

homophilic cell adhesion
(annotated genes)

Biological
Process

Parent node

This leaf node contains 68 genes

The following 53 of these are used in classification:

 SymbolGenenameADENO scoreother score
657_atPCDHGC3 protocadherin gamma subfamily C, 3-0.23290.5058
34730_g_atTRO trophinin-0.22830.4958
36101_s_atVEGF vascular endothelial growth factor0.2185-0.4746
2053_atCDH2 cadherin 2, type 1, N-cadherin (neuronal)-0.21420.4653
41498_atCLSTN1 calsyntenin 1-0.19560.4248
897_atPKD1 polycystic kidney disease 1 (autosomal dominant)-0.18480.4014
36499_atCELSR2 cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)-0.17720.3848
1953_atVEGF vascular endothelial growth factor0.1703-0.3698
36100_atVEGF vascular endothelial growth factor0.1566-0.3401
33693_atDSG3 desmoglein 3 (pemphigus vulgaris antigen)-0.15360.3335
483_g_atCDH13 cadherin 13, H-cadherin (heart)-0.14540.3157
36892_atITGA7 integrin, alpha 7-0.12760.2772
2054_g_atCDH2 cadherin 2, type 1, N-cadherin (neuronal)-0.12370.2686
39878_atPCDH9 protocadherin 9-0.12040.2615
38202_atFAT2 FAT tumor suppressor homolog 2 (Drosophila)-0.10880.2364
1296_atCDH15 cadherin 15, M-cadherin (myotubule)0.0991-0.2152
36976_atCDH11 cadherin 11, type 2, OB-cadherin (osteoblast)0.0947-0.2056
32417_atDSC3 desmocollin 3-0.09110.1978
977_s_atCDH1 cadherin 1, type 1, E-cadherin (epithelial)0.0869-0.1887
40454_atFAT FAT tumor suppressor homolog 1 (Drosophila)-0.08630.1874
41423_atCLSTN3 calsyntenin 3-0.08590.1866
2087_s_atCDH11 cadherin 11, type 2, OB-cadherin (osteoblast)0.0831-0.1806
482_atCDH13 cadherin 13, H-cadherin (heart)-0.07610.1654
40020_atCELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)-0.07580.1647
34986_atEVA1 epithelial V-like antigen 10.0711-0.1544
37196_atCDH5 cadherin 5, type 2, VE-cadherin (vascular epithelium)-0.06650.1445
34729_atTRO trophinin-0.06210.135
36367_atPCDH11X protocadherin 11 X-linked-0.06210.1348
32368_atPCDH8 protocadherin 8-0.06160.1339
2073_s_atCDH13 cadherin 13, H-cadherin (heart)-0.05490.1191
1620_atCDH6 cadherin 6, type 2, K-cadherin (fetal kidney)-0.05450.1183
32808_atITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)0.0518-0.1124
2082_s_atCDH1 cadherin 1, type 1, E-cadherin (epithelial)0.0456-0.0991
39488_atPCDH9 protocadherin 9-0.04020.0873
37092_atPCDHAC1 protocadherin alpha subfamily C, 1-0.03960.0861
35115_atCDH22 cadherin-like 22-0.03740.0812
41660_atCELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)0.0333-0.0724
41534_atPCDH7 BH-protocadherin (brain-heart)0.0319-0.0693
39302_atDSC2 desmocollin 2-0.02640.0574
32266_atCDH12 cadherin 12, type 2 (N-cadherin 2)-0.02420.0526
34922_atCDH19 cadherin 19, type 2-0.02290.0496
37562_atPCDH1 protocadherin 1 (cadherin-like 1)0.0205-0.0445
40736_atCDH17 cadherin 17, LI cadherin (liver-intestine)0.0203-0.0441
1745_atRET ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease)-0.01850.0402
34480_atCDH16 cadherin 16, KSP-cadherin0.0184-0.04
35609_atPCDHGA8 protocadherin gamma subfamily A, 8-0.01610.0349
34619_atDSC1 desmocollin 1-0.01230.0267
1689_atPCDH16 protocadherin 16 dachsous-like (Drosophila)0.011-0.024
33468_atDSG2 desmoglein 20.009-0.0196
35678_atPCDH7 BH-protocadherin (brain-heart)0.0078-0.017
173_atCDH18 cadherin 18, type 20.0034-0.0075
1483_atCDH4 cadherin 4, type 1, R-cadherin (retinal)-0.00220.0049
2072_atCDH12 cadherin 12, type 2 (N-cadherin 2)-0.00150.0032

Performance on training data

 SensitivitySpecificity
ADENO0.964030.75
other0.750.96403

Performance on test data

 SensitivitySpecificity
ADENO0.964030.75
other0.750.96403

Predictions

 ClassADENOotherPredictionn
CL2001031606AA (testset)other0.89860.1014 ADENO
CL2001031607AA (testset)other0.066180.93382 other
CL2001031608AA (testset)ADENO0.90830.0917 ADENO
CL2001031609AA (testset)other1e-050.99999 other
CL2001031611AA (testset)ADENO0.969090.03091 ADENO
CL2001031612AA (testset)ADENO0.987910.01209 ADENO
CL2001031613AA (testset)ADENO0.993210.00679 ADENO
CL2001031615AA (testset)ADENO0.982940.01706 ADENO
CL2001031616AA (testset)ADENO0.941570.05843 ADENO
CL2001031618AA (testset)ADENO0.851660.14834 ADENO
CL2001031620AA (testset)other0.386120.61388 other
CL2001031621AA (testset)other0.53780.4622 ADENO
CL2001031622AA (testset)ADENO0.954950.04505 ADENO
CL2001031625AA (testset)ADENO0.997960.00204 ADENO
CL2001031627AA (testset)ADENO0.995870.00413 ADENO
CL2001031628AA (testset)ADENO0.999680.00032 ADENO
CL2001031629AA (testset)ADENO0.953270.04673 ADENO
CL2001031630AA (testset)ADENO0.999010.00099 ADENO
CL2001031631AA (testset)ADENO0.999460.00054 ADENO
CL2001031632AA (testset)ADENO0.657150.34285 ADENO
CL2001031634AA (testset)ADENO0.987440.01256 ADENO
CL2001031635AA (testset)ADENO0.98430.0157 ADENO
CL2001031636AA (testset)ADENO0.982790.01721 ADENO
CL2001032002AA (testset)ADENO0.959570.04043 ADENO
CL2001032005AA (testset)ADENO0.659420.34058 ADENO
CL2001032008AA (testset)ADENO0.996120.00388 ADENO
CL2001032009AA (testset)ADENO0.998890.00111 ADENO
CL2001032010AA (testset)other0.854080.14592 ADENO
CL2001032011AA (testset)ADENO0.913110.08689 ADENO
CL2001032012AA (testset)ADENO0.986350.01365 ADENO
CL2001032013AA (testset)ADENO0.573260.42674 ADENO
CL2001032015AA (testset)ADENO0.453640.54636 other
CL2001032016AA (testset)ADENO0.984980.01502 ADENO
CL2001032019AA (testset)ADENO0.986180.01382 ADENO
CL2001032020AA (testset)ADENO0.999130.00087 ADENO
CL2001032025AA (testset)ADENO0.992450.00755 ADENO
CL2001032026AA (testset)ADENO0.991010.00899 ADENO
CL2001032027AA (testset)ADENO0.998080.00192 ADENO
CL2001032030AA (testset)ADENO0.913150.08685 ADENO
CL2001032031AA (testset)ADENO0.967360.03264 ADENO
CL2001032032AA (testset)ADENO0.904650.09535 ADENO
CL2001032034AA (testset)ADENO0.928240.07176 ADENO
CL2001032036AA (testset)ADENO0.000810.99919 other
CL2001032041AA (testset)other0.377070.62293 other
CL2001032043AA (testset)other0.489120.51088 other
CL2001032044AA (testset)other0.001130.99887 other
CL2001032045AA (testset)other0.381280.61872 other
CL2001032046AA (testset)other0.387520.61248 other
CL2001032101AA (testset)other4e-040.9996 other
CL2001032102AA (testset)other0.661450.33855 ADENO
CL2001032103AA (testset)ADENO0.875280.12472 ADENO
CL2001032104AA (testset)ADENO0.999780.00022 ADENO
CL2001032105AA (testset)ADENO0.999330.00067 ADENO
CL2001032107AA (testset)ADENO0.99520.0048 ADENO
CL2001032108AA (testset)ADENO0.987330.01267 ADENO
CL2001032109AA (testset)ADENO0.894980.10502 ADENO
CL2001032110AA (testset)ADENO0.95910.0409 ADENO
CL2001032111AA (testset)ADENO0.974760.02524 ADENO
CL2001032113AA (testset)ADENO0.569150.43085 ADENO
CL2001032114AA (testset)ADENO0.986950.01305 ADENO
CL2001032115AA (testset)ADENO0.757020.24298 ADENO
CL2001032116AA (testset)ADENO0.996010.00399 ADENO
CL2001032117AA (testset)ADENO0.996740.00326 ADENO
CL2001032121AA (testset)other0.573690.42631 ADENO
CL2001032122AA (testset)other0.892570.10743 ADENO
CL2001032124AA (testset)other0.002530.99747 other
CL2001032125AA (testset)ADENO0.058230.94177 other
CL2001032127AA (testset)other0.000170.99983 other
CL2001032128AA (testset)other0.521720.47828 ADENO
CL2001032129AA (testset)other0.073180.92682 other
CL2001032130AA (testset)ADENO0.999690.00031 ADENO
CL2001032132AA (testset)ADENO0.98850.0115 ADENO
CL2001032134AA (testset)ADENO0.981230.01877 ADENO
CL2001032135AA (testset)ADENO0.990670.00933 ADENO
CL2001032136AA (testset)ADENO0.956190.04381 ADENO
CL2001032138AA (testset)ADENO0.996770.00323 ADENO
CL2001032141AA (testset)ADENO0.859680.14032 ADENO
CL2001032142AA (testset)ADENO0.698360.30164 ADENO
CL2001032144AA (testset)other0.025660.97434 other
CL2001032145AA (testset)other0.000680.99932 other
CL2001032147AA (testset)other0.607960.39204 ADENO
CL2001032149AA (testset)ADENO0.998880.00112 ADENO
CL2001032151AA (testset)other0.000270.99973 other
CL2001032152AA (testset)other0.003820.99618 other
CL2001032153AA (testset)other0.123180.87682 other
CL2001032155AA (testset)ADENO0.990890.00911 ADENO
CL2001032156AA (testset)ADENO0.704250.29575 ADENO
CL2001032202AA (testset)other0.481780.51822 other
CL2001032206AA (testset)other0.510190.48981 ADENO
CL2001032207AA (testset)other0.076870.92313 other
CL2001032209AA (testset)other0.518470.48153 ADENO
CL2001032210AA (testset)other0.005190.99481 other
CL2001032211AA (testset)ADENO0.984820.01518 ADENO
CL2001032212AA (testset)ADENO0.98930.0107 ADENO
CL2001032213AA (testset)ADENO0.255210.74479 other
CL2001032214AA (testset)ADENO0.98720.0128 ADENO
CL2001032217AA (testset)other0.087190.91281 other
CL2001032218AA (testset)other0.087940.91206 other
CL2001032219AA (testset)other7e-050.99993 other
CL2001032220AA (testset)other0.448990.55101 other
CL2001032222AA (testset)other0.96550.0345 ADENO
CL2001032229AA (testset)ADENO0.973110.02689 ADENO
CL2001032231AA (testset)other0.230470.76953 other
CL2001032232AA (testset)ADENO0.999410.00059 ADENO
CL2001032233AA (testset)ADENO0.998430.00157 ADENO
CL2001032238AA (testset)other0.036190.96381 other
CL2001032239AA (testset)other0.027540.97246 other
CL2001032240AA (testset)other0.11260.8874 other
CL2001032241AA (testset)ADENO0.997010.00299 ADENO
CL2001032242AA (testset)ADENO0.996780.00322 ADENO
CL2001032243AA (testset)ADENO0.986050.01395 ADENO
CL2001032248AA (testset)ADENO0.99370.0063 ADENO
CL2001032249AA (testset)ADENO0.99520.0048 ADENO
CL2001032252AA (testset)ADENO0.991420.00858 ADENO
CL2001032254AA (testset)ADENO0.999480.00052 ADENO
CL2001032255AA (testset)ADENO0.965460.03454 ADENO
CL2001032256AA (testset)other0.937050.06295 ADENO
CL2001032259AA (testset)ADENO0.985160.01484 ADENO
CL2001032260AA (testset)other0.004350.99565 other
CL2001032301AA (testset)ADENO0.927890.07211 ADENO
CL2001032304AA (testset)other0.413780.58622 other
CL2001032305AA (testset)other0.321490.67851 other
CL2001032306AA (testset)ADENO0.991340.00866 ADENO
CL2001032307AA (testset)ADENO0.98080.0192 ADENO
CL2001032308AA (testset)ADENO0.638450.36155 ADENO
CL2001032309AA (testset)ADENO0.995760.00424 ADENO
CL2001032310AA (testset)ADENO0.96930.0307 ADENO
CL2001032311AA (testset)ADENO0.982690.01731 ADENO
CL2001032312AA (testset)ADENO0.997910.00209 ADENO
CL2001032313AA (testset)ADENO0.827380.17262 ADENO
CL2001032314AA (testset)ADENO0.984440.01556 ADENO
CL2001032316AA (testset)ADENO0.877640.12236 ADENO
CL2001032601AA (testset)ADENO0.982430.01757 ADENO
CL2001032602AA (testset)ADENO0.983040.01696 ADENO
CL2001032604AA (testset)ADENO0.991660.00834 ADENO
CL2001032607AA (testset)other4e-050.99996 other
CL2001032608AA (testset)other0.220710.77929 other
CL2001032610AA (testset)ADENO0.994150.00585 ADENO
CL2001032612AA (testset)ADENO0.997610.00239 ADENO
CL2001032613AA (testset)ADENO0.978810.02119 ADENO
CL2001032614AA (testset)ADENO0.996390.00361 ADENO
CL2001032616AA (testset)ADENO0.920370.07963 ADENO
CL2001032617AA (testset)ADENO0.944920.05508 ADENO
CL2001032620AA (testset)ADENO0.963610.03639 ADENO
CL2001032625AA (testset)ADENO0.922290.07771 ADENO
CL2001032627AA (testset)other0.040470.95953 other
CL2001032628AA (testset)ADENO0.999630.00037 ADENO
CL2001032629AA (testset)other0.004930.99507 other
CL2001032630AA (testset)other1e-050.99999 other
CL2001032632AA (testset)other0.311220.68878 other
CL2001032638AA (testset)ADENO0.99250.0075 ADENO
CL2001032640AA (testset)ADENO0.997920.00208 ADENO
CL2001032643AA (testset)ADENO0.967480.03252 ADENO
CL2001032644AA (testset)other0.550690.44931 ADENO
CL2001032647AA (testset)ADENO0.950020.04998 ADENO
CL2001032701AA (testset)ADENO0.996460.00354 ADENO
CL2001032702AA (testset)ADENO0.99982e-04 ADENO
CL2001032703AA (testset)ADENO0.997130.00287 ADENO
CL2001032704AA (testset)ADENO0.993980.00602 ADENO
CL2001032706AA (testset)ADENO0.99770.0023 ADENO
CL2001032709AA (testset)ADENO0.989320.01068 ADENO
CL2001032716AA (testset)ADENO0.788090.21191 ADENO
CL2001032717AA (testset)ADENO0.967780.03222 ADENO
CL2001032718AA (testset)other0.087680.91232 other
CL2001032719AA (testset)other0.015150.98485 other
CL2001032720AA (testset)other0.025640.97436 other
CL2001032722AA (testset)other0.0050.995 other
CL2001032724AA (testset)other0.952020.04798 ADENO
CL2001032725AA (testset)other0.386930.61307 other
CL2001032727AA (testset)other0.767730.23227 ADENO
CL2001032729AA (testset)ADENO0.996240.00376 ADENO
CL2001032730AA (testset)ADENO0.996080.00392 ADENO
CL2001032732AA (testset)other0.969320.03068 ADENO
CL2001032733AA (testset)ADENO0.975370.02463 ADENO
CL2001032738AA (testset)ADENO0.998930.00107 ADENO
CL2001032742AA (testset)ADENO0.870750.12925 ADENO
CL2001032746AA (testset)ADENO0.998340.00166 ADENO
CL2001032747AA (testset)ADENO0.962550.03745 ADENO
CL2001032833AA (testset)ADENO0.994190.00581 ADENO
CL2001032836AA (testset)ADENO0.993640.00636 ADENO
CL2001032838AA (testset)ADENO0.996120.00388 ADENO
CL2001032839AA (testset)ADENO0.146410.85359 other
CL2001032841AA (testset)ADENO0.995820.00418 ADENO
CL2001032842AA (testset)ADENO0.988050.01195 ADENO
CL2001032843AA (testset)ADENO0.992490.00751 ADENO
CL2001032845AA (testset)ADENO0.836410.16359 ADENO
CL2001032846AA (testset)ADENO0.999390.00061 ADENO
CL2001032847AA (testset)other0.000170.99983 other
CL2001032848AA (testset)ADENO0.520180.47982 ADENO
CL2001032850AA (testset)other0.002280.99772 other
CL2001032853AA (testset)other0.048530.95147 other
CL2001032854AA (testset)other0.005210.99479 other
CL2001032856AA (testset)ADENO0.985070.01493 ADENO
CL2001032857AA (testset)ADENO0.912420.08758 ADENO
CL2001032860AA (testset)other1e-050.99999 other
CL2001040305AA (testset)ADENO0.962270.03773 ADENO
CL2001040306AA (testset)ADENO0.950520.04948 ADENO
CL2001041708AA (testset)ADENO0.990430.00957 ADENO
CL2001041711AA (testset)ADENO0.969260.03074 ADENO
CL2001041716AA (testset)ADENO0.994640.00536 ADENO
CL2001042501AA (testset)other8e-050.99992 other
CL2001042505AA (testset)ADENO0.97540.0246 ADENO
CL2001042506AA (testset)ADENO0.844450.15555 ADENO

 


Generated by StAM on Tue Sep 7 18:09:46 2004